RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 PROS1P07225 676 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 MYL2P10916 166 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 GFAPP14136 432 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 TSPAN8P19075 237 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 ALDH4A1P30038 563 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 PRDX3P30048 256 aaKnown RBP9.15□□□□□ -0.94
RFX3-201ENST00000302303 HSD17B2P37059 387 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 ATP1A2P50993 1020 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 CDH13P55290 713 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 LIPMQ5VYY2 423 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 ZCCHC23Q6ZST2 131 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 GLRX5Q86SX6 157 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 TAX1BP1Q86VP1 789 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 THOC6Q86W42 341 aaKnown RBP9.15□□□□□ -0.94
RFX3-201ENST00000302303 SYTL1Q8IYJ3 562 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 KIAA2013Q8IYS2 634 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 Q8N9G6 341 aaPredicted RBP9.15□□□□□ -0.94
RFX3-201ENST00000302303 OR6C4Q8NGE1 309 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 IFI44Q8TCB0 444 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 MGARPQ8TDB4 240 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 SMPDL3AQ92484 453 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 SLC32A1Q9H598 525 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 HRASLS2Q9NWW9 162 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 SEMA5BQ9P283 1151 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 PDP2Q9P2J9 529 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 LNPEPQ9UIQ6 1025 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 TMCO1Q9UM00 188 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 PCNX2A6NKB5 2137 aa9.15□□□□□ -0.94
RFX3-201ENST00000302303 PIPSLA2A3N6 862 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 K7EPI3 171 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 TNFSF14O43557 240 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 KIF1CO43896 1103 aaKnown RBP9.15□□□□□ -0.95
RFX3-201ENST00000302303 PRAMEF10O60809 474 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 SMIM24O75264 130 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 WFS1O76024 890 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 UGT2B7P16662 529 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 CD22P20273 847 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 TAC1P20366 129 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 BGNP21810 368 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 OAS2P29728 719 aaKnown RBP9.15□□□□□ -0.95
RFX3-201ENST00000302303 CAPZBP47756 277 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 GFERP55789 205 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 PRDX1Q06830 199 aaKnown RBP9.15□□□□□ -0.95
RFX3-201ENST00000302303 KIR2DS3Q14952 304 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 PLCL1Q15111 1095 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 ZIC1Q15915 447 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 KIAA1614Q5VZ46 1190 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 METTL2BQ6P1Q9 378 aaKnown RBP9.15□□□□□ -0.95
RFX3-201ENST00000302303 LCTLQ6UWM7 567 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 SLCO4C1Q6ZQN7 724 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 USP53Q70EK8 1073 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 GOLGA7Q7Z5G4 137 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 SLCO6A1Q86UG4 719 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 SLC22A9Q8IVM8 553 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 TCAIMQ8N3R3 496 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 OR2L3Q8NG85 312 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 OR4K1Q8NGD4 311 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 OR52B6Q8NGF0 335 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 ATL1Q8WXF7 558 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 NAT6Q93015 286 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 NEIL2Q969S2 332 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 PRR11Q96HE9 360 aaPredicted RBP9.15□□□□□ -0.95
RFX3-201ENST00000302303 NUDT22Q9BRQ3 303 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 ACAT2Q9BWD1 397 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 RAB11FIP5Q9BXF6 653 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 IQCGQ9H095 443 aaKnown RBP9.15□□□□□ -0.95
RFX3-201ENST00000302303 SPNS1Q9H2V7 528 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 SLC6A20Q9NP91 592 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 CUEDC1Q9NWM3 386 aaPredicted RBP9.15□□□□□ -0.95
RFX3-201ENST00000302303 KCNK4Q9NYG8 393 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 ACTR10Q9NZ32 417 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 WWOXQ9NZC7 414 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 FTSJ1Q9UET6 329 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 TAC3Q9UHF0 121 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 POMT2Q9UKY4 750 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 ATXN7L1Q9ULK2 861 aaPredicted RBP9.15□□□□□ -0.95
RFX3-201ENST00000302303 KLK4Q9Y5K2 254 aa9.15□□□□□ -0.95
RFX3-201ENST00000302303 MN1Q10571 1320 aaPredicted RBP9.14□□□□□ -0.95
RFX3-201ENST00000302303 KCNE1BA0A087WTH5 132 aa9.14□□□□□ -0.95
RFX3-201ENST00000302303 GIPC1O14908 333 aa9.14□□□□□ -0.95
RFX3-201ENST00000302303 HCRTR1O43613 425 aa9.14□□□□□ -0.95
RFX3-201ENST00000302303 CCNT2O60583 730 aaKnown RBP9.14□□□□□ -0.95
RFX3-201ENST00000302303 SNNO75324 88 aaPredicted RBP9.14□□□□□ -0.95
RFX3-201ENST00000302303 WDR47O94967 919 aa9.14□□□□□ -0.95
RFX3-201ENST00000302303 GP1BAP07359 652 aa9.14□□□□□ -0.95
RFX3-201ENST00000302303 CHRNGP07510 517 aa9.14□□□□□ -0.95
RFX3-201ENST00000302303 GRIA3P42263 894 aa9.14□□□□□ -0.95
RFX3-201ENST00000302303 PDX1P52945 283 aa9.14□□□□□ -0.95
RFX3-201ENST00000302303 GYS2P54840 703 aa9.14□□□□□ -0.95
RFX3-201ENST00000302303 ERVPABLB-1P60509 514 aa9.14□□□□□ -0.95
RFX3-201ENST00000302303 SH3BP2P78314 561 aa9.14□□□□□ -0.95
RFX3-201ENST00000302303 GPLD1P80108 840 aa9.14□□□□□ -0.95
RFX3-201ENST00000302303 CLCQ05315 142 aa9.14□□□□□ -0.95
RFX3-201ENST00000302303 TRAF3Q13114 568 aa9.14□□□□□ -0.95
RFX3-201ENST00000302303 HSP90B2PQ58FF3 399 aa9.14□□□□□ -0.95
RFX3-201ENST00000302303 CATSPEREQ5SY80 951 aa9.14□□□□□ -0.95
RFX3-201ENST00000302303 ICE2Q659A1 982 aa9.14□□□□□ -0.95
RFX3-201ENST00000302303 FCRL6Q6DN72 434 aa9.14□□□□□ -0.95
RFX3-201ENST00000302303 ZNF425Q6IV72 752 aa9.14□□□□□ -0.95
RFX3-201ENST00000302303 CAPN13Q6MZZ7 669 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms