RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 EZRP15311 586 aaKnown RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 HOXC9P31274 260 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 SLC6A6P31641 620 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 PTGER4P35408 488 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 HTR6P50406 440 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 FKBP1BP68106 108 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 PRKCEQ02156 737 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 MAD2L1Q13257 205 aaPredicted RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 DHX34Q14147 1143 aaKnown RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 NONOQ15233 471 aaKnown RBP eCLIP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 LSM12Q3MHD2 195 aaKnown RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 RAB6CQ53S08 254 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 XKR3Q5GH77 459 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 TTC39AQ5SRH9 613 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 PRSS42Q7Z5A4 293 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 CHERPQ8IWX8 916 aaKnown RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 SAMD14Q8IZD0 417 aaPredicted RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 CCDC63Q8NA47 563 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 THAP8Q8NA92 274 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 SSMEM1Q8WWF3 244 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 TRIB2Q92519 343 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 RFT1Q96AA3 541 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 ARSGQ96EG1 525 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 EEF2KMTQ96G04 330 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 CNDP1Q96KN2 507 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 CAMK1GQ96NX5 476 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 RAB6CQ9H0N0 254 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 DPH5Q9H2P9 285 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 A4GALTQ9NPC4 353 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 C1RLQ9NZP8 487 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 B3GAT1Q9P2W7 334 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 LAMP5Q9UJQ1 280 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 EXOC6BQ9Y2D4 811 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 JRKLQ9Y4A0 524 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 SPAG9O60271 1321 aaKnown RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 KIDINS220Q9ULH0 1771 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 TEX13DA0A0J9YY54 714 aaPredicted RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 A0A0U1RRA0 63 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 SLC9B1P1A6NJY1 282 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 FLRT2O43155 660 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 TSPY4P0CV99 314 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 TSPY10P0CW01 314 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 ZNF20P17024 532 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 UGT1A1P22309 533 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 MMP13P45452 471 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 KHKP50053 298 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 ZNF75DP51815 510 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 HNRNPFP52597 415 aaKnown RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 SNU13P55769 128 aaKnown RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 B3GALT5-AS1P59052 145 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 BNC1Q01954 994 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 NHLH1Q02575 133 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 PLP2Q04941 152 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 KRT24Q2M2I5 525 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 TWISTNBQ3B726 338 aaPredicted RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 SLC9C1Q4G0N8 1177 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 Q4G0T1 1027 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 GLIPR1L2Q4G1C9 344 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 SPDYCQ5MJ68 293 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 GCNT6Q5T4J0 391 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 HECTD2Q5U5R9 776 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 C12orf60Q5U649 245 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 CASC4Q6P4E1 433 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 Q6ZTK2 550 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 TMEM26Q6ZUK4 368 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 ARMC9Q7Z3E5 817 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 CACNA2D4Q7Z3S7 1137 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 TECPR1Q7Z6L1 1165 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 TMEM139Q8IV31 216 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 HDDC3Q8N4P3 179 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 OR2T34Q8NGX1 318 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 OR4A16Q8NH70 328 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 BBS10Q8TAM1 723 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 FGFBP3Q8TAT2 258 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 SLC20A1Q8WUM9 679 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 OIT3Q8WWZ8 545 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 DPF1Q92782 380 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 VPS39Q96JC1 886 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 NECTIN4Q96NY8 510 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 TRMT61BQ9BVS5 477 aaKnown RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 GON7Q9BXV9 100 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 SNX25Q9H3E2 840 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 TRPC7Q9HCX4 862 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 PRMT8Q9NR22 394 aaPredicted RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 PAPOLBQ9NRJ5 636 aaKnown RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 SLC35D1Q9NTN3 355 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 ARPP21Q9UBL0 812 aaPredicted RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 CLIP2Q9UDT6 1046 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 ZSCAN21Q9Y5A6 473 aaPredicted RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 KLK4Q9Y5K2 254 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 SNX9Q9Y5X1 595 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 TULP4Q9NRJ4 1543 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 GRIN2AQ12879 1464 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 COL11A2P13942 1736 aaPredicted RBP1.56□□□□□ -2.16
BRCA1-202ENST00000354071 KDRP35968 1356 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 MACROD2A1Z1Q3 448 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 ASB14A6NK59 587 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 K7ESM1 405 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 ATP9AO75110 1047 aa1.56□□□□□ -2.16
BRCA1-202ENST00000354071 GMNNO75496 209 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms