RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 CALCOCO2Q13137 446 aa26.54■■□□□ 1.84
ATPAF1-201ENST00000329231 FASTKQ14296 549 aaKnown RBP26.54■■□□□ 1.84
ATPAF1-201ENST00000329231 FRG1Q14331 258 aaKnown RBP26.54■■□□□ 1.84
ATPAF1-201ENST00000329231 NAA25Q14CX7 972 aa26.54■■□□□ 1.84
ATPAF1-201ENST00000329231 PTCHD3Q3KNS1 767 aa26.54■■□□□ 1.84
ATPAF1-201ENST00000329231 CYHR1Q6ZMK1 362 aa26.54■■□□□ 1.84
ATPAF1-201ENST00000329231 ZNF572Q7Z3I7 529 aaPredicted RBP26.54■■□□□ 1.84
ATPAF1-201ENST00000329231 ZNF655Q8N720 491 aaPredicted RBP26.54■■□□□ 1.84
ATPAF1-201ENST00000329231 OR2A1Q8NGT9 310 aa26.54■■□□□ 1.84
ATPAF1-201ENST00000329231 PROKR1Q8TCW9 393 aa26.54■■□□□ 1.84
ATPAF1-201ENST00000329231 PKP4Q99569 1192 aa26.54■■□□□ 1.84
ATPAF1-201ENST00000329231 MIPEPQ99797 713 aa26.54■■□□□ 1.84
ATPAF1-201ENST00000329231 KLK4Q9Y5K2 254 aa26.54■■□□□ 1.84
ATPAF1-201ENST00000329231 A0A1W2PPV9 198 aa26.53■■□□□ 1.84
ATPAF1-201ENST00000329231 C9J4A7 227 aa26.53■■□□□ 1.84
ATPAF1-201ENST00000329231 E7ESA3 106 aa26.53■■□□□ 1.84
ATPAF1-201ENST00000329231 GFYI3L273 518 aa26.53■■□□□ 1.84
ATPAF1-201ENST00000329231 FURINP09958 794 aa26.53■■□□□ 1.84
ATPAF1-201ENST00000329231 MCM3P25205 808 aa26.53■■□□□ 1.84
ATPAF1-201ENST00000329231 RGS4P49798 205 aa26.53■■□□□ 1.84
ATPAF1-201ENST00000329231 RPS18P62269 152 aaKnown RBP26.53■■□□□ 1.84
ATPAF1-201ENST00000329231 MRPS25P82663 173 aaKnown RBP26.53■■□□□ 1.84
ATPAF1-201ENST00000329231 KCNAB2Q13303 367 aa26.53■■□□□ 1.84
ATPAF1-201ENST00000329231 UGT8Q16880 541 aa26.53■■□□□ 1.84
ATPAF1-201ENST00000329231 TRMT10BQ6PF06 316 aaKnown RBP26.53■■□□□ 1.84
ATPAF1-201ENST00000329231 ANKMY2Q8IV38 441 aa26.53■■□□□ 1.84
ATPAF1-201ENST00000329231 ENDOVQ8N8Q3 282 aaKnown RBP26.53■■□□□ 1.84
ATPAF1-201ENST00000329231 ZNF592Q92610 1267 aa26.53■■□□□ 1.84
ATPAF1-201ENST00000329231 C17orf62Q9BQA9 187 aa26.53■■□□□ 1.84
ATPAF1-201ENST00000329231 NDC1Q9BTX1 674 aa26.53■■□□□ 1.84
ATPAF1-201ENST00000329231 TXLNGQ9NUQ3 528 aa26.53■■□□□ 1.84
ATPAF1-201ENST00000329231 WHRNQ9P202 907 aa26.53■■□□□ 1.84
ATPAF1-201ENST00000329231 CORO1CQ9ULV4 474 aaPredicted RBP26.53■■□□□ 1.84
ATPAF1-201ENST00000329231 SNRNP200O75643 2136 aaKnown RBP26.53■■□□□ 1.84
ATPAF1-201ENST00000329231 COL6A6A6NMZ7 2263 aa26.53■■□□□ 1.84
ATPAF1-201ENST00000329231 PIEZO2Q9H5I5 2752 aa26.52■■□□□ 1.84
ATPAF1-201ENST00000329231 RAD51CO43502 376 aa26.52■■□□□ 1.84
ATPAF1-201ENST00000329231 KALRNO60229 2985 aa26.52■■□□□ 1.84
ATPAF1-201ENST00000329231 URI1O94763 535 aaPredicted RBP26.52■■□□□ 1.84
ATPAF1-201ENST00000329231 CTSBP07858 339 aa26.52■■□□□ 1.84
ATPAF1-201ENST00000329231 CMPK1P30085 196 aa26.52■■□□□ 1.84
ATPAF1-201ENST00000329231 RPA3P35244 121 aaPredicted RBP26.52■■□□□ 1.84
ATPAF1-201ENST00000329231 PNLIPRP1P54315 467 aa26.52■■□□□ 1.84
ATPAF1-201ENST00000329231 RBM20Q5T481 1227 aaKnown RBP26.52■■□□□ 1.84
ATPAF1-201ENST00000329231 ZNF385CQ66K41 422 aaPredicted RBP26.52■■□□□ 1.84
ATPAF1-201ENST00000329231 FAM198BQ6UWH4 519 aa26.52■■□□□ 1.84
ATPAF1-201ENST00000329231 PIWIL4Q7Z3Z4 852 aaKnown RBP26.52■■□□□ 1.84
ATPAF1-201ENST00000329231 FBXO36Q8NEA4 188 aa26.52■■□□□ 1.84
ATPAF1-201ENST00000329231 DLG3Q92796 817 aa26.52■■□□□ 1.84
ATPAF1-201ENST00000329231 SLC25A18Q9H1K4 315 aa26.52■■□□□ 1.84
ATPAF1-201ENST00000329231 STARD5Q9NSY2 213 aa26.52■■□□□ 1.84
ATPAF1-201ENST00000329231 SNX7Q9UNH6 387 aa26.52■■□□□ 1.84
ATPAF1-201ENST00000329231 KCNMB2Q9Y691 235 aa26.52■■□□□ 1.84
ATPAF1-201ENST00000329231 B8ZZF3 427 aa26.51■■□□□ 1.83
ATPAF1-201ENST00000329231 SLC16A8O95907 504 aa26.51■■□□□ 1.83
ATPAF1-201ENST00000329231 SYF2O95926 243 aaKnown RBP26.51■■□□□ 1.83
ATPAF1-201ENST00000329231 CAPN1P07384 714 aa26.51■■□□□ 1.83
ATPAF1-201ENST00000329231 TIAL1Q01085 375 aaKnown RBP eCLIP26.51■■□□□ 1.83
ATPAF1-201ENST00000329231 NFATC3Q12968 1075 aa26.51■■□□□ 1.83
ATPAF1-201ENST00000329231 CBLBQ13191 982 aa26.51■■□□□ 1.83
ATPAF1-201ENST00000329231 TCTE1Q5JU00 501 aa26.51■■□□□ 1.83
ATPAF1-201ENST00000329231 SUSD1Q6UWL2 747 aa26.51■■□□□ 1.83
ATPAF1-201ENST00000329231 UBE2R2Q712K3 238 aaPredicted RBP26.51■■□□□ 1.83
ATPAF1-201ENST00000329231 ZNF605Q86T29 641 aa26.51■■□□□ 1.83
ATPAF1-201ENST00000329231 SPNS2Q8IVW8 549 aa26.51■■□□□ 1.83
ATPAF1-201ENST00000329231 THAP4Q8WY91 577 aa26.51■■□□□ 1.83
ATPAF1-201ENST00000329231 DHRS4Q9BTZ2 278 aa26.51■■□□□ 1.83
ATPAF1-201ENST00000329231 ACAT2Q9BWD1 397 aa26.51■■□□□ 1.83
ATPAF1-201ENST00000329231 DPH5Q9H2P9 285 aa26.51■■□□□ 1.83
ATPAF1-201ENST00000329231 SLC17A6Q9P2U8 582 aa26.51■■□□□ 1.83
ATPAF1-201ENST00000329231 TCFL5Q9UL49 500 aa26.51■■□□□ 1.83
ATPAF1-201ENST00000329231 MAN2B2Q9Y2E5 1009 aa26.51■■□□□ 1.83
ATPAF1-201ENST00000329231 ARSFP54793 590 aa26.5■■□□□ 1.83
ATPAF1-201ENST00000329231 CDKN2DP55273 166 aa26.5■■□□□ 1.83
ATPAF1-201ENST00000329231 DCDP81605 110 aaKnown RBP26.5■■□□□ 1.83
ATPAF1-201ENST00000329231 TSTA3Q13630 321 aaPredicted RBP26.5■■□□□ 1.83
ATPAF1-201ENST00000329231 NCF4Q15080 339 aa26.5■■□□□ 1.83
ATPAF1-201ENST00000329231 C1orf189Q5VU69 101 aa26.5■■□□□ 1.83
ATPAF1-201ENST00000329231 PAQR3Q6TCH7 311 aa26.5■■□□□ 1.83
ATPAF1-201ENST00000329231 PALM2Q8IXS6 379 aa26.5■■□□□ 1.83
ATPAF1-201ENST00000329231 ZBED8Q8IZ13 594 aa26.5■■□□□ 1.83
ATPAF1-201ENST00000329231 ZNF480Q8WV37 535 aa26.5■■□□□ 1.83
ATPAF1-201ENST00000329231 EEF1AKMT1Q8WVE0 214 aa26.5■■□□□ 1.83
ATPAF1-201ENST00000329231 GBP5Q96PP8 586 aa26.5■■□□□ 1.83
ATPAF1-201ENST00000329231 SELENOSQ9BQE4 189 aa26.5■■□□□ 1.83
ATPAF1-201ENST00000329231 MRPS30Q9NP92 439 aaKnown RBP26.5■■□□□ 1.83
ATPAF1-201ENST00000329231 ZFATQ9P243 1243 aa26.5■■□□□ 1.83
ATPAF1-201ENST00000329231 DHCR7Q9UBM7 475 aaKnown RBP26.5■■□□□ 1.83
ATPAF1-201ENST00000329231 PADI2Q9Y2J8 665 aa26.5■■□□□ 1.83
ATPAF1-201ENST00000329231 UTP11Q9Y3A2 253 aaKnown RBP26.5■■□□□ 1.83
ATPAF1-201ENST00000329231 SEC16AO15027 2179 aa26.5■■□□□ 1.83
ATPAF1-201ENST00000329231 SRPX2O60687 465 aaPredicted RBP26.49■■□□□ 1.83
ATPAF1-201ENST00000329231 CCNDBP1O95273 360 aa26.49■■□□□ 1.83
ATPAF1-201ENST00000329231 MGAT5Q09328 741 aa26.49■■□□□ 1.83
ATPAF1-201ENST00000329231 IL10RAQ13651 578 aa26.49■■□□□ 1.83
ATPAF1-201ENST00000329231 FASTKD3Q14CZ7 662 aaKnown RBP26.49■■□□□ 1.83
ATPAF1-201ENST00000329231 WHAMMP3Q1A5X7 153 aa26.49■■□□□ 1.83
ATPAF1-201ENST00000329231 MYO1HQ8N1T3 1032 aa26.49■■□□□ 1.83
ATPAF1-201ENST00000329231 GPATCH11Q8N954 259 aa26.49■■□□□ 1.83
ATPAF1-201ENST00000329231 MCOLN3Q8TDD5 553 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms