RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 DNAAF3Q8N9W5 541 aa15.14■□□□□ 0.01
DDX55-202ENST00000354291 ACBD4Q8NC06 268 aa15.14■□□□□ 0.01
DDX55-202ENST00000354291 OR5AR1Q8NGP9 310 aa15.14■□□□□ 0.01
DDX55-202ENST00000354291 FLVCR1-AS1Q8TAF5 88 aa15.14■□□□□ 0.01
DDX55-202ENST00000354291 SDCCAG3Q96C92 435 aa15.14■□□□□ 0.01
DDX55-202ENST00000354291 TSPAN10Q9H1Z9 355 aaPredicted RBP15.14■□□□□ 0.01
DDX55-202ENST00000354291 GBA3Q9H227 469 aa15.14■□□□□ 0.01
DDX55-202ENST00000354291 FAM96AQ9H5X1 160 aa15.14■□□□□ 0.01
DDX55-202ENST00000354291 STMN3Q9NZ72 180 aa15.14■□□□□ 0.01
DDX55-202ENST00000354291 CRLS1Q9UJA2 301 aa15.14■□□□□ 0.01
DDX55-202ENST00000354291 ZNF835Q9Y2P0 537 aa15.14■□□□□ 0.01
DDX55-202ENST00000354291 AAR2Q9Y312 384 aaKnown RBP15.14■□□□□ 0.01
DDX55-202ENST00000354291 JMJD1CQ15652 2540 aa15.13■□□□□ 0.01
DDX55-202ENST00000354291 RCCD1A6NED2 376 aa15.13■□□□□ 0.01
DDX55-202ENST00000354291 ZNHIT1O43257 154 aa15.13■□□□□ 0.01
DDX55-202ENST00000354291 SRP72O76094 671 aaKnown RBP15.13■□□□□ 0.01
DDX55-202ENST00000354291 BMP10O95393 424 aa15.13■□□□□ 0.01
DDX55-202ENST00000354291 CELA2AP08217 269 aa15.13■□□□□ 0.01
DDX55-202ENST00000354291 ATP1B2P14415 290 aaPredicted RBP15.13■□□□□ 0.01
DDX55-202ENST00000354291 FDXRP22570 491 aa15.13■□□□□ 0.01
DDX55-202ENST00000354291 PTPN7P35236 360 aa15.13■□□□□ 0.01
DDX55-202ENST00000354291 GRIA3P42263 894 aa15.13■□□□□ 0.01
DDX55-202ENST00000354291 GCGRP47871 477 aa15.13■□□□□ 0.01
DDX55-202ENST00000354291 OCA2Q04671 838 aa15.13■□□□□ 0.01
DDX55-202ENST00000354291 LONRF1Q17RB8 773 aa15.13■□□□□ 0.01
DDX55-202ENST00000354291 ATG9BQ674R7 924 aa15.13■□□□□ 0.01
DDX55-202ENST00000354291 CNSTQ6PJW8 725 aa15.13■□□□□ 0.01
DDX55-202ENST00000354291 NLRP9Q7RTR0 991 aa15.13■□□□□ 0.01
DDX55-202ENST00000354291 CDKL3Q8IVW4 592 aaPredicted RBP15.13■□□□□ 0.01
DDX55-202ENST00000354291 OR4K2Q8NGD2 314 aa15.13■□□□□ 0.01
DDX55-202ENST00000354291 ACTL9Q8TC94 416 aa15.13■□□□□ 0.01
DDX55-202ENST00000354291 STT3BQ8TCJ2 826 aa15.13■□□□□ 0.01
DDX55-202ENST00000354291 MIEF2Q96C03 454 aa15.13■□□□□ 0.01
DDX55-202ENST00000354291 OSBPL8Q9BZF1 889 aa15.13■□□□□ 0.01
DDX55-202ENST00000354291 TNFRSF10DQ9UBN6 386 aa15.13■□□□□ 0.01
DDX55-202ENST00000354291 FKBPLQ9UIM3 349 aa15.13■□□□□ 0.01
DDX55-202ENST00000354291 PLAGL1Q9UM63 463 aa15.13■□□□□ 0.01
DDX55-202ENST00000354291 ASF1AQ9Y294 204 aa15.13■□□□□ 0.01
DDX55-202ENST00000354291 ARL5AQ9Y689 179 aa15.13■□□□□ 0.01
DDX55-202ENST00000354291 DUSP10Q9Y6W6 482 aa15.13■□□□□ 0.01
DDX55-202ENST00000354291 MACROD2A1Z1Q3 448 aa15.12■□□□□ 0.01
DDX55-202ENST00000354291 OR5H15A6NDH6 313 aa15.12■□□□□ 0.01
DDX55-202ENST00000354291 C2orf81A6NN90 581 aa15.12■□□□□ 0.01
DDX55-202ENST00000354291 CFAP99D6REC4 459 aa15.12■□□□□ 0.01
DDX55-202ENST00000354291 NPIPA5E9PKD4 350 aa15.12■□□□□ 0.01
DDX55-202ENST00000354291 PJA2O43164 708 aa15.12■□□□□ 0.01
DDX55-202ENST00000354291 ZNF189O75820 626 aaPredicted RBP15.12■□□□□ 0.01
DDX55-202ENST00000354291 TJP3O95049 919 aa15.12■□□□□ 0.01
DDX55-202ENST00000354291 AGTP01019 485 aa15.12■□□□□ 0.01
DDX55-202ENST00000354291 ZGLP1P0C6A0 271 aa15.12■□□□□ 0.01
DDX55-202ENST00000354291 MAGP20916 626 aa15.12■□□□□ 0.01
DDX55-202ENST00000354291 EIF3EP60228 445 aaKnown RBP15.12■□□□□ 0.01
DDX55-202ENST00000354291 EEF1A2Q05639 463 aaKnown RBP15.12■□□□□ 0.01
DDX55-202ENST00000354291 PRPSAP1Q14558 356 aa15.12■□□□□ 0.01
DDX55-202ENST00000354291 GRM7Q14831 915 aa15.12■□□□□ 0.01
DDX55-202ENST00000354291 KRTCAP3Q53RY4 240 aa15.12■□□□□ 0.01
DDX55-202ENST00000354291 ABHD17BQ5VST6 288 aa15.12■□□□□ 0.01
DDX55-202ENST00000354291 DARS2Q6PI48 645 aaKnown RBP15.12■□□□□ 0.01
DDX55-202ENST00000354291 RANBP10Q6VN20 620 aa15.12■□□□□ 0.01
DDX55-202ENST00000354291 Q6ZPB1 254 aaPredicted RBP15.12■□□□□ 0.01
DDX55-202ENST00000354291 ARHGEF18Q6ZSZ5 1173 aa15.12■□□□□ 0.01
DDX55-202ENST00000354291 AGAP11Q8TF27 550 aa15.12■□□□□ 0.01
DDX55-202ENST00000354291 THAP3Q8WTV1 239 aaPredicted RBP15.12■□□□□ 0.01
DDX55-202ENST00000354291 GPR137Q96N19 417 aa15.12■□□□□ 0.01
DDX55-202ENST00000354291 PPP1R2P1Q96PQ5 205 aa15.12■□□□□ 0.01
DDX55-202ENST00000354291 COPS8Q99627 209 aa15.12■□□□□ 0.01
DDX55-202ENST00000354291 TREX2Q9BQ50 279 aaPredicted RBP15.12■□□□□ 0.01
DDX55-202ENST00000354291 ZNF559Q9BR84 538 aa15.12■□□□□ 0.01
DDX55-202ENST00000354291 C10orf88Q9H8K7 445 aa15.12■□□□□ 0.01
DDX55-202ENST00000354291 CCM2LQ9NUG4 571 aaPredicted RBP15.12■□□□□ 0.01
DDX55-202ENST00000354291 IL1RAPL1Q9NZN1 696 aa15.12■□□□□ 0.01
DDX55-202ENST00000354291 OR6C2Q9NZP2 312 aa15.12■□□□□ 0.01
DDX55-202ENST00000354291 NPIPA1Q9UND3 350 aa15.12■□□□□ 0.01
DDX55-202ENST00000354291 C5orf60A6NFR6 353 aa15.11■□□□□ 0.01
DDX55-202ENST00000354291 RBP3P10745 1247 aa15.11■□□□□ 0.01
DDX55-202ENST00000354291 COX6A1P12074 109 aa15.11■□□□□ 0.01
DDX55-202ENST00000354291 ABOP16442 354 aa15.11■□□□□ 0.01
DDX55-202ENST00000354291 CXCR2P25025 360 aa15.11■□□□□ 0.01
DDX55-202ENST00000354291 ALDH6A1Q02252 535 aaKnown RBP15.11■□□□□ 0.01
DDX55-202ENST00000354291 CACNG1Q06432 222 aa15.11■□□□□ 0.01
DDX55-202ENST00000354291 OLIG2Q13516 323 aa15.11■□□□□ 0.01
DDX55-202ENST00000354291 TAF1AQ15573 450 aaPredicted RBP15.11■□□□□ 0.01
DDX55-202ENST00000354291 ZNF766Q5HY98 468 aa15.11■□□□□ 0.01
DDX55-202ENST00000354291 ANKRD20A2Q5SQ80 823 aa15.11■□□□□ 0.01
DDX55-202ENST00000354291 ANKRD20A1Q5TYW2 823 aa15.11■□□□□ 0.01
DDX55-202ENST00000354291 ANKRD20A3Q5VUR7 823 aa15.11■□□□□ 0.01
DDX55-202ENST00000354291 TAOK1Q7L7X3 1001 aa15.11■□□□□ 0.01
DDX55-202ENST00000354291 LAPTM4BQ86VI4 370 aa15.11■□□□□ 0.01
DDX55-202ENST00000354291 AMER2Q8N7J2 671 aa15.11■□□□□ 0.01
DDX55-202ENST00000354291 TTC29Q8NA56 475 aaPredicted RBP15.11■□□□□ 0.01
DDX55-202ENST00000354291 LRRC45Q96CN5 670 aa15.11■□□□□ 0.01
DDX55-202ENST00000354291 FOXC2Q99958 501 aa15.11■□□□□ 0.01
DDX55-202ENST00000354291 FICDQ9BVA6 458 aa15.11■□□□□ 0.01
DDX55-202ENST00000354291 RBSNQ9H1K0 784 aa15.11■□□□□ 0.01
DDX55-202ENST00000354291 ZNF304Q9HCX3 659 aa15.11■□□□□ 0.01
DDX55-202ENST00000354291 COQ3Q9NZJ6 369 aa15.11■□□□□ 0.01
DDX55-202ENST00000354291 PPT2Q9UMR5 302 aa15.11■□□□□ 0.01
DDX55-202ENST00000354291 INTS1Q8N201 2190 aaKnown RBP15.11■□□□□ 0.01
DDX55-202ENST00000354291 FLNAP21333 2647 aaKnown RBP15.1■□□□□ 0.01
DDX55-202ENST00000354291 MLYCDO95822 493 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms