RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 FNDC3BQ53EP0 1204 aaKnown RBP8.59□□□□□ -1.03
SNCA-201ENST00000336904 CYBRD1Q53TN4 286 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 MPP7Q5T2T1 576 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 CWF19L1Q69YN2 538 aaKnown RBP8.59□□□□□ -1.03
SNCA-201ENST00000336904 RAET1GQ6H3X3 334 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 CES5AQ6NT32 575 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 ZCCHC8Q6NZY4 707 aaKnown RBP8.59□□□□□ -1.03
SNCA-201ENST00000336904 ELMSAN1Q6PJG2 1045 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 TRMT11Q7Z4G4 463 aaKnown RBP8.59□□□□□ -1.03
SNCA-201ENST00000336904 THOC6Q86W42 341 aaKnown RBP8.59□□□□□ -1.03
SNCA-201ENST00000336904 CLVS1Q8IUQ0 354 aaPredicted RBP8.59□□□□□ -1.03
SNCA-201ENST00000336904 FAM20CQ8IXL6 584 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 OR4K1Q8NGD4 311 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 MCOLN3Q8TDD5 553 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 TMEM159Q96B96 161 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 SLC47A1Q96FL8 570 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 SPNS1Q9H2V7 528 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 CLMPQ9H6B4 373 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 ZNF696Q9H7X3 374 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 DNAJC11Q9NVH1 559 aa8.59□□□□□ -1.03
SNCA-201ENST00000336904 AGAP14A8MT82 685 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 UPK1AO00322 258 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 SLC28A1O00337 649 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 RFXANKO14593 260 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 HS6ST1O60243 411 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 GMNNO75496 209 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 TGFB1P01137 390 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 OPN1SWP03999 348 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 LAMP1P11279 417 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 ACPPP15309 386 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 PFKLP17858 780 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 NNMTP40261 264 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 DGKEP52429 567 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 CYP4F2P78329 520 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 TXNL4AP83876 142 aaKnown RBP8.59□□□□□ -1.04
SNCA-201ENST00000336904 CHRNB3Q05901 458 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 TMEM115Q12893 351 aaPredicted RBP8.59□□□□□ -1.04
SNCA-201ENST00000336904 NFE2L1Q14494 772 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 ZNF284Q2VY69 593 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 ARHGAP15Q53QZ3 475 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 FRG2Q64ET8 278 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 NOXRED1Q6NXP6 359 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 AGTRAPQ6RW13 159 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 GET4Q7L5D6 327 aaPredicted RBP8.59□□□□□ -1.04
SNCA-201ENST00000336904 C7orf61Q8IZ16 206 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 C1orf52Q8N6N3 182 aaKnown RBP8.59□□□□□ -1.04
SNCA-201ENST00000336904 OR5AK3PQ8NH89 298 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 USP7Q93009 1102 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 NEIL2Q969S2 332 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 FRG2BQ96QU4 278 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 PANX1Q96RD7 426 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 NTMT1Q9BV86 223 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 SLC12A9Q9BXP2 914 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 PAIP1Q9H074 479 aaKnown RBP8.59□□□□□ -1.04
SNCA-201ENST00000336904 RETREG1Q9H6L5 497 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 SGK2Q9HBY8 427 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 IL23AQ9NPF7 189 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 SERHLQ9NQF3 203 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 SMPD3Q9NY59 655 aaPredicted RBP8.59□□□□□ -1.04
SNCA-201ENST00000336904 GULP1Q9UBP9 304 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 ACSL6Q9UKU0 697 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 TDRKHQ9Y2W6 561 aaKnown RBP8.59□□□□□ -1.04
SNCA-201ENST00000336904 INSL6Q9Y581 213 aa8.59□□□□□ -1.04
SNCA-201ENST00000336904 CCDC88CQ9P219 2028 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 GNG14A0A1W2PPG7 69 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 ELOVL7A1L3X0 281 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 H0Y858 1186 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 PRSS23O95084 383 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 RASAL1O95294 804 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 ZBTB11O95625 1053 aaPredicted RBP8.58□□□□□ -1.04
SNCA-201ENST00000336904 CAPNS1P04632 268 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 GPIP06744 558 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 COX7A2P14406 83 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 AGXTP21549 392 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 CD9P21926 228 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 HTR1EP28566 365 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 BMPR1AP36894 532 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 HSPA13P48723 471 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 PON2Q15165 354 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 DUS1LQ6P1R4 473 aaKnown RBP8.58□□□□□ -1.04
SNCA-201ENST00000336904 LIPIQ6XZB0 460 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 LPCAT2Q7L5N7 544 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 PTRH1Q86Y79 214 aaKnown RBP8.58□□□□□ -1.04
SNCA-201ENST00000336904 CBARPQ8N350 705 aaPredicted RBP8.58□□□□□ -1.04
SNCA-201ENST00000336904 DHRSXQ8N5I4 330 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 PLA2G15Q8NCC3 412 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 TPD52L3Q96J77 140 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 LYSMD1Q96S90 227 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 PKP4Q99569 1192 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 C9orf16Q9BUW7 83 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 ANKRD60Q9BZ19 345 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 OR51B5Q9H339 312 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 TOR3AQ9H497 397 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 PNPLA3Q9NST1 481 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 MRGBPQ9NV56 204 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 SH3BP4Q9P0V3 963 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 PNMA8BQ9ULN7 279 aaPredicted RBP8.58□□□□□ -1.04
SNCA-201ENST00000336904 ABCG2Q9UNQ0 655 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 ZNF510Q9Y2H8 683 aa8.58□□□□□ -1.04
SNCA-201ENST00000336904 MTCL1Q9Y4B5 1905 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms