RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 ESX1Q8N693 406 aa21.59■■□□□ 1.05
ECHDC1-203ENST00000368291 PPM1NQ8N819 430 aa21.59■■□□□ 1.05
ECHDC1-203ENST00000368291 SLC38A9Q8NBW4 561 aa21.59■■□□□ 1.05
ECHDC1-203ENST00000368291 OR2L3Q8NG85 312 aa21.59■■□□□ 1.05
ECHDC1-203ENST00000368291 GPR22Q99680 433 aa21.59■■□□□ 1.05
ECHDC1-203ENST00000368291 MIPEPQ99797 713 aa21.59■■□□□ 1.05
ECHDC1-203ENST00000368291 PARVBQ9HBI1 364 aa21.59■■□□□ 1.05
ECHDC1-203ENST00000368291 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.59■■□□□ 1.05
ECHDC1-203ENST00000368291 LHX6Q9UPM6 363 aa21.59■■□□□ 1.05
ECHDC1-203ENST00000368291 KLK4Q9Y5K2 254 aa21.59■■□□□ 1.05
ECHDC1-203ENST00000368291 CCDC88CQ9P219 2028 aa21.58■■□□□ 1.04
ECHDC1-203ENST00000368291 SLC16A5O15375 505 aa21.58■■□□□ 1.04
ECHDC1-203ENST00000368291 LIFP15018 202 aa21.58■■□□□ 1.04
ECHDC1-203ENST00000368291 HSD17B2P37059 387 aa21.58■■□□□ 1.04
ECHDC1-203ENST00000368291 STAT5AP42229 794 aa21.58■■□□□ 1.04
ECHDC1-203ENST00000368291 VAC14Q08AM6 782 aa21.58■■□□□ 1.04
ECHDC1-203ENST00000368291 ABHD18Q0P651 414 aa21.58■■□□□ 1.04
ECHDC1-203ENST00000368291 FIGLAQ6QHK4 219 aa21.58■■□□□ 1.04
ECHDC1-203ENST00000368291 C6orf15Q6UXA7 325 aaPredicted RBP21.58■■□□□ 1.04
ECHDC1-203ENST00000368291 CCDC81Q6ZN84 652 aa21.58■■□□□ 1.04
ECHDC1-203ENST00000368291 MBOAT1Q6ZNC8 495 aa21.58■■□□□ 1.04
ECHDC1-203ENST00000368291 TMEM126BQ8IUX1 230 aa21.58■■□□□ 1.04
ECHDC1-203ENST00000368291 ANKRD49Q8WVL7 239 aa21.58■■□□□ 1.04
ECHDC1-203ENST00000368291 SMPDL3AQ92484 453 aa21.58■■□□□ 1.04
ECHDC1-203ENST00000368291 ACAT2Q9BWD1 397 aa21.58■■□□□ 1.04
ECHDC1-203ENST00000368291 CDC42EP4Q9H3Q1 356 aaKnown RBP21.58■■□□□ 1.04
ECHDC1-203ENST00000368291 AKIRIN1Q9H9L7 192 aaPredicted RBP21.58■■□□□ 1.04
ECHDC1-203ENST00000368291 CAB39LQ9H9S4 337 aa21.58■■□□□ 1.04
ECHDC1-203ENST00000368291 FANCEQ9HB96 536 aa21.58■■□□□ 1.04
ECHDC1-203ENST00000368291 STOX2Q9P2F5 926 aaPredicted RBP21.58■■□□□ 1.04
ECHDC1-203ENST00000368291 PCDHB3Q9Y5E6 796 aa21.58■■□□□ 1.04
ECHDC1-203ENST00000368291 MAP3K7O43318 606 aa21.57■■□□□ 1.04
ECHDC1-203ENST00000368291 NRP2O60462 931 aa21.57■■□□□ 1.04
ECHDC1-203ENST00000368291 SCRG1O75711 98 aa21.57■■□□□ 1.04
ECHDC1-203ENST00000368291 CYP2A7P20853 494 aa21.57■■□□□ 1.04
ECHDC1-203ENST00000368291 POU4F1Q01851 419 aa21.57■■□□□ 1.04
ECHDC1-203ENST00000368291 ILF2Q12905 390 aaKnown RBP21.57■■□□□ 1.04
ECHDC1-203ENST00000368291 ARHGAP40Q5TG30 622 aa21.57■■□□□ 1.04
ECHDC1-203ENST00000368291 MCOLN3Q8TDD5 553 aa21.57■■□□□ 1.04
ECHDC1-203ENST00000368291 SLC6A20Q9NP91 592 aa21.57■■□□□ 1.04
ECHDC1-203ENST00000368291 TXNDC16Q9P2K2 825 aa21.57■■□□□ 1.04
ECHDC1-203ENST00000368291 SERTAD3Q9UJW9 196 aa21.57■■□□□ 1.04
ECHDC1-203ENST00000368291 TARM1B6A8C7 271 aa21.56■■□□□ 1.04
ECHDC1-203ENST00000368291 TERTO14746 1132 aaKnown RBP21.56■■□□□ 1.04
ECHDC1-203ENST00000368291 RHOXF2BP0C7M4 288 aa21.56■■□□□ 1.04
ECHDC1-203ENST00000368291 ITGA1P56199 1179 aa21.56■■□□□ 1.04
ECHDC1-203ENST00000368291 ZXDCQ2QGD7 858 aaPredicted RBP21.56■■□□□ 1.04
ECHDC1-203ENST00000368291 GRTP1Q5TC63 336 aa21.56■■□□□ 1.04
ECHDC1-203ENST00000368291 CEP128Q6ZU80 1094 aa21.56■■□□□ 1.04
ECHDC1-203ENST00000368291 SYTL1Q8IYJ3 562 aa21.56■■□□□ 1.04
ECHDC1-203ENST00000368291 ZUFSPQ96AP4 578 aa21.56■■□□□ 1.04
ECHDC1-203ENST00000368291 CCDC138Q96M89 665 aa21.56■■□□□ 1.04
ECHDC1-203ENST00000368291 RHOXF2Q9BQY4 288 aa21.56■■□□□ 1.04
ECHDC1-203ENST00000368291 FUT8Q9BYC5 575 aa21.56■■□□□ 1.04
ECHDC1-203ENST00000368291 SPRTNQ9H040 489 aaPredicted RBP21.56■■□□□ 1.04
ECHDC1-203ENST00000368291 TSPYL1Q9H0U9 437 aa21.56■■□□□ 1.04
ECHDC1-203ENST00000368291 POPDC3Q9HBV1 291 aa21.56■■□□□ 1.04
ECHDC1-203ENST00000368291 INTS7Q9NVH2 962 aaKnown RBP21.56■■□□□ 1.04
ECHDC1-203ENST00000368291 NFU1Q9UMS0 254 aa21.56■■□□□ 1.04
ECHDC1-203ENST00000368291 IGKV1-8A0A0C4DH67 115 aa21.55■■□□□ 1.04
ECHDC1-203ENST00000368291 ZNF839A8K0R7 811 aa21.55■■□□□ 1.04
ECHDC1-203ENST00000368291 CTSVO60911 334 aa21.55■■□□□ 1.04
ECHDC1-203ENST00000368291 CPNE3O75131 537 aaKnown RBP21.55■■□□□ 1.04
ECHDC1-203ENST00000368291 F8A1P23610 371 aa21.55■■□□□ 1.04
ECHDC1-203ENST00000368291 GPS2Q13227 327 aa21.55■■□□□ 1.04
ECHDC1-203ENST00000368291 NAB1Q13506 487 aa21.55■■□□□ 1.04
ECHDC1-203ENST00000368291 SBSNQ6UWP8 590 aa21.55■■□□□ 1.04
ECHDC1-203ENST00000368291 ZNF517Q6ZMY9 492 aaPredicted RBP21.55■■□□□ 1.04
ECHDC1-203ENST00000368291 NKAPQ8N5F7 415 aaKnown RBP21.55■■□□□ 1.04
ECHDC1-203ENST00000368291 LHX9Q9NQ69 397 aa21.55■■□□□ 1.04
ECHDC1-203ENST00000368291 EURLQ9NYK6 297 aa21.55■■□□□ 1.04
ECHDC1-203ENST00000368291 TAC3Q9UHF0 121 aa21.55■■□□□ 1.04
ECHDC1-203ENST00000368291 PLCL2Q9UPR0 1127 aa21.55■■□□□ 1.04
ECHDC1-203ENST00000368291 PCDHGA4Q9Y5G9 962 aa21.55■■□□□ 1.04
ECHDC1-203ENST00000368291 PHGDHO43175 533 aaKnown RBP21.54■■□□□ 1.04
ECHDC1-203ENST00000368291 MT-ND3P03897 115 aa21.54■■□□□ 1.04
ECHDC1-203ENST00000368291 RPA3P35244 121 aaPredicted RBP21.54■■□□□ 1.04
ECHDC1-203ENST00000368291 SPRP35270 261 aaPredicted RBP21.54■■□□□ 1.04
ECHDC1-203ENST00000368291 RORAP35398 523 aa21.54■■□□□ 1.04
ECHDC1-203ENST00000368291 TSTA3Q13630 321 aaPredicted RBP21.54■■□□□ 1.04
ECHDC1-203ENST00000368291 USP10Q14694 798 aaKnown RBP21.54■■□□□ 1.04
ECHDC1-203ENST00000368291 ZKSCAN8Q15776 578 aaPredicted RBP21.54■■□□□ 1.04
ECHDC1-203ENST00000368291 PPP1R3AQ16821 1122 aa21.54■■□□□ 1.04
ECHDC1-203ENST00000368291 ICE2Q659A1 982 aa21.54■■□□□ 1.04
ECHDC1-203ENST00000368291 GPR155Q7Z3F1 870 aa21.54■■□□□ 1.04
ECHDC1-203ENST00000368291 ANKRD7Q92527 254 aa21.54■■□□□ 1.04
ECHDC1-203ENST00000368291 LRFN5Q96NI6 719 aa21.54■■□□□ 1.04
ECHDC1-203ENST00000368291 DPH7Q9BTV6 452 aa21.54■■□□□ 1.04
ECHDC1-203ENST00000368291 GPAMQ9HCL2 828 aa21.54■■□□□ 1.04
ECHDC1-203ENST00000368291 IL17BQ9UHF5 180 aa21.54■■□□□ 1.04
ECHDC1-203ENST00000368291 PADI1Q9ULC6 663 aa21.54■■□□□ 1.04
ECHDC1-203ENST00000368291 OR2A25A4D2G3 310 aa21.53■■□□□ 1.04
ECHDC1-203ENST00000368291 E7EQ34 232 aa21.53■■□□□ 1.04
ECHDC1-203ENST00000368291 CDC7O00311 574 aa21.53■■□□□ 1.04
ECHDC1-203ENST00000368291 ZNF749O43361 778 aa21.53■■□□□ 1.04
ECHDC1-203ENST00000368291 ZNF500O60304 480 aaPredicted RBP21.53■■□□□ 1.04
ECHDC1-203ENST00000368291 CMPK1P30085 196 aa21.53■■□□□ 1.04
ECHDC1-203ENST00000368291 TBPL1P62380 186 aa21.53■■□□□ 1.04
ECHDC1-203ENST00000368291 PRDX1Q06830 199 aaKnown RBP21.53■■□□□ 1.04
ECHDC1-203ENST00000368291 FAM199XQ6PEV8 388 aaPredicted RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms