RNA–Protein interactions for RNA: ENST00000303434.8

TRABD-201, Transcript of TraB domain containing, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRABD, Length 2,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-201ENST00000303434 SMARCB1Q12824 385 aa18.21■□□□□ 0.51
TRABD-201ENST00000303434 TNK1Q13470 666 aa18.21■□□□□ 0.51
TRABD-201ENST00000303434 ZNF235Q14590 738 aa18.21■□□□□ 0.51
TRABD-201ENST00000303434 FAM171A1Q5VUB5 890 aa18.21■□□□□ 0.51
TRABD-201ENST00000303434 SHEQ5VZ18 495 aa18.21■□□□□ 0.51
TRABD-201ENST00000303434 NADSYN1Q6IA69 706 aa18.21■□□□□ 0.51
TRABD-201ENST00000303434 GLYATQ6IB77 296 aa18.21■□□□□ 0.51
TRABD-201ENST00000303434 METTL2BQ6P1Q9 378 aaKnown RBP18.21■□□□□ 0.51
TRABD-201ENST00000303434 PCSK9Q8NBP7 692 aaKnown RBP18.21■□□□□ 0.51
TRABD-201ENST00000303434 EXT2Q93063 718 aa18.21■□□□□ 0.51
TRABD-201ENST00000303434 B3GALT6Q96L58 329 aa18.21■□□□□ 0.51
TRABD-201ENST00000303434 OR2A14Q96R47 310 aa18.21■□□□□ 0.51
TRABD-201ENST00000303434 RBM4BQ9BQ04 359 aaKnown RBP18.21■□□□□ 0.51
TRABD-201ENST00000303434 RBM4Q9BWF3 364 aaKnown RBP18.21■□□□□ 0.51
TRABD-201ENST00000303434 FBRSL1Q9HCM7 1045 aaKnown RBP18.21■□□□□ 0.51
TRABD-201ENST00000303434 V9GYQ6 96 aa18.21■□□□□ 0.51
TRABD-201ENST00000303434 RPP40O75818 363 aaKnown RBP18.2■□□□□ 0.5
TRABD-201ENST00000303434 RAP2AP10114 183 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 CYP2A6P11509 494 aaPredicted RBP18.2■□□□□ 0.5
TRABD-201ENST00000303434 CHRM3P20309 590 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 CST5P28325 142 aaPredicted RBP18.2■□□□□ 0.5
TRABD-201ENST00000303434 HNF4AP41235 474 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 GNPDA1P46926 289 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 PRKCZQ05513 592 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 MBTPS1Q14703 1052 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 EFL1Q7Z2Z2 1120 aaKnown RBP18.2■□□□□ 0.5
TRABD-201ENST00000303434 TCTE3Q8IZS6 198 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 OR4M1Q8NGD0 313 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 C19orf60Q96EN9 201 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 NEDD4LQ96PU5 975 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 ACOT13Q9NPJ3 140 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 TMPRSS11EQ9UL52 423 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 USP22Q9UPT9 525 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 SLC10A3P09131 477 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 ALDOCP09972 364 aaKnown RBP18.2■□□□□ 0.5
TRABD-201ENST00000303434 HTR1EP28566 365 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 WEE1P30291 646 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 MTHFRP42898 656 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 MAPKAPK2P49137 400 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 SLAMF1Q13291 335 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 EFR3AQ14156 821 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 MRPL58Q14197 206 aaKnown RBP18.2■□□□□ 0.5
TRABD-201ENST00000303434 PTGR2Q8N8N7 351 aaPredicted RBP18.2■□□□□ 0.5
TRABD-201ENST00000303434 OR4L1Q8NH43 312 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 SLC38A4Q969I6 547 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 NCLNQ969V3 563 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 GIMAP5Q96F15 307 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 SDHCQ99643 169 aaPredicted RBP18.2■□□□□ 0.5
TRABD-201ENST00000303434 UGT2B28Q9BY64 529 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 SCN3BQ9NY72 215 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 C3orf18Q9UK00 162 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 TRAPPC4Q9Y296 219 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 KCNE2Q9Y6J6 123 aa18.2■□□□□ 0.5
TRABD-201ENST00000303434 PPP6CO00743 305 aa18.19■□□□□ 0.5
TRABD-201ENST00000303434 SLC16A6O15403 523 aa18.19■□□□□ 0.5
TRABD-201ENST00000303434 AIREO43918 545 aa18.19■□□□□ 0.5
TRABD-201ENST00000303434 SIX3O95343 332 aaPredicted RBP18.19■□□□□ 0.5
TRABD-201ENST00000303434 HOXB8P17481 243 aaPredicted RBP18.19■□□□□ 0.5
TRABD-201ENST00000303434 HRH2P25021 359 aa18.19■□□□□ 0.5
TRABD-201ENST00000303434 MLLT3P42568 568 aaPredicted RBP18.19■□□□□ 0.5
TRABD-201ENST00000303434 SUOXP51687 545 aa18.19■□□□□ 0.5
TRABD-201ENST00000303434 RING1Q06587 406 aa18.19■□□□□ 0.5
TRABD-201ENST00000303434 MFSD13AQ14CX5 517 aa18.19■□□□□ 0.5
TRABD-201ENST00000303434 OR4D1Q15615 310 aa18.19■□□□□ 0.5
TRABD-201ENST00000303434 MIER2Q8N344 545 aa18.19■□□□□ 0.5
TRABD-201ENST00000303434 SVOPLQ8N434 492 aa18.19■□□□□ 0.5
TRABD-201ENST00000303434 GLB1L3Q8NCI6 653 aaPredicted RBP18.19■□□□□ 0.5
TRABD-201ENST00000303434 CNIH3Q8TBE1 160 aa18.19■□□□□ 0.5
TRABD-201ENST00000303434 NSMCE2Q96MF7 247 aa18.19■□□□□ 0.5
TRABD-201ENST00000303434 CRISPLD1Q9H336 500 aa18.19■□□□□ 0.5
TRABD-201ENST00000303434 CCSER2Q9H7U1 834 aa18.19■□□□□ 0.5
TRABD-201ENST00000303434 AKTIPQ9H8T0 292 aa18.19■□□□□ 0.5
TRABD-201ENST00000303434 GPBP1L1Q9HC44 474 aaPredicted RBP18.19■□□□□ 0.5
TRABD-201ENST00000303434 CATSPERZQ9NTU4 200 aa18.19■□□□□ 0.5
TRABD-201ENST00000303434 STOML2Q9UJZ1 356 aa18.19■□□□□ 0.5
TRABD-201ENST00000303434 DNAJC15Q9Y5T4 150 aa18.19■□□□□ 0.5
TRABD-201ENST00000303434 LYVE1Q9Y5Y7 322 aa18.19■□□□□ 0.5
TRABD-201ENST00000303434 OR6C70A6NIJ9 312 aa18.18■□□□□ 0.5
TRABD-201ENST00000303434 DSCR3O14972 297 aa18.18■□□□□ 0.5
TRABD-201ENST00000303434 CDK14O94921 469 aa18.18■□□□□ 0.5
TRABD-201ENST00000303434 PGLSO95336 258 aa18.18■□□□□ 0.5
TRABD-201ENST00000303434 ACADMP11310 421 aa18.18■□□□□ 0.5
TRABD-201ENST00000303434 ZNF37AP17032 561 aaPredicted RBP18.18■□□□□ 0.5
TRABD-201ENST00000303434 TACR2P21452 398 aa18.18■□□□□ 0.5
TRABD-201ENST00000303434 CXCR4P61073 352 aa18.18■□□□□ 0.5
TRABD-201ENST00000303434 AAK1Q2M2I8 961 aa18.18■□□□□ 0.5
TRABD-201ENST00000303434 RABL3Q5HYI8 236 aa18.18■□□□□ 0.5
TRABD-201ENST00000303434 SULT1C3Q6IMI6 304 aa18.18■□□□□ 0.5
TRABD-201ENST00000303434 CFAP52Q8N1V2 620 aa18.18■□□□□ 0.5
TRABD-201ENST00000303434 GPR62Q9BZJ7 368 aa18.18■□□□□ 0.5
TRABD-201ENST00000303434 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.18■□□□□ 0.56e-8■■■■■ 39.4
TRABD-201ENST00000303434 NIPAL2Q9H841 368 aa18.18■□□□□ 0.5
TRABD-201ENST00000303434 SCPEP1Q9HB40 452 aa18.18■□□□□ 0.5
TRABD-201ENST00000303434 PDFQ9HBH1 243 aa18.18■□□□□ 0.5
TRABD-201ENST00000303434 PRDM8Q9NQV8 689 aa18.18■□□□□ 0.5
TRABD-201ENST00000303434 NUFIP1Q9UHK0 495 aaKnown RBP18.18■□□□□ 0.5
TRABD-201ENST00000303434 OAS3Q9Y6K5 1087 aaKnown RBP18.18■□□□□ 0.5
TRABD-201ENST00000303434 A0A0D9SEW6 157 aa18.18■□□□□ 0.5
TRABD-201ENST00000303434 LINC00862A6NCI5 91 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms