RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 NIPSNAP2O75323 286 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 ATP6AP2O75787 350 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 MLYCDO95822 493 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 C1SP09871 688 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 CYP2A6P11509 494 aaPredicted RBP13.9□□□□□ -0.18
HMGA1-203ENST00000374116 CNR2P34972 360 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 RPS21P63220 83 aaKnown RBP13.9□□□□□ -0.18
HMGA1-203ENST00000374116 TRAP1Q12931 704 aaKnown RBP13.9□□□□□ -0.18
HMGA1-203ENST00000374116 ARHGEF7Q14155 803 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 TRIM25Q14258 630 aaKnown RBP13.9□□□□□ -0.18
HMGA1-203ENST00000374116 CERS6Q6ZMG9 384 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 Q6ZVL8 140 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 TAS2R42Q7RTR8 314 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 AMIGO2Q86SJ2 522 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 SIDT2Q8NBJ9 832 aaKnown RBP13.9□□□□□ -0.18
HMGA1-203ENST00000374116 CD200R1Q8TD46 325 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 ADAMTS16Q8TE57 1224 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 PIGKQ92643 395 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.9□□□□□ -0.184e-6■■■■■ 48.1
HMGA1-203ENST00000374116 ROPN1LQ96C74 230 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 ORAI3Q9BRQ5 295 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 NUSAP1Q9BXS6 441 aaKnown RBP13.9□□□□□ -0.18
HMGA1-203ENST00000374116 GPR63Q9BZJ6 419 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 CAAP1Q9H8G2 361 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 ZFYVE1Q9HBF4 777 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 SPAG4Q9NPE6 437 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 MBNL1Q9NR56 388 aaKnown RBP13.9□□□□□ -0.18
HMGA1-203ENST00000374116 PCDHB1Q9Y5F3 818 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 SLC30A1Q9Y6M5 507 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 TRBV5-4A0A0C4DH59 114 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 TRIM64BA6NI03 449 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 PATE3B3GLJ2 98 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 E5RI56 91 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 E7ENX8 843 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 CRCPO75575 148 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 RECQL5O94762 991 aaPredicted RBP13.9□□□□□ -0.18
HMGA1-203ENST00000374116 H6PDO95479 791 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 EIF2S1P05198 315 aaKnown RBP13.9□□□□□ -0.18
HMGA1-203ENST00000374116 ALDOCP09972 364 aaKnown RBP13.9□□□□□ -0.18
HMGA1-203ENST00000374116 LBPP18428 481 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 CHRM3P20309 590 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 FOXA1P55317 472 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 MRPS22P82650 360 aaKnown RBP13.9□□□□□ -0.18
HMGA1-203ENST00000374116 SGCGQ13326 291 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 C16orf72Q14CZ0 275 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 KIF19Q2TAC6 998 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 LYSMD4Q5XG99 296 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 C8orf82Q6P1X6 216 aaPredicted RBP13.9□□□□□ -0.18
HMGA1-203ENST00000374116 PAOXQ6QHF9 649 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 TRIM69Q86WT6 500 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 CARM1Q86X55 608 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 GPSM1Q86YR5 675 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 PHYKPLQ8IUZ5 450 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 DDIASQ8IXT1 998 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 MIER2Q8N344 545 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 CBARPQ8N350 705 aaPredicted RBP13.9□□□□□ -0.18
HMGA1-203ENST00000374116 RNF148Q8N7C7 305 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 PCYOX1LQ8NBM8 494 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 CADM4Q8NFZ8 388 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 SCAMP4Q969E2 229 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 LINGO1Q96FE5 620 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 ZC3H10Q96K80 434 aaKnown RBP13.9□□□□□ -0.18
HMGA1-203ENST00000374116 SLC6A18Q96N87 628 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 NEURL2Q9BR09 285 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 CROTQ9UKG9 612 aa13.9□□□□□ -0.18
HMGA1-203ENST00000374116 TNRC6BQ9UPQ9 1833 aaKnown RBP13.9□□□□□ -0.18
HMGA1-203ENST00000374116 A0A1W2PPC4 97 aa13.89□□□□□ -0.19
HMGA1-203ENST00000374116 H3BNH8 94 aa13.89□□□□□ -0.19
HMGA1-203ENST00000374116 K7ESM1 405 aa13.89□□□□□ -0.19
HMGA1-203ENST00000374116 LATO43561 262 aa13.89□□□□□ -0.19
HMGA1-203ENST00000374116 SNX2O60749 519 aa13.89□□□□□ -0.19
HMGA1-203ENST00000374116 INHBBP09529 407 aa13.89□□□□□ -0.19
HMGA1-203ENST00000374116 RPS3P23396 243 aaKnown RBP eCLIP13.89□□□□□ -0.191e-13■■□□□ 12.1
HMGA1-203ENST00000374116 CA5AP35218 305 aa13.89□□□□□ -0.19
HMGA1-203ENST00000374116 MSX2P35548 267 aaPredicted RBP13.89□□□□□ -0.19
HMGA1-203ENST00000374116 STT3AP46977 705 aa13.89□□□□□ -0.19
HMGA1-203ENST00000374116 CLCN7P51798 805 aa13.89□□□□□ -0.19
HMGA1-203ENST00000374116 RPS3AP61247 264 aaKnown RBP13.89□□□□□ -0.19
HMGA1-203ENST00000374116 CDKL1Q00532 357 aa13.89□□□□□ -0.19
HMGA1-203ENST00000374116 SAMD4BQ5PRF9 694 aaKnown RBP13.89□□□□□ -0.19
HMGA1-203ENST00000374116 KIAA1161Q6NSJ0 714 aa13.89□□□□□ -0.19
HMGA1-203ENST00000374116 IYDQ6PHW0 289 aa13.89□□□□□ -0.19
HMGA1-203ENST00000374116 GPR180Q86V85 440 aa13.89□□□□□ -0.19
HMGA1-203ENST00000374116 FUNDC1Q8IVP5 155 aa13.89□□□□□ -0.19
HMGA1-203ENST00000374116 SUMF1Q8NBK3 374 aa13.89□□□□□ -0.19
HMGA1-203ENST00000374116 PLA2G15Q8NCC3 412 aa13.89□□□□□ -0.19
HMGA1-203ENST00000374116 EEF1AKMT1Q8WVE0 214 aa13.89□□□□□ -0.19
HMGA1-203ENST00000374116 PDLIM5Q96HC4 596 aaKnown RBP13.89□□□□□ -0.19
HMGA1-203ENST00000374116 ZNF597Q96LX8 424 aa13.89□□□□□ -0.19
HMGA1-203ENST00000374116 C1QTNF2Q9BXJ5 285 aa13.89□□□□□ -0.19
HMGA1-203ENST00000374116 ARRDC1-AS1Q9H2J1 176 aa13.89□□□□□ -0.19
HMGA1-203ENST00000374116 TUBB1Q9H4B7 451 aa13.89□□□□□ -0.19
HMGA1-203ENST00000374116 IL26Q9NPH9 171 aa13.89□□□□□ -0.19
HMGA1-203ENST00000374116 SEMA4BQ9NPR2 832 aaPredicted RBP13.89□□□□□ -0.19
HMGA1-203ENST00000374116 PNPLA3Q9NST1 481 aa13.89□□□□□ -0.19
HMGA1-203ENST00000374116 GNPTGQ9UJJ9 305 aa13.89□□□□□ -0.19
HMGA1-203ENST00000374116 PCTPQ9UKL6 214 aa13.89□□□□□ -0.19
HMGA1-203ENST00000374116 B3GNT3Q9Y2A9 372 aa13.89□□□□□ -0.19
HMGA1-203ENST00000374116 NDUFAF1Q9Y375 327 aa13.89□□□□□ -0.19
HMGA1-203ENST00000374116 PI4KAP42356 2102 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms