RNA–Protein interactions for RNA: ENST00000238112.7

CPSF3-201, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-201ENST00000238112 HSPA14Q0VDF9 509 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 CTF1Q16619 201 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 OR4F3Q6IEY1 312 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 OR2T5Q6IEZ7 315 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 IGFN1Q86VF2 1251 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 ZSWIM9Q86XI8 627 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 ELMOD1Q8N336 334 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 PARP8Q8N3A8 854 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 ARL14EPQ8N8R7 260 aaPredicted RBP18.21■□□□□ 0.51
CPSF3-201ENST00000238112 OR2T29Q8NH02 315 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 APIPQ96GX9 242 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 VN1R3Q9BXE9 311 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 GABARAPL1Q9H0R8 117 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 TM9SF3Q9HD45 589 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 ABCG2Q9UNQ0 655 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 TPRKBQ9Y3C4 175 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 PCDHGB1Q9Y5G3 927 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 CPQQ9Y646 472 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 AGAP14A8MT82 685 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 M0QX08 132 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 PRRG1O14668 218 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 C8GP07360 202 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 OR56A5P0C7T3 313 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 PCSK2P16519 638 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 PRPH2P23942 346 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 PTPN5P54829 565 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 SLC14A1Q13336 389 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 SIM2Q14190 667 aaPredicted RBP18.21■□□□□ 0.51
CPSF3-201ENST00000238112 ZNF846Q147U1 533 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 LAPTM4AQ15012 233 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 ACOX1Q15067 660 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 TCTN1Q2MV58 587 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 CARD16Q5EG05 197 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 TPGS2Q68CL5 300 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 CRTC1Q6UUV9 634 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 MSANTD1Q6ZTZ1 278 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 DNAJB7Q7Z6W7 309 aaPredicted RBP18.21■□□□□ 0.51
CPSF3-201ENST00000238112 SERPINA11Q86U17 422 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 CYP4Z1Q86W10 505 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 FAR1Q8WVX9 515 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 TBC1D20Q96BZ9 403 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 SLC12A9Q9BXP2 914 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 IL1RAPQ9NPH3 570 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 AASDHPPTQ9NRN7 309 aa18.21■□□□□ 0.51
CPSF3-201ENST00000238112 THG1LQ9NWX6 298 aaKnown RBP18.21■□□□□ 0.51
CPSF3-201ENST00000238112 CASP8AP2Q9UKL3 1982 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 KCNE1BA0A087WTH5 132 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 SOBPA7XYQ1 873 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 EIF3FO00303 357 aaPredicted RBP18.2■□□□□ 0.5
CPSF3-201ENST00000238112 GFRA2O00451 464 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 ZSCAN9O15535 394 aaPredicted RBP18.2■□□□□ 0.5
CPSF3-201ENST00000238112 GREM1O60565 184 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 FMO3P31513 532 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 BOP1Q14137 746 aaKnown RBP18.2■□□□□ 0.5
CPSF3-201ENST00000238112 LRRC66Q68CR7 880 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 ZCCHC8Q6NZY4 707 aaKnown RBP18.2■□□□□ 0.5
CPSF3-201ENST00000238112 Q6ZNB5 142 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 CRIPAKQ8N1N5 446 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 OR7A2PQ8NGA2 310 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 ADAMTS19Q8TE59 1207 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 PYCR2Q96C36 320 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 SH3YL1Q96HL8 342 aaPredicted RBP18.2■□□□□ 0.5
CPSF3-201ENST00000238112 EGLN2Q96KS0 407 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 HMG20AQ9NP66 347 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 SCN3BQ9NY72 215 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 FBXO10Q9UK96 956 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 INTS6Q9UL03 887 aaKnown RBP18.2■□□□□ 0.5
CPSF3-201ENST00000238112 DOLKQ9UPQ8 538 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 HTTP42858 3142 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.2■□□□□ 0.5
CPSF3-201ENST00000238112 CLDN25C9JDP6 229 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 MAN1A2O60476 641 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 FUCA1P04066 466 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 PORP16435 677 aaPredicted RBP18.2■□□□□ 0.5
CPSF3-201ENST00000238112 HNMTP50135 292 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 KEAP1Q14145 624 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 PTCHD3Q3KNS1 767 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 ATP13A5Q4VNC0 1218 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 TPRG1Q6ZUI0 275 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 ZNF551Q7Z340 670 aaPredicted RBP18.2■□□□□ 0.5
CPSF3-201ENST00000238112 B3GNT8Q7Z7M8 397 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 TMEM150AQ86TG1 271 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 HORMAD1Q86X24 394 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 SLC22A15Q8IZD6 547 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 OR2AP1Q8NGE2 309 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 CSGALNACT1Q8TDX6 532 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 ZNF641Q96N77 438 aaPredicted RBP18.2■□□□□ 0.5
CPSF3-201ENST00000238112 PANX1Q96RD7 426 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 LYSMD1Q96S90 227 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 BARD1Q99728 777 aaKnown RBP18.2■□□□□ 0.5
CPSF3-201ENST00000238112 BCL7BQ9BQE9 202 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 ERVK-18Q9QC07 812 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 RPS6KA6Q9UK32 745 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 GMPPBQ9Y5P6 360 aa18.2■□□□□ 0.5
CPSF3-201ENST00000238112 FPGTO14772 594 aa18.19■□□□□ 0.5
CPSF3-201ENST00000238112 GABARAPO95166 117 aa18.19■□□□□ 0.5
CPSF3-201ENST00000238112 FABP3P05413 133 aa18.19■□□□□ 0.5
CPSF3-201ENST00000238112 AMD1P17707 334 aa18.19■□□□□ 0.5
CPSF3-201ENST00000238112 DAPP51397 102 aa18.19■□□□□ 0.5
CPSF3-201ENST00000238112 BCAP31P51572 246 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms