RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 CD274Q9NZQ7 290 aa13.17□□□□□ -0.3
RPUSD4-201ENST00000298317 KIF17Q9P2E2 1029 aa13.17□□□□□ -0.3
RPUSD4-201ENST00000298317 RIMKLBQ9ULI2 386 aa13.17□□□□□ -0.3
RPUSD4-201ENST00000298317 CSADQ9Y600 493 aa13.17□□□□□ -0.3
RPUSD4-201ENST00000298317 PCM1Q15154 2024 aa13.17□□□□□ -0.3
RPUSD4-201ENST00000298317 SNTNA6NMZ2 147 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 OR7A17O14581 309 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 PER2O15055 1255 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 SLITRK5O94991 958 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 ADORA3P0DMS8 318 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 SLC2A4P14672 509 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 HNF4AP41235 474 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 RGS6P49758 472 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 CAMK2GQ13555 558 aaPredicted RBP13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 LRIF1Q5T3J3 769 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 CYP4Z2PQ8N1L4 340 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 DNAJC22Q8N4W6 341 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 SLC7A6Q92536 515 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 HMCESQ96FZ2 354 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 OSMRQ99650 979 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 CHCHD6Q9BRQ6 235 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 GABARAPL3Q9BY60 117 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 DPY30Q9C005 99 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 TNKS2Q9H2K2 1166 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 SIRT5Q9NXA8 310 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 CFL2Q9Y281 166 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 HS3ST4Q9Y661 456 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 CCNDBP1O95273 360 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 FGF1P05230 155 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 CNPP09543 421 aaKnown RBP13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 PKLRP30613 574 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 TIE1P35590 1138 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 PRIM2P49643 509 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 TOR1AIP1Q5JTV8 583 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 MSANTD2Q6P1R3 559 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 UMODL1-AS1Q8N2C9 162 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 ATG16L2Q8NAA4 619 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 ARRDC4Q8NCT1 418 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 ST13P5Q8NFI4 369 aaPredicted RBP13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 DNAJB8Q8NHS0 232 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 PPTC7Q8NI37 304 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 CDKN2AIPNLQ96HQ2 116 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 GON7Q9BXV9 100 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 KLK4Q9Y5K2 254 aa13.16□□□□□ -0.3
RPUSD4-201ENST00000298317 A0A075B6Q4 140 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 A0A0X1KG70 313 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 KDM4FA0A1W2PPD8 638 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 CLCA1A8K7I4 914 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 H3BRB1 525 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 CTDSP2O14595 271 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 WNT9AO14904 365 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 ERN1O75460 977 aaKnown RBP13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 ZNF682O95780 498 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 HAPLN1P10915 354 aaPredicted RBP13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 IL7P13232 177 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 HOXB9P17482 250 aaPredicted RBP13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 HLA-DPA1P20036 260 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 LHX1P48742 406 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 ABHD18Q0P651 414 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 IRF3Q14653 427 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 GOLGA7Q7Z5G4 137 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 CCDC28AQ8IWP9 274 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 OR8H2Q8N162 312 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 CHCHD4Q8N4Q1 142 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 KRTCAP2Q8N6L1 136 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 LILRB1Q8NHL6 650 aaPredicted RBP13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 GGHQ92820 318 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 SENP8Q96LD8 212 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 CEP19Q96LK0 163 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 PSKH2Q96QS6 385 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 OR52E6Q96RD3 313 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 TRIM62Q9BVG3 475 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 ZNF304Q9HCX3 659 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 GIMAP4Q9NUV9 329 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 SAMHD1Q9Y3Z3 626 aaKnown RBP13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 PLXNB2O15031 1838 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 DIRAS1O95057 198 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 FABP3P05413 133 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 MAD2L1Q13257 205 aaPredicted RBP13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 GALNT3Q14435 633 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 PCBP1Q15365 356 aaKnown RBP eCLIP13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 PCBP2Q15366 365 aaKnown RBP eCLIP13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 GPAT3Q53EU6 434 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 ARMCX4Q5H9R4 360 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 MICALL2Q8IY33 904 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 LIX1Q8N485 282 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 FYTTD1Q96QD9 318 aaKnown RBP13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 QTRT2Q9H974 415 aaKnown RBP13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 ZNF408Q9H9D4 720 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 C3orf14Q9HBI5 128 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 TRIM39Q9HCM9 518 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 RANGRFQ9HD47 186 aaPredicted RBP13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 SERHLQ9NQF3 203 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 ASAH2Q9NR71 780 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 STMN3Q9NZ72 180 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 NUDT4Q9NZJ9 180 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 MAN2B2Q9Y2E5 1009 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 PCDHB5Q9Y5E4 795 aa13.15□□□□□ -0.3
RPUSD4-201ENST00000298317 hCG_2039718K7EN88 272 aa13.14□□□□□ -0.31
RPUSD4-201ENST00000298317 POLR1CO15160 346 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms