RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 ARMC1Q9NVT9 282 aa21.33■■□□□ 1.01
TPM4-201ENST00000300933 ACTR3BQ9P1U1 418 aa21.33■■□□□ 1.01
TPM4-201ENST00000300933 FADS3Q9Y5Q0 445 aa21.33■■□□□ 1.01
TPM4-201ENST00000300933 B4GAT1O43505 415 aa21.32■■□□□ 1
TPM4-201ENST00000300933 CA3P07451 260 aa21.32■■□□□ 1
TPM4-201ENST00000300933 EBLN1P0CF75 366 aa21.32■■□□□ 1
TPM4-201ENST00000300933 PFKLP17858 780 aa21.32■■□□□ 1
TPM4-201ENST00000300933 TACR1P25103 407 aa21.32■■□□□ 1
TPM4-201ENST00000300933 PTPN5P54829 565 aa21.32■■□□□ 1
TPM4-201ENST00000300933 GRIK2Q13002 908 aa21.32■■□□□ 1
TPM4-201ENST00000300933 LDLRAP1Q5SW96 308 aa21.32■■□□□ 1
TPM4-201ENST00000300933 GALNT18Q6P9A2 607 aa21.32■■□□□ 1
TPM4-201ENST00000300933 ANKRD46Q86W74 232 aa21.32■■□□□ 1
TPM4-201ENST00000300933 RASGEF1AQ8N9B8 481 aa21.32■■□□□ 1
TPM4-201ENST00000300933 MFSD2AQ8NA29 543 aa21.32■■□□□ 1
TPM4-201ENST00000300933 SMG7Q92540 1137 aaKnown RBP21.32■■□□□ 1
TPM4-201ENST00000300933 EGLN2Q96KS0 407 aa21.32■■□□□ 1
TPM4-201ENST00000300933 PPP3R2Q96LZ3 170 aa21.32■■□□□ 1
TPM4-201ENST00000300933 TSSK3Q96PN8 268 aa21.32■■□□□ 1
TPM4-201ENST00000300933 SLC12A9Q9BXP2 914 aa21.32■■□□□ 1
TPM4-201ENST00000300933 IKZF5Q9H5V7 419 aa21.32■■□□□ 1
TPM4-201ENST00000300933 SLC6A13Q9NSD5 602 aa21.32■■□□□ 1
TPM4-201ENST00000300933 CCM2LQ9NUG4 571 aaPredicted RBP21.32■■□□□ 1
TPM4-201ENST00000300933 K7ESM1 405 aa21.32■■□□□ 1
TPM4-201ENST00000300933 KCNH1O95259 989 aa21.32■■□□□ 1
TPM4-201ENST00000300933 CISD3P0C7P0 127 aa21.32■■□□□ 1
TPM4-201ENST00000300933 ELFN1P0C7U0 828 aa21.32■■□□□ 1
TPM4-201ENST00000300933 MATN1P21941 496 aa21.32■■□□□ 1
TPM4-201ENST00000300933 EEF1B2P24534 225 aaKnown RBP21.32■■□□□ 1
TPM4-201ENST00000300933 ZNF805Q5CZA5 627 aa21.32■■□□□ 1
TPM4-201ENST00000300933 ADGRG5Q8IZF4 528 aa21.32■■□□□ 1
TPM4-201ENST00000300933 ZNF420Q8TAQ5 688 aaPredicted RBP21.32■■□□□ 1
TPM4-201ENST00000300933 GOLGA4Q13439 2230 aaKnown RBP21.32■■□□□ 1
TPM4-201ENST00000300933 NOL3O60936 208 aaKnown RBP21.32■■□□□ 1
TPM4-201ENST00000300933 CYP2A6P11509 494 aaPredicted RBP21.32■■□□□ 1
TPM4-201ENST00000300933 PDHA2P29803 388 aa21.32■■□□□ 1
TPM4-201ENST00000300933 DDX39BQ13838 428 aaKnown RBP21.32■■□□□ 1
TPM4-201ENST00000300933 HID1Q8IV36 788 aa21.32■■□□□ 1
TPM4-201ENST00000300933 MAGEE2Q8TD90 523 aaPredicted RBP21.32■■□□□ 1
TPM4-201ENST00000300933 AP2M1Q96CW1 435 aa21.32■■□□□ 1
TPM4-201ENST00000300933 AURKBQ96GD4 344 aaPredicted RBP21.32■■□□□ 1
TPM4-201ENST00000300933 TBCDQ9BTW9 1192 aa21.32■■□□□ 1
TPM4-201ENST00000300933 DPY30Q9C005 99 aa21.32■■□□□ 1
TPM4-201ENST00000300933 EIF3LQ9Y262 564 aaKnown RBP21.32■■□□□ 1
TPM4-201ENST00000300933 GSNP06396 782 aa21.31■■□□□ 1
TPM4-201ENST00000300933 CBSLP0DN79 551 aa21.31■■□□□ 1
TPM4-201ENST00000300933 HRH2P25021 359 aa21.31■■□□□ 1
TPM4-201ENST00000300933 FASP25445 335 aa21.31■■□□□ 1
TPM4-201ENST00000300933 CBSP35520 551 aa21.31■■□□□ 1
TPM4-201ENST00000300933 TMED10P49755 219 aaKnown RBP21.31■■□□□ 1
TPM4-201ENST00000300933 EIF2B2P49770 351 aaKnown RBP21.31■■□□□ 1
TPM4-201ENST00000300933 NFATC3Q12968 1075 aa21.31■■□□□ 1
TPM4-201ENST00000300933 MOGQ16653 247 aa21.31■■□□□ 1
TPM4-201ENST00000300933 HENMT1Q5T8I9 393 aaKnown RBP21.31■■□□□ 1
TPM4-201ENST00000300933 ABRAXAS1Q6UWZ7 409 aa21.31■■□□□ 1
TPM4-201ENST00000300933 MED8Q96G25 268 aa21.31■■□□□ 1
TPM4-201ENST00000300933 DOK1Q99704 481 aa21.31■■□□□ 1
TPM4-201ENST00000300933 ELOVL6Q9H5J4 265 aa21.31■■□□□ 1
TPM4-201ENST00000300933 CFAP99D6REC4 459 aa21.31■■□□□ 1
TPM4-201ENST00000300933 BCKDHAP12694 445 aa21.31■■□□□ 1
TPM4-201ENST00000300933 IL10P22301 178 aa21.31■■□□□ 1
TPM4-201ENST00000300933 PSMA4P25789 261 aaKnown RBP21.31■■□□□ 1
TPM4-201ENST00000300933 POLR2IP36954 125 aaKnown RBP21.31■■□□□ 1
TPM4-201ENST00000300933 COQ5Q5HYK3 327 aa21.31■■□□□ 1
TPM4-201ENST00000300933 INTS11Q5TA45 600 aaKnown RBP21.31■■□□□ 1
TPM4-201ENST00000300933 ADNP2Q6IQ32 1131 aa21.31■■□□□ 1
TPM4-201ENST00000300933 TMEM53Q6P2H8 277 aa21.31■■□□□ 1
TPM4-201ENST00000300933 LIPIQ6XZB0 460 aa21.31■■□□□ 1
TPM4-201ENST00000300933 TSPEARQ8WU66 669 aa21.31■■□□□ 1
TPM4-201ENST00000300933 ZUFSPQ96AP4 578 aa21.31■■□□□ 1
TPM4-201ENST00000300933 CGREF1Q99674 301 aa21.31■■□□□ 1
TPM4-201ENST00000300933 AGPAT4Q9NRZ5 378 aa21.31■■□□□ 1
TPM4-201ENST00000300933 TCF20Q9UGU0 1960 aaKnown RBP21.31■■□□□ 1
TPM4-201ENST00000300933 HTR3EA5X5Y0 456 aa21.3■■□□□ 1
TPM4-201ENST00000300933 NUAK1O60285 661 aa21.3■■□□□ 1
TPM4-201ENST00000300933 C1QCP02747 245 aa21.3■■□□□ 1
TPM4-201ENST00000300933 TSTA3Q13630 321 aaPredicted RBP21.3■■□□□ 1
TPM4-201ENST00000300933 SPIDRQ14159 915 aa21.3■■□□□ 1
TPM4-201ENST00000300933 KIAA0040Q15053 153 aa21.3■■□□□ 1
TPM4-201ENST00000300933 RGS21Q2M5E4 152 aa21.3■■□□□ 1
TPM4-201ENST00000300933 LCN8Q6JVE9 175 aa21.3■■□□□ 1
TPM4-201ENST00000300933 KIAA0907Q7Z7F0 614 aaPredicted RBP21.3■■□□□ 1
TPM4-201ENST00000300933 RAVER1Q8IY67 606 aaKnown RBP21.3■■□□□ 1
TPM4-201ENST00000300933 PHACTR4Q8IZ21 702 aa21.3■■□□□ 1
TPM4-201ENST00000300933 CHPT1Q8WUD6 406 aa21.3■■□□□ 1
TPM4-201ENST00000300933 UBTD2Q8WUN7 234 aa21.3■■□□□ 1
TPM4-201ENST00000300933 C19orf43Q9BQ61 176 aa21.3■■□□□ 1
TPM4-201ENST00000300933 THUMPD3Q9BV44 507 aaKnown RBP21.3■■□□□ 1
TPM4-201ENST00000300933 EBPLQ9BY08 206 aa21.3■■□□□ 1
TPM4-201ENST00000300933 PABPN1LA6NDY0 278 aaKnown RBP21.3■■□□□ 1
TPM4-201ENST00000300933 AREL1O15033 823 aa21.3■■□□□ 1
TPM4-201ENST00000300933 FGF19O95750 216 aa21.3■■□□□ 1
TPM4-201ENST00000300933 PCNAP12004 261 aa21.3■■□□□ 1
TPM4-201ENST00000300933 BDKRB1P46663 353 aa21.3■■□□□ 1
TPM4-201ENST00000300933 DMC1Q14565 340 aa21.3■■□□□ 1
TPM4-201ENST00000300933 PYCR3Q53H96 274 aa21.3■■□□□ 1
TPM4-201ENST00000300933 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.3■■□□□ 1
TPM4-201ENST00000300933 BPIFB6Q8NFQ5 453 aa21.3■■□□□ 1
TPM4-201ENST00000300933 APIPQ96GX9 242 aa21.3■■□□□ 1
TPM4-201ENST00000300933 TRPS1Q9UHF7 1281 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms