RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 LAYNQ6UX15 382 aa16.51■□□□□ 0.23
TPM1-205ENST00000357980 SLCO4C1Q6ZQN7 724 aa16.51■□□□□ 0.23
TPM1-205ENST00000357980 MIPEPQ99797 713 aa16.51■□□□□ 0.23
TPM1-205ENST00000357980 RIC8BQ9NVN3 520 aa16.51■□□□□ 0.23
TPM1-205ENST00000357980 G3BP2Q9UN86 482 aaKnown RBP16.51■□□□□ 0.23
TPM1-205ENST00000357980 KNL1Q8NG31 2342 aa16.5■□□□□ 0.23
TPM1-205ENST00000357980 THADAQ6YHU6 1953 aa16.5■□□□□ 0.23
TPM1-205ENST00000357980 ULK1O75385 1050 aa16.5■□□□□ 0.23
TPM1-205ENST00000357980 KRT6AP02538 564 aa16.5■□□□□ 0.23
TPM1-205ENST00000357980 KRT6BP04259 564 aa16.5■□□□□ 0.23
TPM1-205ENST00000357980 F3P13726 295 aa16.5■□□□□ 0.23
TPM1-205ENST00000357980 LBPP18428 481 aa16.5■□□□□ 0.23
TPM1-205ENST00000357980 KRT6CP48668 564 aa16.5■□□□□ 0.23
TPM1-205ENST00000357980 DOC2AQ14183 400 aa16.5■□□□□ 0.23
TPM1-205ENST00000357980 NAA25Q14CX7 972 aa16.5■□□□□ 0.23
TPM1-205ENST00000357980 ZRSR2Q15696 482 aaKnown RBP16.5■□□□□ 0.23
TPM1-205ENST00000357980 XKR6Q5GH73 641 aa16.5■□□□□ 0.23
TPM1-205ENST00000357980 ASRGL1Q7L266 308 aa16.5■□□□□ 0.23
TPM1-205ENST00000357980 SFRP1Q8N474 314 aa16.5■□□□□ 0.23
TPM1-205ENST00000357980 LINC01555Q8NAE3 123 aa16.5■□□□□ 0.23
TPM1-205ENST00000357980 SETD7Q8WTS6 366 aaKnown RBP16.5■□□□□ 0.23
TPM1-205ENST00000357980 DNASE2BQ8WZ79 361 aa16.5■□□□□ 0.23
TPM1-205ENST00000357980 SLC7A6OSQ96CW6 309 aaPredicted RBP16.5■□□□□ 0.23
TPM1-205ENST00000357980 WDR34Q96EX3 536 aa16.5■□□□□ 0.23
TPM1-205ENST00000357980 DUSP15Q9H1R2 295 aaPredicted RBP16.5■□□□□ 0.23
TPM1-205ENST00000357980 TM9SF3Q9HD45 589 aa16.5■□□□□ 0.23
TPM1-205ENST00000357980 TAGLN3Q9UI15 199 aa16.5■□□□□ 0.23
TPM1-205ENST00000357980 ZNF490Q9ULM2 529 aaPredicted RBP16.5■□□□□ 0.23
TPM1-205ENST00000357980 TDRD6O60522 2096 aaKnown RBP16.5■□□□□ 0.23
TPM1-205ENST00000357980 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 PRAMEF33A0A0G2JMD5 474 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 ZNF839A8K0R7 811 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 CLGNO14967 610 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 LSM1O15116 133 aaKnown RBP16.49■□□□□ 0.23
TPM1-205ENST00000357980 MAP3K13O43283 966 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 PKLRP30613 574 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 RAB28P51157 221 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 ACTN3Q08043 901 aaPredicted RBP16.49■□□□□ 0.23
TPM1-205ENST00000357980 TSTA3Q13630 321 aaPredicted RBP16.49■□□□□ 0.23
TPM1-205ENST00000357980 ZNF542PQ5EBM4 170 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 PRAMEF14Q5SWL7 426 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 PRAMEF13Q5VWM6 474 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 GRHL2Q6ISB3 625 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 LCTLQ6UWM7 567 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 TMEFF1Q8IYR6 380 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 PHACTR4Q8IZ21 702 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 HMGCLL1Q8TB92 370 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 RAB11FIP5Q9BXF6 653 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 EHD1Q9H4M9 534 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 KIR3DX1Q9H7L2 352 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 MRGBPQ9NV56 204 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 ZNF624Q9P2J8 865 aaPredicted RBP16.49■□□□□ 0.23
TPM1-205ENST00000357980 SNX6Q9UNH7 406 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 RRP15Q9Y3B9 282 aaKnown RBP16.49■□□□□ 0.23
TPM1-205ENST00000357980 SPAG17Q6Q759 2223 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 A0A1W2PPV9 198 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 H0YIV9 168 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 HNRNPCL1O60812 293 aaKnown RBP16.49■□□□□ 0.23
TPM1-205ENST00000357980 PEX11AO75192 247 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 PDYNP01213 254 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 CELA2BP08218 269 aaPredicted RBP16.49■□□□□ 0.23
TPM1-205ENST00000357980 ESRRAP11474 423 aaPredicted RBP16.49■□□□□ 0.23
TPM1-205ENST00000357980 CD1EP15812 388 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 PIK3R1P27986 724 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 HNF4AP41235 474 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 ATP4BP51164 291 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 BLKP51451 505 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 CORO7P57737 925 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 SQLEQ14534 574 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 C6orf136Q5SQH8 315 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 FRG2Q64ET8 278 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 TMPRSS11BQ86T26 416 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 C2orf73Q8N5S3 287 aaPredicted RBP16.49■□□□□ 0.23
TPM1-205ENST00000357980 OR52E1Q8NGJ3 308 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 SMPDL3AQ92484 453 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 FRG2BQ96QU4 278 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 GSDMCQ9BYG8 508 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 LRMDAQ9H2I8 198 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 ICKQ9UPZ9 632 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 DYRK1BQ9Y463 629 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 COLEC10Q9Y6Z7 277 aa16.49■□□□□ 0.23
TPM1-205ENST00000357980 SERTM1A2A2V5 107 aa16.48■□□□□ 0.23
TPM1-205ENST00000357980 TLR4O00206 839 aa16.48■□□□□ 0.23
TPM1-205ENST00000357980 SLC28A1O00337 649 aa16.48■□□□□ 0.23
TPM1-205ENST00000357980 NDUFS1P28331 727 aa16.48■□□□□ 0.23
TPM1-205ENST00000357980 PRDX6P30041 224 aa16.48■□□□□ 0.23
TPM1-205ENST00000357980 FNTBP49356 437 aa16.48■□□□□ 0.23
TPM1-205ENST00000357980 ERVK-8P63133 956 aa16.48■□□□□ 0.23
TPM1-205ENST00000357980 KRT33BQ14525 404 aa16.48■□□□□ 0.23
TPM1-205ENST00000357980 ATP6AP1LQ52LC2 224 aa16.48■□□□□ 0.23
TPM1-205ENST00000357980 SGO1Q5FBB7 561 aa16.48■□□□□ 0.23
TPM1-205ENST00000357980 ATG9BQ674R7 924 aa16.48■□□□□ 0.23
TPM1-205ENST00000357980 SPATA19Q7Z5L4 167 aa16.48■□□□□ 0.23
TPM1-205ENST00000357980 RAB42Q8N4Z0 105 aa16.48■□□□□ 0.23
TPM1-205ENST00000357980 SLC5A11Q8WWX8 675 aa16.48■□□□□ 0.23
TPM1-205ENST00000357980 HAUS8Q9BT25 410 aa16.48■□□□□ 0.23
TPM1-205ENST00000357980 ACPTQ9BZG2 426 aa16.48■□□□□ 0.23
TPM1-205ENST00000357980 MIR1-1HGQ9H1L0 117 aa16.48■□□□□ 0.23
TPM1-205ENST00000357980 ELOVL6Q9H5J4 265 aa16.48■□□□□ 0.23
TPM1-205ENST00000357980 TAAR2Q9P1P5 351 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms