RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 E2F1Q01094 437 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 LCP2Q13094 533 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 C14orf28Q4W4Y0 310 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 UNC50Q53HI1 259 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 SH2D4BQ5SQS7 431 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 UNQ6494/PRO21346Q6UXR6 183 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 CYHR1Q6ZMK1 362 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 TMPRSS9Q7Z410 1059 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 MTDHQ86UE4 582 aaKnown RBP15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 CLYBLQ8N0X4 340 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 GALNT15Q8N3T1 639 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 ARL14Q8N4G2 192 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 DCBLD1Q8N8Z6 715 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 FAM136AQ96C01 138 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 ERP27Q96DN0 273 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 THOC1Q96FV9 657 aaKnown RBP15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 LINC00615Q96LM1 132 aaPredicted RBP15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 COG4Q9H9E3 785 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 PRDM8Q9NQV8 689 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 SCHIP1Q9P0W5 487 aaPredicted RBP15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 LRIT1Q9P2V4 623 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 MARCOQ9UEW3 520 aaPredicted RBP15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 RRP15Q9Y3B9 282 aaKnown RBP15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 PKD1L2Q7Z442 2459 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 CACNA1BQ00975 2339 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 PIKFYVEQ9Y2I7 2098 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 PMS2P1A4D2B8 440 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 A6NCN8 305 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 TAF4O00268 1085 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 LIN7AO14910 233 aaPredicted RBP15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 B4GAT1O43505 415 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 SGTAO43765 313 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 GPC4O75487 556 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 UBOX5O94941 541 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 RPS17P08708 135 aaKnown RBP15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 HIST1H2AGP0C0S8 130 aaPredicted RBP15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 HIST1H2ADP20671 130 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 SERPINB3P29508 390 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 CCR7P32248 378 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 RPIAP49247 311 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 HNMTP50135 292 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 IDH3AP50213 366 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 PDX1P52945 283 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 PKNOX1P55347 436 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 ACSBG2Q5FVE4 666 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 SBSNQ6UWP8 590 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 XKR5Q6UX68 686 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 CUZD1Q86UP6 607 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 UBTD2Q8WUN7 234 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 GLMNQ92990 594 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 HIST1H2AHQ96KK5 128 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 HIST1H2AJQ99878 128 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 H2AFJQ9BTM1 129 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 SLC12A9Q9BXP2 914 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 UNKQ9C0B0 810 aaKnown RBP15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 KLC4Q9NSK0 619 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 ZDHHC2Q9UIJ5 367 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 CLCA2Q9UQC9 943 aa15.97■□□□□ 0.15
PDLIM1-201ENST00000329399 NBEAQ8NFP9 2946 aa15.96■□□□□ 0.15
PDLIM1-201ENST00000329399 URB1O60287 2271 aaKnown RBP15.96■□□□□ 0.15
PDLIM1-201ENST00000329399 PRAMEF33A0A0G2JMD5 474 aa15.96■□□□□ 0.14
PDLIM1-201ENST00000329399 CFAP73A6NFT4 308 aa15.96■□□□□ 0.14
PDLIM1-201ENST00000329399 NTN3O00634 580 aaPredicted RBP15.96■□□□□ 0.14
PDLIM1-201ENST00000329399 VPS4BO75351 444 aa15.96■□□□□ 0.14
PDLIM1-201ENST00000329399 CHRNGP07510 517 aa15.96■□□□□ 0.14
PDLIM1-201ENST00000329399 CYP2A7P20853 494 aa15.96■□□□□ 0.14
PDLIM1-201ENST00000329399 MNAT1P51948 309 aa15.96■□□□□ 0.14
PDLIM1-201ENST00000329399 OR1D5P58170 312 aa15.96■□□□□ 0.14
PDLIM1-201ENST00000329399 CLCQ05315 142 aa15.96■□□□□ 0.14
PDLIM1-201ENST00000329399 PPP1R3AQ16821 1122 aa15.96■□□□□ 0.14
PDLIM1-201ENST00000329399 DET1Q7L5Y6 550 aa15.96■□□□□ 0.14
PDLIM1-201ENST00000329399 B3GNT8Q7Z7M8 397 aa15.96■□□□□ 0.14
PDLIM1-201ENST00000329399 ZNF761Q86XN6 746 aaPredicted RBP15.96■□□□□ 0.14
PDLIM1-201ENST00000329399 BEND7Q8N7W2 519 aaPredicted RBP15.96■□□□□ 0.14
PDLIM1-201ENST00000329399 ZNF483Q8TF39 744 aaPredicted RBP15.96■□□□□ 0.14
PDLIM1-201ENST00000329399 MAGEB10Q96LZ2 347 aaPredicted RBP15.96■□□□□ 0.14
PDLIM1-201ENST00000329399 ABCG4Q9H172 646 aa15.96■□□□□ 0.14
PDLIM1-201ENST00000329399 RMI1Q9H9A7 625 aa15.96■□□□□ 0.14
PDLIM1-201ENST00000329399 PARVBQ9HBI1 364 aa15.96■□□□□ 0.14
PDLIM1-201ENST00000329399 PTBP2Q9UKA9 531 aaKnown RBP15.96■□□□□ 0.14
PDLIM1-201ENST00000329399 ATXN7L1Q9ULK2 861 aaPredicted RBP15.96■□□□□ 0.14
PDLIM1-201ENST00000329399 CDYLQ9Y232 598 aa15.96■□□□□ 0.14
PDLIM1-201ENST00000329399 TRAF6Q9Y4K3 522 aa15.96■□□□□ 0.14
PDLIM1-201ENST00000329399 OR2AG2A6NM03 316 aa15.95■□□□□ 0.14
PDLIM1-201ENST00000329399 GFYI3L273 518 aa15.95■□□□□ 0.14
PDLIM1-201ENST00000329399 DNAJC8O75937 253 aaPredicted RBP15.95■□□□□ 0.14
PDLIM1-201ENST00000329399 UNC5CO95185 931 aa15.95■□□□□ 0.14
PDLIM1-201ENST00000329399 ANXA5P08758 320 aa15.95■□□□□ 0.14
PDLIM1-201ENST00000329399 CDK4P11802 303 aa15.95■□□□□ 0.14
PDLIM1-201ENST00000329399 GLB1P16278 677 aa15.95■□□□□ 0.14
PDLIM1-201ENST00000329399 EEF1DP29692 281 aaKnown RBP15.95■□□□□ 0.14
PDLIM1-201ENST00000329399 SCTRP47872 440 aa15.95■□□□□ 0.14
PDLIM1-201ENST00000329399 INHBCP55103 352 aa15.95■□□□□ 0.14
PDLIM1-201ENST00000329399 ACTN3Q08043 901 aaPredicted RBP15.95■□□□□ 0.14
PDLIM1-201ENST00000329399 SF3A3Q12874 501 aaKnown RBP eCLIP15.95■□□□□ 0.14
PDLIM1-201ENST00000329399 IYDQ6PHW0 289 aa15.95■□□□□ 0.14
PDLIM1-201ENST00000329399 TMEM220Q6QAJ8 160 aa15.95■□□□□ 0.14
PDLIM1-201ENST00000329399 FAM83HQ6ZRV2 1179 aaPredicted RBP15.95■□□□□ 0.14
PDLIM1-201ENST00000329399 LKAAEAR1Q8TD35 194 aa15.95■□□□□ 0.14
PDLIM1-201ENST00000329399 MCOLN3Q8TDD5 553 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms