RNA–Protein interactions for RNA: ENST00000278612.8

NPAT-201, Transcript of nuclear protein, coactivator of histone transcription, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NPAT, Length 6,117 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAT-201ENST00000278612 RPS10-NUDT3A0A1W2PQS6 291 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 OR2T8A6NH00 312 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 INAFM1C9JVW0 142 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 SLC16A3O15427 465 aaKnown RBP1.32□□□□□ -2.2
NPAT-201ENST00000278612 ANP32DO95626 131 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 TCF4P15884 667 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 MMP8P22894 467 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 PDX1P52945 283 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 ZFP36L1Q07352 338 aaKnown RBP1.32□□□□□ -2.2
NPAT-201ENST00000278612 SF3B4Q15427 424 aaKnown RBP eCLIP1.32□□□□□ -2.27e-7■■■■□ 22.9
NPAT-201ENST00000278612 TAF13Q15543 124 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 MIDNQ504T8 468 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 C10orf76Q5T2E6 689 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 KRT39Q6A163 491 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 WDR93Q6P2C0 686 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 ZNF788Q6ZQV5 615 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 FAM43BQ6ZT52 329 aaPredicted RBP1.32□□□□□ -2.2
NPAT-201ENST00000278612 CXXC5Q7LFL8 322 aaKnown RBP1.32□□□□□ -2.2
NPAT-201ENST00000278612 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP1.32□□□□□ -2.2
NPAT-201ENST00000278612 BMPERQ8N8U9 685 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 TFB1MQ8WVM0 346 aaKnown RBP1.32□□□□□ -2.2
NPAT-201ENST00000278612 JAKMIP2Q96AA8 810 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 CNPY3Q9BT09 278 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 SLC25A22Q9H936 323 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 HRASLS2Q9NWW9 162 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 CHORDC1Q9UHD1 332 aaPredicted RBP1.32□□□□□ -2.2
NPAT-201ENST00000278612 DAPK2Q9UIK4 370 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 PKP3Q9Y446 797 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 BAHCC1Q9P281 2608 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 RYR1P21817 5038 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 KIAA1551Q9HCM1 1747 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 HCFC1P51610 2035 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 IQANK1A0A1B0GTG1 560 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 OR6C68A6NDL8 312 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 ZSCAN5BA6NJL1 495 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 C2CD4BA6NLJ0 364 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 FOXO6A8MYZ6 492 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 C1QL1O75973 258 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 TMCC1O94876 653 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 GAS8O95995 478 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 LIPFP07098 398 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 SRD5A1P18405 259 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 TNFRSF1BP20333 461 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 ATP5F1P24539 256 aaPredicted RBP1.32□□□□□ -2.2
NPAT-201ENST00000278612 ATP12AP54707 1039 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 ELLP55199 621 aaPredicted RBP1.32□□□□□ -2.2
NPAT-201ENST00000278612 TIAL1Q01085 375 aaKnown RBP eCLIP1.32□□□□□ -2.2
NPAT-201ENST00000278612 BNC1Q01954 994 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 UNC50Q53HI1 259 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 CCDC178Q5BJE1 867 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 C6orf183Q5T699 404 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 CCNI2Q6ZMN8 369 aaPredicted RBP1.32□□□□□ -2.2
NPAT-201ENST00000278612 CCDC73Q6ZRK6 1079 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 FASTKD5Q7L8L6 764 aaKnown RBP1.32□□□□□ -2.2
NPAT-201ENST00000278612 EPHX4Q8IUS5 362 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 KLHL7Q8IXQ5 586 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 CIARTQ8N365 385 aaPredicted RBP1.32□□□□□ -2.2
NPAT-201ENST00000278612 RP9Q8TA86 221 aaKnown RBP1.32□□□□□ -2.2
NPAT-201ENST00000278612 CREB3L4Q8TEY5 395 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 DHX58Q96C10 678 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 ZNF274Q96GC6 653 aaPredicted RBP1.32□□□□□ -2.2
NPAT-201ENST00000278612 CXorf58Q96LI9 332 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 ZNF778Q96MU6 729 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 RBM4Q9BWF3 364 aaKnown RBP1.32□□□□□ -2.2
NPAT-201ENST00000278612 ANKRD60Q9BZ19 345 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 XRN2Q9H0D6 950 aaKnown RBP eCLIP1.32□□□□□ -2.2
NPAT-201ENST00000278612 CST9LQ9H4G1 147 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 MTMR10Q9NXD2 777 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 ELOVL5Q9NYP7 299 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 DDX25Q9UHL0 483 aaKnown RBP1.32□□□□□ -2.2
NPAT-201ENST00000278612 TSPYL4Q9UJ04 414 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 TTLL3Q9Y4R7 772 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 CFAP65Q6ZU64 1925 aaKnown RBP1.32□□□□□ -2.2
NPAT-201ENST00000278612 NEURL4Q96JN8 1562 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 A0A1B0GU03 582 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 C7orf66A4D0T2 115 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 MYO1GB0I1T2 1018 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 H0Y9J4 135 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 GFYI3L273 518 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 GOLGA8RI6L899 631 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 TSPAN4O14817 238 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 NPFFO15130 113 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 ATP6V1G1O75348 118 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 SLC4A1P02730 911 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 NR3C1P04150 777 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 NUDT17P0C025 328 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 GCFC2P16383 781 aaKnown RBP1.32□□□□□ -2.2
NPAT-201ENST00000278612 GNA11P29992 359 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 SOAT1P35610 550 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 CCT5P48643 541 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 RAB7AP51149 207 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 GNB2P62879 340 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 CDK3Q00526 305 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 MBTD1Q05BQ5 628 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 IL11RAQ14626 422 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 ZNF169Q14929 603 aaPredicted RBP1.32□□□□□ -2.2
NPAT-201ENST00000278612 ANKRD1Q15327 319 aa1.32□□□□□ -2.2
NPAT-201ENST00000278612 TPD52L1Q16890 204 aaPredicted RBP1.32□□□□□ -2.2
NPAT-201ENST00000278612 PPP6R3Q5H9R7 873 aaPredicted RBP1.32□□□□□ -2.2
NPAT-201ENST00000278612 LCE3BQ5TA77 95 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms