RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 DNASE1L2Q92874 299 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 SMURF1Q9HCE7 757 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 TMPRSS4Q9NRS4 437 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 RELAQ04206 551 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 ZNF33AQ06730 810 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 GRK1Q15835 563 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 LRRC70Q7Z2Q7 622 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 C12orf29Q8N999 325 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 FCRL5Q96RD9 977 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 ZNF487B1APH4 448 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 ITGB5P18084 799 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 SREBF2Q12772 1141 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 PLEKHN1Q494U1 663 aaPredicted RBP8.04□□□□□ -1.12
APOB-201ENST00000233242 FAM46CQ5VWP2 391 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 GDPD1Q8N9F7 314 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 CXorf40BQ96DE9 158 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 KCNC2Q96PR1 638 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 PLEKHA1Q9HB21 404 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 HCN3Q9P1Z3 774 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 AFF1P51825 1210 aaKnown RBP8.04□□□□□ -1.12
APOB-201ENST00000233242 FGL1Q08830 312 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 ARRDC4Q8NCT1 418 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 WACQ9BTA9 647 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 PIGBOS1A0A0B4J2F0 54 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 DUXAA6NLW8 204 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 CLIC1O00299 241 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 PSEN2P49810 448 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 NFATC3Q12968 1075 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 GRIK2Q13002 908 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 USP41Q3LFD5 358 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 CARM1Q86X55 608 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 KIAA0319LQ8IZA0 1049 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 GRIN3AQ8TCU5 1115 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 SUSD6Q92537 303 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 HSH2DQ96JZ2 352 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 HNRNPABQ99729 332 aaKnown RBP8.04□□□□□ -1.12
APOB-201ENST00000233242 TMEM184CQ9NVA4 438 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 EDARQ9UNE0 448 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 E9PAM4 449 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 BMP2P12643 396 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 KCNC4Q03721 635 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 TLDC1Q6P9B6 456 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 C16orf59Q7L2K0 433 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 ASB15Q8WXK1 588 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 TAS2R10Q9NYW0 307 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 SPATA31A1Q5TZJ5 1347 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 MOXD2PA6NHM9 499 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 ISM1B1AKI9 464 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 RBMXL2O75526 392 aaKnown RBP8.04□□□□□ -1.12
APOB-201ENST00000233242 CDRT1O95170 752 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 MT-ND5P03915 603 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 FNDC3BQ53EP0 1204 aaKnown RBP8.04□□□□□ -1.12
APOB-201ENST00000233242 TMPRSS11BQ86T26 416 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 OR10T2Q8NGX3 314 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 TBATAQ96M53 351 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 CYP2S1Q96SQ9 504 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 ZNF471Q9BX82 626 aaPredicted RBP8.04□□□□□ -1.12
APOB-201ENST00000233242 UNKLQ9H9P5 680 aaKnown RBP8.04□□□□□ -1.12
APOB-201ENST00000233242 CYTH4Q9UIA0 394 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 DGKGP49619 791 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 TCEAL3Q969E4 200 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 LGALS12Q96DT0 336 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 PRICKLE1Q96MT3 831 aaPredicted RBP8.04□□□□□ -1.12
APOB-201ENST00000233242 CCDC106Q9BWC9 280 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 TLE6Q9H808 572 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 MROH1Q8NDA8 1641 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 AGRPO00253 132 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 IL7RP16871 459 aa8.04□□□□□ -1.12
APOB-201ENST00000233242 PDHA2P29803 388 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 GDI2P50395 445 aaKnown RBP8.03□□□□□ -1.12
APOB-201ENST00000233242 GDPGP1Q6ZNW5 385 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 PDZD9Q8IXQ8 264 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 PIGKQ92643 395 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 DDX4Q9NQI0 724 aaKnown RBP8.03□□□□□ -1.12
APOB-201ENST00000233242 MOCS1Q9NZB8 636 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 DTLQ9NZJ0 730 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 DIP2BQ9P265 1576 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 NSG1P42857 185 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 NRIP1P48552 1158 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 PDE12Q6L8Q7 609 aaKnown RBP8.03□□□□□ -1.12
APOB-201ENST00000233242 ZNF486Q96H40 463 aaPredicted RBP8.03□□□□□ -1.12
APOB-201ENST00000233242 TM9SF2Q99805 663 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 NDUFAF4Q9P032 175 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 KIAA1522Q9P206 1035 aaPredicted RBP8.03□□□□□ -1.12
APOB-201ENST00000233242 WNT7AO00755 349 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 DNASE1P24855 282 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 PSMA6P60900 246 aaKnown RBP8.03□□□□□ -1.12
APOB-201ENST00000233242 EMX2Q04743 252 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 MEP1AQ16819 746 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 GXYLT1Q4G148 440 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 UBAP2Q5T6F2 1119 aaKnown RBP8.03□□□□□ -1.12
APOB-201ENST00000233242 SLC22A10Q63ZE4 541 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 ZNF227Q86WZ6 799 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 GHDCQ8N2G8 530 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 Q8N402 240 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 OR13J1Q8NGT2 312 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 NIFKQ9BYG3 293 aaKnown RBP8.03□□□□□ -1.12
APOB-201ENST00000233242 AMBNQ9NP70 447 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 PCDHB3Q9Y5E6 796 aa8.03□□□□□ -1.12
APOB-201ENST00000233242 ST14Q9Y5Y6 855 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms