RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 PON2Q15165 354 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 SKIV2LQ15477 1246 aaKnown RBP12.97□□□□□ -0.33
CASC4-201ENST00000299957 MOGQ16653 247 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 ZSWIM7Q19AV6 140 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 LRRC66Q68CR7 880 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 PROKR1Q8TCW9 393 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 KLK6Q92876 244 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 RAB8BQ92930 207 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 PSKH2Q96QS6 385 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 TEX12Q9BXU0 123 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 FAM83DQ9H4H8 585 aa12.97□□□□□ -0.33
CASC4-201ENST00000299957 H3BM21 787 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 SEPT4O43236 478 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 SMAD6O43541 496 aaKnown RBP12.96□□□□□ -0.33
CASC4-201ENST00000299957 SLC28A2O43868 658 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 PDYNP01213 254 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 IFNA14P01570 189 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 ELFN1P0C7U0 828 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 MYL12AP19105 171 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 RPS26P62854 115 aaKnown RBP12.96□□□□□ -0.33
CASC4-201ENST00000299957 EMX2Q04743 252 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 FAM131AQ6UXB0 335 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 TRIM48Q8IWZ4 208 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 PACRGLQ8N7B6 248 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 C11orf65Q8NCR3 313 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 ABHD11Q8NFV4 315 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 ASZ1Q8WWH4 475 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 RNFT2Q96EX2 444 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 CDK5RAP1Q96SZ6 601 aaKnown RBP12.96□□□□□ -0.33
CASC4-201ENST00000299957 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.96□□□□□ -0.33
CASC4-201ENST00000299957 HMX1Q9NP08 348 aaPredicted RBP12.96□□□□□ -0.33
CASC4-201ENST00000299957 AGPAT4Q9NRZ5 378 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 CLN6Q9NWW5 311 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 TVP23BQ9NYZ1 205 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 BCAS1O75363 584 aaPredicted RBP12.96□□□□□ -0.33
CASC4-201ENST00000299957 C8BP07358 591 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 POLR2EP19388 210 aaKnown RBP12.96□□□□□ -0.33
CASC4-201ENST00000299957 BDKRB1P46663 353 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 RNF144AP50876 292 aaPredicted RBP12.96□□□□□ -0.33
CASC4-201ENST00000299957 CLEC12AQ5QGZ9 265 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 RGMBQ6NW40 437 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 ERAP2Q6P179 960 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 OTOP2Q7RTS6 562 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 OR2T11Q8NH01 316 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 ARRDC2Q8TBH0 407 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 BTN2A2Q8WVV5 523 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 SLCO4A1Q96BD0 722 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 TPT1P8Q9HAU6 139 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 BMP10O95393 424 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 ZNF865P0CJ78 1059 aaPredicted RBP12.96□□□□□ -0.33
CASC4-201ENST00000299957 FSHRP23945 695 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 HLCSP50747 726 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 TXNL4AP83876 142 aaKnown RBP12.96□□□□□ -0.33
CASC4-201ENST00000299957 GPAT3Q53EU6 434 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 FRG2Q64ET8 278 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 LCN8Q6JVE9 175 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 TMEM220Q6QAJ8 160 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 SIX5Q8N196 739 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 NDNFQ8TB73 568 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 DOK4Q8TEW6 326 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 AP2M1Q96CW1 435 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 PYURFQ96I23 114 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 FRG2BQ96QU4 278 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 ATOH8Q96SQ7 321 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 NLE1Q9NVX2 485 aaPredicted RBP12.96□□□□□ -0.33
CASC4-201ENST00000299957 GPRC5BQ9NZH0 403 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 PCDHB14Q9Y5E9 798 aa12.96□□□□□ -0.33
CASC4-201ENST00000299957 PAPSS2O95340 614 aaPredicted RBP12.96□□□□□ -0.34
CASC4-201ENST00000299957 EIF2S1P05198 315 aaKnown RBP12.96□□□□□ -0.34
CASC4-201ENST00000299957 MYF6P23409 242 aa12.96□□□□□ -0.34
CASC4-201ENST00000299957 ACLYP53396 1101 aa12.96□□□□□ -0.34
CASC4-201ENST00000299957 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.96□□□□□ -0.342e-6■■■■□ 26.1
CASC4-201ENST00000299957 SLC7A5P1Q8MH63 180 aa12.96□□□□□ -0.34
CASC4-201ENST00000299957 LGI4Q8N135 537 aa12.96□□□□□ -0.34
CASC4-201ENST00000299957 S100ZQ8WXG8 99 aa12.96□□□□□ -0.34
CASC4-201ENST00000299957 FOXJ1Q92949 421 aa12.96□□□□□ -0.34
CASC4-201ENST00000299957 FUBP3Q96I24 572 aaKnown RBP eCLIP12.96□□□□□ -0.346e-7■■□□□ 12.8
CASC4-201ENST00000299957 CEP295NLQ96MC4 621 aa12.96□□□□□ -0.34
CASC4-201ENST00000299957 FAM210AQ96ND0 272 aa12.96□□□□□ -0.34
CASC4-201ENST00000299957 DEFB118Q96PH6 123 aa12.96□□□□□ -0.34
CASC4-201ENST00000299957 TIGARQ9NQ88 270 aa12.96□□□□□ -0.34
CASC4-201ENST00000299957 GIN1Q9NXP7 522 aa12.96□□□□□ -0.34
CASC4-201ENST00000299957 PLAGL1Q9UM63 463 aa12.96□□□□□ -0.34
CASC4-201ENST00000299957 GPR45Q9Y5Y3 372 aa12.96□□□□□ -0.34
CASC4-201ENST00000299957 MAST2Q6P0Q8 1798 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 CH25HO95992 272 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 TACR1P25103 407 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 SLC6A4P31645 630 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 KRT20P35900 424 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 CACTIN-AS1Q8N1I8 211 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 OR10G2Q8NGC3 310 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 ZFP90Q8TF47 636 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 KCNJ9Q92806 393 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 UBXN10Q96LJ8 280 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 YIPF2Q9BWQ6 316 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 NKIRAS2Q9NYR9 191 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 PRKAG2Q9UGJ0 569 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 GTF2A1LQ9UNN4 478 aa12.95□□□□□ -0.34
CASC4-201ENST00000299957 OAS3Q9Y6K5 1087 aaKnown RBP12.95□□□□□ -0.34
CASC4-201ENST00000299957 ARFGEF1Q9Y6D6 1849 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms