RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 ACPTQ9BZG2 426 aa15.85■□□□□ 0.13
TPM1-201ENST00000267996 ELOVL6Q9H5J4 265 aa15.85■□□□□ 0.13
TPM1-201ENST00000267996 SLC52A3Q9NQ40 469 aa15.85■□□□□ 0.13
TPM1-201ENST00000267996 MOSPD1Q9UJG1 213 aa15.85■□□□□ 0.13
TPM1-201ENST00000267996 TRIOO75962 3097 aa15.84■□□□□ 0.13
TPM1-201ENST00000267996 IGHV1OR15-9A0A0B4J2B8 117 aa15.84■□□□□ 0.13
TPM1-201ENST00000267996 A8MUI8 341 aa15.84■□□□□ 0.13
TPM1-201ENST00000267996 FBP2O00757 339 aa15.84■□□□□ 0.13
TPM1-201ENST00000267996 NUDT2P50583 147 aa15.84■□□□□ 0.13
TPM1-201ENST00000267996 HMGCS1Q01581 520 aa15.84■□□□□ 0.13
TPM1-201ENST00000267996 CLCA4Q14CN2 919 aa15.84■□□□□ 0.13
TPM1-201ENST00000267996 UAP1L1Q3KQV9 507 aa15.84■□□□□ 0.13
TPM1-201ENST00000267996 WASH2PQ6VEQ5 465 aa15.84■□□□□ 0.13
TPM1-201ENST00000267996 ZFAND4Q86XD8 727 aa15.84■□□□□ 0.13
TPM1-201ENST00000267996 SCUBE1Q8IWY4 988 aa15.84■□□□□ 0.13
TPM1-201ENST00000267996 NEIL2Q969S2 332 aa15.84■□□□□ 0.13
TPM1-201ENST00000267996 BIRC7Q96CA5 298 aa15.84■□□□□ 0.13
TPM1-201ENST00000267996 C12orf66Q96MD2 445 aa15.84■□□□□ 0.13
TPM1-201ENST00000267996 IL17FQ96PD4 163 aa15.84■□□□□ 0.13
TPM1-201ENST00000267996 OSGEPL1Q9H4B0 414 aa15.84■□□□□ 0.13
TPM1-201ENST00000267996 EHD1Q9H4M9 534 aa15.84■□□□□ 0.13
TPM1-201ENST00000267996 LRTM1Q9HBL6 345 aa15.84■□□□□ 0.13
TPM1-201ENST00000267996 WASH6PQ9NQA3 447 aa15.84■□□□□ 0.13
TPM1-201ENST00000267996 CCDC177Q9NQR7 707 aaPredicted RBP15.84■□□□□ 0.13
TPM1-201ENST00000267996 GPR27Q9NS67 375 aa15.84■□□□□ 0.13
TPM1-201ENST00000267996 NOP53Q9NZM5 478 aaKnown RBP15.84■□□□□ 0.13
TPM1-201ENST00000267996 CFAP20Q9Y6A4 193 aaKnown RBP15.84■□□□□ 0.13
TPM1-201ENST00000267996 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.84■□□□□ 0.13
TPM1-201ENST00000267996 ANKRD28O15084 1053 aa15.83■□□□□ 0.13
TPM1-201ENST00000267996 NRP2O60462 931 aa15.83■□□□□ 0.13
TPM1-201ENST00000267996 RSL1D1O76021 490 aaKnown RBP15.83■□□□□ 0.13
TPM1-201ENST00000267996 RABIFP47224 123 aa15.83■□□□□ 0.13
TPM1-201ENST00000267996 ZFP36L2P47974 494 aaKnown RBP15.83■□□□□ 0.13
TPM1-201ENST00000267996 NEK2P51955 445 aa15.83■□□□□ 0.13
TPM1-201ENST00000267996 PRKG2Q13237 762 aa15.83■□□□□ 0.13
TPM1-201ENST00000267996 MAD2L1Q13257 205 aaPredicted RBP15.83■□□□□ 0.13
TPM1-201ENST00000267996 LRP8Q14114 963 aa15.83■□□□□ 0.13
TPM1-201ENST00000267996 KIAA0040Q15053 153 aa15.83■□□□□ 0.13
TPM1-201ENST00000267996 IMPG1Q17R60 797 aa15.83■□□□□ 0.13
TPM1-201ENST00000267996 WASHC2DQ5SRD0 308 aa15.83■□□□□ 0.13
TPM1-201ENST00000267996 IL23RQ5VWK5 629 aa15.83■□□□□ 0.13
TPM1-201ENST00000267996 ATG9BQ674R7 924 aa15.83■□□□□ 0.13
TPM1-201ENST00000267996 DUS1LQ6P1R4 473 aaKnown RBP15.83■□□□□ 0.13
TPM1-201ENST00000267996 BLOC1S3Q6QNY0 202 aa15.83■□□□□ 0.13
TPM1-201ENST00000267996 LCTLQ6UWM7 567 aa15.83■□□□□ 0.13
TPM1-201ENST00000267996 C16orf89Q6UX73 402 aa15.83■□□□□ 0.13
TPM1-201ENST00000267996 Q6ZSR6 202 aa15.83■□□□□ 0.13
TPM1-201ENST00000267996 UBALD2Q8IYN6 164 aa15.83■□□□□ 0.13
TPM1-201ENST00000267996 ULK2Q8IYT8 1036 aa15.83■□□□□ 0.13
TPM1-201ENST00000267996 DEFB107AQ8IZN7 70 aa15.83■□□□□ 0.13
TPM1-201ENST00000267996 LMNTD1Q8N9Z9 388 aa15.83■□□□□ 0.13
TPM1-201ENST00000267996 ORAI3Q9BRQ5 295 aa15.83■□□□□ 0.13
TPM1-201ENST00000267996 C1orf50Q9BV19 199 aa15.83■□□□□ 0.13
TPM1-201ENST00000267996 GPR174Q9BXC1 333 aa15.83■□□□□ 0.13
TPM1-201ENST00000267996 MRPL1Q9BYD6 325 aaKnown RBP15.83■□□□□ 0.13
TPM1-201ENST00000267996 C1orf109Q9NX04 203 aa15.83■□□□□ 0.13
TPM1-201ENST00000267996 NDE1Q9NXR1 346 aa15.83■□□□□ 0.13
TPM1-201ENST00000267996 PNMA8BQ9ULN7 279 aaPredicted RBP15.83■□□□□ 0.13
TPM1-201ENST00000267996 PLAGL1Q9UM63 463 aa15.83■□□□□ 0.13
TPM1-201ENST00000267996 SH2B3Q9UQQ2 575 aa15.83■□□□□ 0.13
TPM1-201ENST00000267996 TDRKHQ9Y2W6 561 aaKnown RBP15.83■□□□□ 0.13
TPM1-201ENST00000267996 DYRK1BQ9Y463 629 aa15.83■□□□□ 0.13
TPM1-201ENST00000267996 ZNF839A8K0R7 811 aa15.83■□□□□ 0.12
TPM1-201ENST00000267996 BBIP1A8MTZ0 92 aa15.83■□□□□ 0.12
TPM1-201ENST00000267996 SLC2A4P14672 509 aa15.83■□□□□ 0.12
TPM1-201ENST00000267996 THOP1P52888 689 aa15.83■□□□□ 0.12
TPM1-201ENST00000267996 CSTF3Q12996 717 aaKnown RBP15.83■□□□□ 0.12
TPM1-201ENST00000267996 ALG11Q2TAA5 492 aa15.83■□□□□ 0.12
TPM1-201ENST00000267996 REP15Q6BDI9 236 aa15.83■□□□□ 0.12
TPM1-201ENST00000267996 CYP20A1Q6UW02 462 aa15.83■□□□□ 0.12
TPM1-201ENST00000267996 ABRAXAS1Q6UWZ7 409 aa15.83■□□□□ 0.12
TPM1-201ENST00000267996 HACD2Q6Y1H2 254 aa15.83■□□□□ 0.12
TPM1-201ENST00000267996 PARP9Q8IXQ6 854 aa15.83■□□□□ 0.12
TPM1-201ENST00000267996 PGAM4Q8N0Y7 254 aa15.83■□□□□ 0.12
TPM1-201ENST00000267996 GJD3Q8N144 294 aa15.83■□□□□ 0.12
TPM1-201ENST00000267996 SPEM1Q8N4L4 309 aa15.83■□□□□ 0.12
TPM1-201ENST00000267996 MTFMTQ96DP5 389 aaKnown RBP15.83■□□□□ 0.12
TPM1-201ENST00000267996 CLPTM1LQ96KA5 538 aa15.83■□□□□ 0.12
TPM1-201ENST00000267996 TEX37Q96LM6 180 aa15.83■□□□□ 0.12
TPM1-201ENST00000267996 FERD3LQ96RJ6 166 aa15.83■□□□□ 0.12
TPM1-201ENST00000267996 NPAS2Q99743 824 aa15.83■□□□□ 0.12
TPM1-201ENST00000267996 ACTL8Q9H568 366 aa15.83■□□□□ 0.12
TPM1-201ENST00000267996 DENND2DQ9H6A0 471 aaPredicted RBP15.83■□□□□ 0.12
TPM1-201ENST00000267996 MVB12BQ9H7P6 319 aa15.83■□□□□ 0.12
TPM1-201ENST00000267996 TBC1D17Q9HA65 648 aa15.83■□□□□ 0.12
TPM1-201ENST00000267996 PCOLCE2Q9UKZ9 415 aa15.83■□□□□ 0.12
TPM1-201ENST00000267996 PRPF19Q9UMS4 504 aaKnown RBP15.83■□□□□ 0.12
TPM1-201ENST00000267996 PCDHGA11Q9Y5H2 935 aa15.83■□□□□ 0.12
TPM1-201ENST00000267996 SLC22A3O75751 556 aa15.82■□□□□ 0.12
TPM1-201ENST00000267996 C1GALT1C1LP0DN25 315 aa15.82■□□□□ 0.12
TPM1-201ENST00000267996 G6PDP11413 515 aa15.82■□□□□ 0.12
TPM1-201ENST00000267996 HSD3B1P14060 373 aa15.82■□□□□ 0.12
TPM1-201ENST00000267996 CAPN3P20807 821 aa15.82■□□□□ 0.12
TPM1-201ENST00000267996 HSD3B2P26439 372 aa15.82■□□□□ 0.12
TPM1-201ENST00000267996 VARSP26640 1264 aaKnown RBP15.82■□□□□ 0.12
TPM1-201ENST00000267996 NME5P56597 212 aa15.82■□□□□ 0.12
TPM1-201ENST00000267996 SRP54P61011 504 aaKnown RBP15.82■□□□□ 0.12
TPM1-201ENST00000267996 UFM1P61960 85 aa15.82■□□□□ 0.12
TPM1-201ENST00000267996 RPL38P63173 70 aaKnown RBP15.82■□□□□ 0.12
TPM1-201ENST00000267996 ART3Q13508 389 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms