RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 COPG2Q9UBF2 871 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 DCCP43146 1447 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 E7EQ34 232 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 MID1O15344 667 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 HDAC3O15379 428 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 CYB5AP00167 134 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 IDO1P14902 403 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 SPANXN2Q5MJ10 180 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 NCBP2-AS2Q69YL0 99 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 TMEM25Q86YD3 366 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 LRTOMTQ8WZ04 291 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 LPGAT1Q92604 370 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 EFHD2Q96C19 240 aaPredicted RBP7.62□□□□□ -1.19
SCN9A-201ENST00000303354 OMA1Q96E52 524 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 FZD8Q9H461 694 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 FLRT1Q9NZU1 646 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 MRPL3P09001 348 aaKnown RBP7.62□□□□□ -1.19
SCN9A-201ENST00000303354 DRD4P21917 467 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 OR2B6P58173 313 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 PRR5P85299 388 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 SGCAQ16586 387 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 RAET1LQ5VY80 246 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 CLEC17AQ6ZS10 378 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 ZNF784Q8NCA9 323 aaPredicted RBP7.62□□□□□ -1.19
SCN9A-201ENST00000303354 WFIKKN2Q8TEU8 576 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 ZNF384Q8TF68 577 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 HSPBAP1Q96EW2 488 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 PTCHD1Q96NR3 888 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 C1QTNF1Q9BXJ1 281 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 AMBNQ9NP70 447 aa7.62□□□□□ -1.19
SCN9A-201ENST00000303354 STX11O75558 287 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 IL12RB1P42701 662 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 BCAP31P51572 246 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 AP1S1P61966 158 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 PPP3R1P63098 170 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 TMEM115Q12893 351 aaPredicted RBP7.61□□□□□ -1.19
SCN9A-201ENST00000303354 HYAL4Q2M3T9 481 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 GALNT18Q6P9A2 607 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 SPATA19Q7Z5L4 167 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 TMEM203Q969S6 136 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 MACROD1Q9BQ69 325 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 TOR3AQ9H497 397 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 LRRC19Q9H756 370 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 GALPQ9UBC7 116 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 APOBEC3BQ9UH17 382 aaKnown RBP7.61□□□□□ -1.19
SCN9A-201ENST00000303354 RIIAD1A6NNX1 92 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 VILLO15195 856 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 SLC10A3P09131 477 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 GRPRP30550 384 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 YBEYP58557 167 aaPredicted RBP7.61□□□□□ -1.19
SCN9A-201ENST00000303354 SLC9B1Q4ZJI4 515 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 GPRIN1Q7Z2K8 1008 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 RASGEF1AQ8N9B8 481 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 PEX11GQ96HA9 241 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 GINS4Q9BRT9 223 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 ZCCHC3Q9NUD5 404 aaKnown RBP7.61□□□□□ -1.19
SCN9A-201ENST00000303354 ZDHHC3Q9NYG2 299 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 RNF11Q9Y3C5 154 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 NCANO14594 1321 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 FAM221BA6H8Z2 402 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 WASH3PC4AMC7 463 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 ITM2AO43736 263 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 IGFBP5P24593 272 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 STARP49675 285 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 RPP38P78345 283 aaKnown RBP7.61□□□□□ -1.19
SCN9A-201ENST00000303354 FAM174BQ3ZCQ3 159 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 IDNKQ5T6J7 187 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 CEP97Q8IW35 865 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 SLC13A3Q8WWT9 602 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 TEFMQ96QE5 360 aaKnown RBP7.61□□□□□ -1.19
SCN9A-201ENST00000303354 HERC2P3Q9BVR0 1158 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 MKKSQ9NPJ1 570 aaPredicted RBP7.61□□□□□ -1.19
SCN9A-201ENST00000303354 SDHAF3Q9NRP4 125 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 NUDT4Q9NZJ9 180 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 B4GALT6Q9UBX8 382 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 ELOVL7A1L3X0 281 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 SH3PXD2BA1X283 911 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 NPIPA5E9PKD4 350 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 PGRMC2O15173 223 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 BPGMP07738 259 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 TAS2R39P59534 338 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 LIPEQ05469 1076 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 MEA1Q16626 185 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 HEBP1Q9NRV9 189 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 CKLFQ9UBR5 152 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 NPIPA1Q9UND3 350 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 ZNF878C9JN71 531 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 ZNF20P17024 532 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 ACSL1P33121 698 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 SLC3A1Q07837 685 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 SCARB2Q14108 478 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 STK11Q15831 433 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 TCEANCQ8N8B7 351 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 Q96MT0 163 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 TMEM185BQ9H7F4 350 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 WRBO00258 174 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 RENP00797 406 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 ASLP04424 464 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 FMO3P31513 532 aa7.61□□□□□ -1.19
SCN9A-201ENST00000303354 OR12D2P58182 307 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms