RNA–Protein interactions for RNA: ENST00000352886.10

SHMT1-202, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 2 BASIC

Gene SHMT1, Length 2,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-202ENST00000352886 PPP2R2BQ00005 443 aa21.16■□□□□ 0.98
SHMT1-202ENST00000352886 NEDD8Q15843 81 aa21.16■□□□□ 0.98
SHMT1-202ENST00000352886 TMEM215Q68D42 235 aa21.16■□□□□ 0.98
SHMT1-202ENST00000352886 OR4F3Q6IEY1 312 aa21.16■□□□□ 0.98
SHMT1-202ENST00000352886 NOXRED1Q6NXP6 359 aa21.16■□□□□ 0.98
SHMT1-202ENST00000352886 SVOPLQ8N434 492 aa21.16■□□□□ 0.98
SHMT1-202ENST00000352886 KLHL23Q8NBE8 558 aa21.16■□□□□ 0.98
SHMT1-202ENST00000352886 ASZ1Q8WWH4 475 aa21.16■□□□□ 0.98
SHMT1-202ENST00000352886 SORCS1Q8WY21 1168 aa21.16■□□□□ 0.98
SHMT1-202ENST00000352886 RDH12Q96NR8 316 aa21.16■□□□□ 0.98
SHMT1-202ENST00000352886 PHF12Q96QT6 1004 aa21.16■□□□□ 0.98
SHMT1-202ENST00000352886 LTB4R2Q9NPC1 389 aa21.16■□□□□ 0.98
SHMT1-202ENST00000352886 ZNF701M0R085 212 aaPredicted RBP21.16■□□□□ 0.98
SHMT1-202ENST00000352886 JUPP14923 745 aa21.16■□□□□ 0.98
SHMT1-202ENST00000352886 ANKRD34AQ69YU3 496 aa21.16■□□□□ 0.98
SHMT1-202ENST00000352886 CYB5D2Q8WUJ1 264 aa21.16■□□□□ 0.98
SHMT1-202ENST00000352886 REXO5Q96IC2 774 aaKnown RBP21.16■□□□□ 0.98
SHMT1-202ENST00000352886 MAGIXQ9H6Y5 334 aa21.16■□□□□ 0.98
SHMT1-202ENST00000352886 SPHK2Q9NRA0 654 aa21.16■□□□□ 0.98
SHMT1-202ENST00000352886 TMEM202A6NGA9 273 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 NPIPB8E9PQR5 432 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 IRF8Q02556 426 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 VAC14Q08AM6 782 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 SLC14A1Q13336 389 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 GPR107Q5VW38 600 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 ELMSAN1Q6PJG2 1045 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 DOK6Q6PKX4 331 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 NEK10Q6ZWH5 1172 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 OTOP2Q7RTS6 562 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 ADHFE1Q8IWW8 467 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 C8orf59Q8N0T1 100 aaPredicted RBP21.15■□□□□ 0.98
SHMT1-202ENST00000352886 OR10Q1Q8NGQ4 319 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 PNPT1Q8TCS8 783 aaKnown RBP21.15■□□□□ 0.98
SHMT1-202ENST00000352886 MBOAT4Q96T53 435 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 HEPHQ9BQS7 1158 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 PCDH12Q9NPG4 1184 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 TDP1Q9NUW8 608 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 FAM118AQ9NWS6 357 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 FADS2P1A8MWK0 482 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 WNT9AO14904 365 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 FTH1P02794 183 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 TTKP33981 857 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 KIR3DL1P43629 444 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 ABHD18Q0P651 414 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 ARSIQ5FYB1 569 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 LY6G5CQ5SRR4 150 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 TTC23Q5W5X9 447 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 ARHGAP22Q7Z5H3 698 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 THAP5Q7Z6K1 395 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 EID3Q8N140 333 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 NAT16Q8N8M0 369 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 B4GALNT2Q8NHY0 566 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 CSGALNACT1Q8TDX6 532 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 GAB3Q8WWW8 586 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 FBXL8Q96CD0 374 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 RBM4BQ9BQ04 359 aaKnown RBP21.15■□□□□ 0.98
SHMT1-202ENST00000352886 RIOK2Q9BVS4 552 aaKnown RBP21.15■□□□□ 0.98
SHMT1-202ENST00000352886 RBM4Q9BWF3 364 aaKnown RBP21.15■□□□□ 0.98
SHMT1-202ENST00000352886 ERVW-1Q9UQF0 538 aa21.15■□□□□ 0.98
SHMT1-202ENST00000352886 MTCL1Q9Y4B5 1905 aaKnown RBP21.15■□□□□ 0.98
SHMT1-202ENST00000352886 TTC34A8MYJ7 566 aa21.14■□□□□ 0.97
SHMT1-202ENST00000352886 E2F6O75461 281 aa21.14■□□□□ 0.97
SHMT1-202ENST00000352886 RFPL2O75678 378 aa21.14■□□□□ 0.97
SHMT1-202ENST00000352886 RECQL5O94762 991 aaPredicted RBP21.14■□□□□ 0.97
SHMT1-202ENST00000352886 CD22P20273 847 aa21.14■□□□□ 0.97
SHMT1-202ENST00000352886 POLR2IP36954 125 aaKnown RBP21.14■□□□□ 0.97
SHMT1-202ENST00000352886 PIGAP37287 484 aa21.14■□□□□ 0.97
SHMT1-202ENST00000352886 DCDC1P59894 354 aa21.14■□□□□ 0.97
SHMT1-202ENST00000352886 ABRQ12979 859 aa21.14■□□□□ 0.97
SHMT1-202ENST00000352886 CES5AQ6NT32 575 aa21.14■□□□□ 0.97
SHMT1-202ENST00000352886 FKBP9P1Q75LS8 142 aa21.14■□□□□ 0.97
SHMT1-202ENST00000352886 TMEM179BQ7Z7N9 219 aa21.14■□□□□ 0.97
SHMT1-202ENST00000352886 ZCCHC7Q8N3Z6 543 aaKnown RBP21.14■□□□□ 0.97
SHMT1-202ENST00000352886 HHIPQ96QV1 700 aa21.14■□□□□ 0.97
SHMT1-202ENST00000352886 DCUN1D5Q9BTE7 237 aa21.14■□□□□ 0.97
SHMT1-202ENST00000352886 AMBRA1Q9C0C7 1298 aa21.14■□□□□ 0.97
SHMT1-202ENST00000352886 USE1Q9NZ43 259 aa21.14■□□□□ 0.97
SHMT1-202ENST00000352886 SLCO2B1O94956 709 aa21.14■□□□□ 0.97
SHMT1-202ENST00000352886 AP2A2O94973 939 aa21.14■□□□□ 0.97
SHMT1-202ENST00000352886 GSTM1P09488 218 aa21.14■□□□□ 0.97
SHMT1-202ENST00000352886 LINC00271P0C7V0 271 aa21.14■□□□□ 0.97
SHMT1-202ENST00000352886 MAP4P27816 1152 aaKnown RBP21.14■□□□□ 0.97
SHMT1-202ENST00000352886 HPCAP84074 193 aa21.14■□□□□ 0.97
SHMT1-202ENST00000352886 GSTM4Q03013 218 aa21.14■□□□□ 0.97
SHMT1-202ENST00000352886 EPS8Q12929 822 aa21.14■□□□□ 0.97
SHMT1-202ENST00000352886 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.14■□□□□ 0.97
SHMT1-202ENST00000352886 ZNF773Q6PK81 442 aa21.14■□□□□ 0.97
SHMT1-202ENST00000352886 ZNF551Q7Z340 670 aaPredicted RBP21.14■□□□□ 0.97
SHMT1-202ENST00000352886 SYT12Q8IV01 421 aa21.14■□□□□ 0.97
SHMT1-202ENST00000352886 PJA1Q8NG27 643 aa21.14■□□□□ 0.97
SHMT1-202ENST00000352886 PYURFQ96I23 114 aa21.14■□□□□ 0.97
SHMT1-202ENST00000352886 TCF25Q9BQ70 676 aa21.14■□□□□ 0.97
SHMT1-202ENST00000352886 REXO4Q9GZR2 422 aaKnown RBP21.14■□□□□ 0.97
SHMT1-202ENST00000352886 ADNPQ9H2P0 1102 aa21.14■□□□□ 0.97
SHMT1-202ENST00000352886 THG1LQ9NWX6 298 aaKnown RBP21.14■□□□□ 0.97
SHMT1-202ENST00000352886 U3KQV3 271 aa21.14■□□□□ 0.97
SHMT1-202ENST00000352886 SERTM1A2A2V5 107 aa21.13■□□□□ 0.97
SHMT1-202ENST00000352886 ARHGEF33A8MVX0 844 aa21.13■□□□□ 0.97
SHMT1-202ENST00000352886 UPK3BL1B0FP48 263 aa21.13■□□□□ 0.97
SHMT1-202ENST00000352886 UPK3BL2E5RIL1 263 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms