RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 PTCHD3Q3KNS1 767 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 UBXN11Q5T124 520 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 CARM1Q86X55 608 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 ZNF280BQ86YH2 543 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 HS3ST5Q8IZT8 346 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 MINDY2Q8NBR6 621 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 BTN2A2Q8WVV5 523 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 SLC38A2Q96QD8 506 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 ZNF607Q96SK3 696 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 MARCH7Q9H992 704 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 SEMA3GQ9NS98 782 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 WDR70Q9NW82 654 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 VPS29Q9UBQ0 182 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 ENTPD4Q9Y227 616 aa12.97□□□□□ -0.33
DDX54-201ENST00000306014 DLEC1Q9Y238 1755 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 PLOD3O60568 738 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 EOMESO95936 686 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 FGF4P08620 206 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 SMIM18P0DKX4 95 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 NTSP30990 170 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 DPP6P42658 865 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 BLVRAP53004 296 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 PRMT2P55345 433 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 C18orf21Q32NC0 220 aaPredicted RBP12.96□□□□□ -0.33
DDX54-201ENST00000306014 COQ5Q5HYK3 327 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 SCAIQ8N9R8 606 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 PLD4Q96BZ4 506 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 PSKH2Q96QS6 385 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 MIR1-1HGQ9H1L0 117 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 PCTPQ9UKL6 214 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 USP3Q9Y6I4 520 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 NEDD8-MDP1E9PL57 170 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 UGT2B17O75795 530 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 CDKN1CP49918 316 aaPredicted RBP12.96□□□□□ -0.33
DDX54-201ENST00000306014 HSF5Q4G112 596 aaPredicted RBP12.96□□□□□ -0.33
DDX54-201ENST00000306014 KIAA1614Q5VZ46 1190 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 KDELC1Q6UW63 502 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 CDK20Q8IZL9 346 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 DPP10Q8N608 796 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 PEX13Q92968 403 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 ZNF558Q96NG5 402 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 HERC2P3Q9BVR0 1158 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 CD244Q9BZW8 370 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 NAA50Q9GZZ1 169 aaKnown RBP12.96□□□□□ -0.33
DDX54-201ENST00000306014 GULP1Q9UBP9 304 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 SRRDQ9UH36 339 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 WDR37Q9Y2I8 494 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 DHRS7Q9Y394 339 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 PCDHGA11Q9Y5H2 935 aa12.96□□□□□ -0.33
DDX54-201ENST00000306014 FAM240BA0A1B0GVZ2 78 aa12.96□□□□□ -0.34
DDX54-201ENST00000306014 FUOMA2VDF0 154 aa12.96□□□□□ -0.34
DDX54-201ENST00000306014 TPST2O60704 377 aa12.96□□□□□ -0.34
DDX54-201ENST00000306014 EBLN1P0CF75 366 aa12.96□□□□□ -0.34
DDX54-201ENST00000306014 ANXA8P13928 327 aa12.96□□□□□ -0.34
DDX54-201ENST00000306014 ARCN1P48444 511 aaKnown RBP12.96□□□□□ -0.34
DDX54-201ENST00000306014 ERVPABLB-1P60509 514 aa12.96□□□□□ -0.34
DDX54-201ENST00000306014 CD47Q08722 323 aa12.96□□□□□ -0.34
DDX54-201ENST00000306014 ANKRD26P1Q6NSI1 321 aa12.96□□□□□ -0.34
DDX54-201ENST00000306014 MED27Q6P2C8 311 aa12.96□□□□□ -0.34
DDX54-201ENST00000306014 CNTN4Q8IWV2 1026 aa12.96□□□□□ -0.34
DDX54-201ENST00000306014 DBF4BQ8NFT6 615 aa12.96□□□□□ -0.34
DDX54-201ENST00000306014 MYOCQ99972 504 aa12.96□□□□□ -0.34
DDX54-201ENST00000306014 SGIP1Q9BQI5 828 aa12.96□□□□□ -0.34
DDX54-201ENST00000306014 TPT1P8Q9HAU6 139 aa12.96□□□□□ -0.34
DDX54-201ENST00000306014 OLAHQ9NV23 265 aa12.96□□□□□ -0.34
DDX54-201ENST00000306014 ACTL7AQ9Y615 435 aa12.96□□□□□ -0.34
DDX54-201ENST00000306014 INHAP05111 366 aa12.95□□□□□ -0.34
DDX54-201ENST00000306014 PORP16435 677 aaPredicted RBP12.95□□□□□ -0.34
DDX54-201ENST00000306014 FUT4P22083 530 aa12.95□□□□□ -0.34
DDX54-201ENST00000306014 SNAPC1Q16533 368 aa12.95□□□□□ -0.34
DDX54-201ENST00000306014 GPR33Q49SQ1 333 aa12.95□□□□□ -0.34
DDX54-201ENST00000306014 DCST1Q5T197 706 aa12.95□□□□□ -0.34
DDX54-201ENST00000306014 CCDC149Q6ZUS6 474 aa12.95□□□□□ -0.34
DDX54-201ENST00000306014 PIWIL3Q7Z3Z3 882 aaKnown RBP12.95□□□□□ -0.34
DDX54-201ENST00000306014 SCML4Q8N228 414 aa12.95□□□□□ -0.34
DDX54-201ENST00000306014 C10orf53Q8N6V4 93 aa12.95□□□□□ -0.34
DDX54-201ENST00000306014 C3orf58Q8NDZ4 430 aa12.95□□□□□ -0.34
DDX54-201ENST00000306014 FRS2Q8WU20 508 aa12.95□□□□□ -0.34
DDX54-201ENST00000306014 AP3S1Q92572 193 aa12.95□□□□□ -0.34
DDX54-201ENST00000306014 CITED4Q96RK1 184 aa12.95□□□□□ -0.34
DDX54-201ENST00000306014 C1QTNF1Q9BXJ1 281 aa12.95□□□□□ -0.34
DDX54-201ENST00000306014 OCEL1Q9H607 264 aa12.95□□□□□ -0.34
DDX54-201ENST00000306014 SLAMF8Q9P0V8 285 aa12.95□□□□□ -0.34
DDX54-201ENST00000306014 SLC1A7O00341 560 aa12.95□□□□□ -0.34
DDX54-201ENST00000306014 SOCS7O14512 581 aa12.95□□□□□ -0.34
DDX54-201ENST00000306014 KDELR3O43731 214 aa12.95□□□□□ -0.34
DDX54-201ENST00000306014 ATG13O75143 517 aa12.95□□□□□ -0.34
DDX54-201ENST00000306014 MT-ND2P03891 347 aa12.95□□□□□ -0.34
DDX54-201ENST00000306014 SLC10A3P09131 477 aa12.95□□□□□ -0.34
DDX54-201ENST00000306014 PLA2G16P53816 162 aa12.95□□□□□ -0.34
DDX54-201ENST00000306014 RPS3AP61247 264 aaKnown RBP12.95□□□□□ -0.34
DDX54-201ENST00000306014 SCN1BQ07699 218 aa12.95□□□□□ -0.34
DDX54-201ENST00000306014 RBM12BQ8IXT5 1001 aaKnown RBP12.95□□□□□ -0.34
DDX54-201ENST00000306014 C1orf52Q8N6N3 182 aaKnown RBP12.95□□□□□ -0.34
DDX54-201ENST00000306014 MFSD2AQ8NA29 543 aa12.95□□□□□ -0.34
DDX54-201ENST00000306014 ABHD11Q8NFV4 315 aa12.95□□□□□ -0.34
DDX54-201ENST00000306014 OR13J1Q8NGT2 312 aa12.95□□□□□ -0.34
DDX54-201ENST00000306014 TEX47Q8TBZ9 253 aa12.95□□□□□ -0.34
DDX54-201ENST00000306014 MCMBPQ9BTE3 642 aa12.95□□□□□ -0.34
DDX54-201ENST00000306014 PMF1-BGLAPU3KQ54 211 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms