RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 ZUFSPQ96AP4 578 aa18.71■□□□□ 0.59
LIME1-201ENST00000309546 PTERQ96BW5 349 aa18.71■□□□□ 0.59
LIME1-201ENST00000309546 ACAT2Q9BWD1 397 aa18.71■□□□□ 0.59
LIME1-201ENST00000309546 FBXO6Q9NRD1 293 aaPredicted RBP18.71■□□□□ 0.59
LIME1-201ENST00000309546 SLC22A11Q9NSA0 550 aa18.71■□□□□ 0.59
LIME1-201ENST00000309546 INTS10Q9NVR2 710 aaKnown RBP18.71■□□□□ 0.59
LIME1-201ENST00000309546 P4HTMQ9NXG6 502 aa18.71■□□□□ 0.59
LIME1-201ENST00000309546 MAD1L1Q9Y6D9 718 aa18.71■□□□□ 0.59
LIME1-201ENST00000309546 DOPEY2Q9Y3R5 2298 aa18.71■□□□□ 0.59
LIME1-201ENST00000309546 A0A1W2PPV9 198 aa18.7■□□□□ 0.58
LIME1-201ENST00000309546 TARM1B6A8C7 271 aa18.7■□□□□ 0.58
LIME1-201ENST00000309546 MASP2O00187 686 aa18.7■□□□□ 0.58
LIME1-201ENST00000309546 MATN4O95460 622 aa18.7■□□□□ 0.58
LIME1-201ENST00000309546 UMODP07911 640 aa18.7■□□□□ 0.58
LIME1-201ENST00000309546 ITGAXP20702 1163 aa18.7■□□□□ 0.58
LIME1-201ENST00000309546 GCGRP47871 477 aa18.7■□□□□ 0.58
LIME1-201ENST00000309546 CTBP1Q13363 440 aa18.7■□□□□ 0.58
LIME1-201ENST00000309546 UBAP2LQ14157 1087 aaKnown RBP18.7■□□□□ 0.58
LIME1-201ENST00000309546 CYP1B1Q16678 543 aa18.7■□□□□ 0.58
LIME1-201ENST00000309546 DCAF10Q5QP82 559 aa18.7■□□□□ 0.58
LIME1-201ENST00000309546 ARMC3Q5W041 872 aa18.7■□□□□ 0.58
LIME1-201ENST00000309546 PPP1R32Q7Z5V6 425 aa18.7■□□□□ 0.58
LIME1-201ENST00000309546 DENND6AQ8IWF6 608 aa18.7■□□□□ 0.58
LIME1-201ENST00000309546 MCUQ8NE86 351 aa18.7■□□□□ 0.58
LIME1-201ENST00000309546 OR9A1PQ8NGU1 263 aa18.7■□□□□ 0.58
LIME1-201ENST00000309546 HMGCLL1Q8TB92 370 aa18.7■□□□□ 0.58
LIME1-201ENST00000309546 COG1Q8WTW3 980 aa18.7■□□□□ 0.58
LIME1-201ENST00000309546 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.7■□□□□ 0.58
LIME1-201ENST00000309546 CCDC68Q9H2F9 335 aa18.7■□□□□ 0.58
LIME1-201ENST00000309546 GOLGA6L10A0A0M3HER8 536 aa18.69■□□□□ 0.58
LIME1-201ENST00000309546 MAGEB16A2A368 324 aa18.69■□□□□ 0.58
LIME1-201ENST00000309546 KIF5CO60282 957 aa18.69■□□□□ 0.58
LIME1-201ENST00000309546 PHF2O75151 1096 aa18.69■□□□□ 0.58
LIME1-201ENST00000309546 VPS4BO75351 444 aa18.69■□□□□ 0.58
LIME1-201ENST00000309546 SORBS2O94875 1100 aaKnown RBP18.69■□□□□ 0.58
LIME1-201ENST00000309546 CATP04040 527 aaKnown RBP18.69■□□□□ 0.58
LIME1-201ENST00000309546 EIF2S1P05198 315 aaKnown RBP18.69■□□□□ 0.58
LIME1-201ENST00000309546 PIM1P11309 404 aaPredicted RBP18.69■□□□□ 0.58
LIME1-201ENST00000309546 CMPK1P30085 196 aa18.69■□□□□ 0.58
LIME1-201ENST00000309546 SLC1A2P43004 574 aa18.69■□□□□ 0.58
LIME1-201ENST00000309546 CD97P48960 835 aa18.69■□□□□ 0.58
LIME1-201ENST00000309546 YBX1P67809 324 aaKnown RBP18.69■□□□□ 0.58
LIME1-201ENST00000309546 CUL1Q13616 776 aa18.69■□□□□ 0.58
LIME1-201ENST00000309546 WASHC2DQ5SRD0 308 aa18.69■□□□□ 0.58
LIME1-201ENST00000309546 YOD1Q5VVQ6 348 aaPredicted RBP18.69■□□□□ 0.58
LIME1-201ENST00000309546 FRMPD2BQ6IN97 320 aa18.69■□□□□ 0.58
LIME1-201ENST00000309546 JMJD6Q6NYC1 403 aaPredicted RBP18.69■□□□□ 0.58
LIME1-201ENST00000309546 SUSD1Q6UWL2 747 aa18.69■□□□□ 0.58
LIME1-201ENST00000309546 SPNS2Q8IVW8 549 aa18.69■□□□□ 0.58
LIME1-201ENST00000309546 OR2A1Q8NGT9 310 aa18.69■□□□□ 0.58
LIME1-201ENST00000309546 FKBP10Q96AY3 582 aa18.69■□□□□ 0.58
LIME1-201ENST00000309546 OSBPL9Q96SU4 736 aa18.69■□□□□ 0.58
LIME1-201ENST00000309546 SMAD5Q99717 465 aaKnown RBP18.69■□□□□ 0.58
LIME1-201ENST00000309546 SLC30A3Q99726 388 aa18.69■□□□□ 0.58
LIME1-201ENST00000309546 SLAMF7Q9NQ25 335 aa18.69■□□□□ 0.58
LIME1-201ENST00000309546 FAM114A2Q9NRY5 505 aa18.69■□□□□ 0.58
LIME1-201ENST00000309546 C20orf96Q9NUD7 363 aaPredicted RBP18.69■□□□□ 0.58
LIME1-201ENST00000309546 MAP10Q9P2G4 905 aa18.69■□□□□ 0.58
LIME1-201ENST00000309546 CDC23Q9UJX2 597 aa18.69■□□□□ 0.58
LIME1-201ENST00000309546 VPS4AQ9UN37 437 aa18.69■□□□□ 0.58
LIME1-201ENST00000309546 MAU2Q9Y6X3 613 aa18.69■□□□□ 0.58
LIME1-201ENST00000309546 ZCWPW2A0A1B0GU75 182 aa18.68■□□□□ 0.58
LIME1-201ENST00000309546 PSIP1O75475 530 aaKnown RBP18.68■□□□□ 0.58
LIME1-201ENST00000309546 IGHEP01854 428 aa18.68■□□□□ 0.58
LIME1-201ENST00000309546 RPA3P35244 121 aaPredicted RBP18.68■□□□□ 0.58
LIME1-201ENST00000309546 OR1D4P47884 311 aa18.68■□□□□ 0.58
LIME1-201ENST00000309546 UQCRFS1P47985 274 aa18.68■□□□□ 0.58
LIME1-201ENST00000309546 CLCN7P51798 805 aa18.68■□□□□ 0.58
LIME1-201ENST00000309546 LONRF1Q17RB8 773 aa18.68■□□□□ 0.58
LIME1-201ENST00000309546 TTLL9Q3SXZ7 439 aa18.68■□□□□ 0.58
LIME1-201ENST00000309546 VWA5B1Q5TIE3 1220 aa18.68■□□□□ 0.58
LIME1-201ENST00000309546 SLC6A19Q695T7 634 aa18.68■□□□□ 0.58
LIME1-201ENST00000309546 SHISA6Q6ZSJ9 500 aa18.68■□□□□ 0.58
LIME1-201ENST00000309546 GALNT16Q8N428 558 aa18.68■□□□□ 0.58
LIME1-201ENST00000309546 DTWD1Q8N5C7 304 aa18.68■□□□□ 0.58
LIME1-201ENST00000309546 RBMXL3Q8N7X1 1067 aaKnown RBP18.68■□□□□ 0.58
LIME1-201ENST00000309546 GRK7Q8WTQ7 553 aa18.68■□□□□ 0.58
LIME1-201ENST00000309546 SMPDL3AQ92484 453 aa18.68■□□□□ 0.58
LIME1-201ENST00000309546 ZNF285Q96NJ3 590 aa18.68■□□□□ 0.58
LIME1-201ENST00000309546 DPH7Q9BTV6 452 aa18.68■□□□□ 0.58
LIME1-201ENST00000309546 SOX17Q9H6I2 414 aaPredicted RBP18.68■□□□□ 0.58
LIME1-201ENST00000309546 SLC6A20Q9NP91 592 aa18.68■□□□□ 0.58
LIME1-201ENST00000309546 ABCF3Q9NUQ8 709 aa18.68■□□□□ 0.58
LIME1-201ENST00000309546 CTSFQ9UBX1 484 aa18.68■□□□□ 0.58
LIME1-201ENST00000309546 ZC3H7BQ9UGR2 993 aaKnown RBP18.68■□□□□ 0.58
LIME1-201ENST00000309546 NEU2Q9Y3R4 380 aa18.68■□□□□ 0.58
LIME1-201ENST00000309546 LOC105369274A0A096LPK9 316 aa18.67■□□□□ 0.58
LIME1-201ENST00000309546 LOC102723532A0A0G2JNH3 316 aa18.67■□□□□ 0.58
LIME1-201ENST00000309546 SRPX2O60687 465 aaPredicted RBP18.67■□□□□ 0.58
LIME1-201ENST00000309546 ALOX12BO75342 701 aa18.67■□□□□ 0.58
LIME1-201ENST00000309546 SYF2O95926 243 aaKnown RBP18.67■□□□□ 0.58
LIME1-201ENST00000309546 ERVK-10P10266 1014 aa18.67■□□□□ 0.58
LIME1-201ENST00000309546 FNTAP49354 379 aa18.67■□□□□ 0.58
LIME1-201ENST00000309546 MPP1Q00013 466 aa18.67■□□□□ 0.58
LIME1-201ENST00000309546 NAA25Q14CX7 972 aa18.67■□□□□ 0.58
LIME1-201ENST00000309546 PPP1R7Q15435 360 aa18.67■□□□□ 0.58
LIME1-201ENST00000309546 NKG7Q16617 165 aa18.67■□□□□ 0.58
LIME1-201ENST00000309546 FAM214AQ32MH5 1076 aa18.67■□□□□ 0.58
LIME1-201ENST00000309546 PRR30Q53SZ7 412 aaPredicted RBP18.67■□□□□ 0.58
LIME1-201ENST00000309546 COX15Q7KZN9 410 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms