RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 HLA-FP30511 346 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 MASP1P48740 699 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 SPINT3P49223 89 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 PTSQ03393 145 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 PPP1R8Q12972 351 aaKnown RBP13.36□□□□□ -0.27
SMC6-201ENST00000351948 SLC2A7Q6PXP3 512 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 LRRC70Q7Z2Q7 622 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 TRIM43Q96BQ3 446 aaPredicted RBP13.36□□□□□ -0.27
SMC6-201ENST00000351948 CRISPLD1Q9H336 500 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 PDP1Q9P0J1 537 aaPredicted RBP13.36□□□□□ -0.27
SMC6-201ENST00000351948 PCDHGA4Q9Y5G9 962 aa13.36□□□□□ -0.27
SMC6-201ENST00000351948 G3V2T6 193 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 MANBAO00462 879 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 CCDC159P0C7I6 412 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 NFE2L1Q14494 772 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 C18orf21Q32NC0 220 aaPredicted RBP13.35□□□□□ -0.27
SMC6-201ENST00000351948 NADSYN1Q6IA69 706 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 SLC5A11Q8WWX8 675 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 OR2M4Q96R27 311 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 C17orf62Q9BQA9 187 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 TOR4AQ9NXH8 423 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 ENOPH1Q9UHY7 261 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 LATS1O95835 1130 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 NDUFS1P28331 727 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 FAM78AQ5JUQ0 283 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 ZNF678Q5SXM1 525 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 ECM29Q5VYK3 1845 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 UBR3Q6ZT12 1888 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 PRR5P85299 388 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 KBTBD6Q86V97 674 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 TRAM1L1Q8N609 369 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 ZNF540Q8NDQ6 660 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 ADCY4Q8NFM4 1077 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 CD244Q9BZW8 370 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 DNAJA2O60884 412 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 CDC123O75794 336 aaPredicted RBP13.35□□□□□ -0.27
SMC6-201ENST00000351948 OR6B1O95007 311 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 CD1DP15813 335 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 SGSHP51688 502 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 KHDC1Q4VXA5 237 aaKnown RBP13.35□□□□□ -0.27
SMC6-201ENST00000351948 TOR1AIP1Q5JTV8 583 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 TTC23Q5W5X9 447 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 USP53Q70EK8 1073 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 ADGRG6Q86SQ4 1221 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 SPPL3Q8TCT6 385 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 SCRN2Q96FV2 425 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 LRIG1Q96JA1 1093 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 HHIPQ96QV1 700 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 AP4B1Q9Y6B7 739 aa13.35□□□□□ -0.27
SMC6-201ENST00000351948 PNMA8CA0A1B0GUJ8 204 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 DYTNA2CJ06 578 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 TYROBPO43914 113 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 CBSLP0DN79 551 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 CBSP35520 551 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 AVPR1BP47901 424 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 DIO3P55073 304 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 TAS2R50P59544 299 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 TMEM214Q6NUQ4 689 aaKnown RBP13.34□□□□□ -0.27
SMC6-201ENST00000351948 ZNF852Q6ZMS4 543 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 ZNF730Q6ZMV8 503 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 RASGRP3Q8IV61 690 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 COX18Q8N8Q8 333 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 ZBED6CLQ96FA7 236 aaPredicted RBP13.34□□□□□ -0.27
SMC6-201ENST00000351948 TRIM8Q9BZR9 551 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 S100A14Q9HCY8 104 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 KLKB1P03952 638 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 SRPRAP08240 638 aaKnown RBP13.34□□□□□ -0.27
SMC6-201ENST00000351948 TSPAN19P0C672 248 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 LRTOMTQ8WZ04 291 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 WDR92Q96MX6 357 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 MGME1Q9BQP7 344 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 ZNF576Q9H609 170 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 IL26Q9NPH9 171 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 CDH12P55289 794 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 PDK3Q15120 406 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 DOK4Q8TEW6 326 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 RGMAQ96B86 450 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 SLC35G5Q96KT7 338 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 DDX28Q9NUL7 540 aaKnown RBP13.34□□□□□ -0.27
SMC6-201ENST00000351948 ALKBH4Q9NXW9 302 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 PRAMEF12O95522 483 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 SERPINA1P01009 418 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 CYP17A1P05093 508 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 FGF3P11487 239 aaPredicted RBP13.34□□□□□ -0.27
SMC6-201ENST00000351948 GSTM5P46439 218 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 PNLIPRP1P54315 467 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 TANGO2Q6ICL3 276 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 TIFABQ6ZNK6 161 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 WDR36Q8NI36 951 aaKnown RBP13.34□□□□□ -0.27
SMC6-201ENST00000351948 SEC14L1Q92503 715 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 ZNF317Q96PQ6 595 aaPredicted RBP13.34□□□□□ -0.27
SMC6-201ENST00000351948 SLC17A9Q9BYT1 436 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 CEP44Q9C0F1 390 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 C6orf62Q9GZU0 229 aaPredicted RBP13.34□□□□□ -0.27
SMC6-201ENST00000351948 LMAN1LQ9HAT1 526 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 WASF2Q9Y6W5 498 aa13.34□□□□□ -0.27
SMC6-201ENST00000351948 ZCWPW2A0A1B0GU75 182 aa13.33□□□□□ -0.27
SMC6-201ENST00000351948 FAM234BA2RU67 622 aa13.33□□□□□ -0.27
SMC6-201ENST00000351948 OAS1P00973 400 aaKnown RBP13.33□□□□□ -0.27
SMC6-201ENST00000351948 JUNDP17535 347 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms