RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 SMPD3Q9NY59 655 aaPredicted RBP12.95□□□□□ -0.34
COL1A1-201ENST00000225964 UTS2RQ9UKP6 389 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 PCDHB3Q9Y5E6 796 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 WNT6Q9Y6F9 365 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 ARHGEF28Q8N1W1 1705 aaKnown RBP12.95□□□□□ -0.34
COL1A1-201ENST00000225964 OR14I1A6ND48 311 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 KLF1Q13351 362 aaPredicted RBP12.95□□□□□ -0.34
COL1A1-201ENST00000225964 WDR45BQ5MNZ6 344 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 Q6ZVU0 165 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 RAB43Q86YS6 212 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 OXR1Q8N573 874 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 METTL27Q8N6F8 245 aaPredicted RBP12.95□□□□□ -0.34
COL1A1-201ENST00000225964 MAPK15Q8TD08 544 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 CLEC4DQ8WXI8 215 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 TFAP2BQ92481 460 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 PYCR2Q96C36 320 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 HAPLN3Q96S86 360 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 CCSER2Q9H7U1 834 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 FBXO9Q9UK97 447 aaPredicted RBP12.95□□□□□ -0.34
COL1A1-201ENST00000225964 GRXCR1A8MXD5 290 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 RPP14O95059 124 aaKnown RBP12.95□□□□□ -0.34
COL1A1-201ENST00000225964 PTX3P26022 381 aaPredicted RBP12.95□□□□□ -0.34
COL1A1-201ENST00000225964 KLHL22Q53GT1 634 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 PRPF38BQ5VTL8 546 aaKnown RBP12.95□□□□□ -0.34
COL1A1-201ENST00000225964 CNTN3Q9P232 1028 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 FAM237AA0A1B0GTK4 181 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 DUXAA6NLW8 204 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 CDC40O60508 579 aaKnown RBP eCLIP12.95□□□□□ -0.34
COL1A1-201ENST00000225964 ATP1B2P14415 290 aaPredicted RBP12.95□□□□□ -0.34
COL1A1-201ENST00000225964 HNRNPDQ14103 355 aaKnown RBP12.95□□□□□ -0.34
COL1A1-201ENST00000225964 CHRNA6Q15825 494 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 ZNF676Q8N7Q3 588 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 ZSCAN4Q8NAM6 433 aaPredicted RBP12.95□□□□□ -0.34
COL1A1-201ENST00000225964 KIAA1143Q96AT1 154 aaPredicted RBP12.95□□□□□ -0.34
COL1A1-201ENST00000225964 GORASP1Q9BQQ3 440 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 C12orf4Q9NQ89 552 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 LYARQ9NX58 379 aaKnown RBP12.95□□□□□ -0.34
COL1A1-201ENST00000225964 C19orf25Q9UFG5 118 aaPredicted RBP12.95□□□□□ -0.34
COL1A1-201ENST00000225964 FOXO6A8MYZ6 492 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 NPHS1O60500 1241 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 TACSTD2P09758 323 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 PRKCDQ05655 676 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 LRP8Q14114 963 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 QPCTQ16769 361 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 RASGEF1CQ8N431 466 aa12.95□□□□□ -0.34
COL1A1-201ENST00000225964 CCDC59Q9P031 241 aaKnown RBP12.95□□□□□ -0.34
COL1A1-201ENST00000225964 KDM4FA0A1W2PPD8 638 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 A0A1W2PQ45 241 aaPredicted RBP12.94□□□□□ -0.34
COL1A1-201ENST00000225964 A0A1W2PQY0 241 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 C2CD4BA6NLJ0 364 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 WNT7AO00755 349 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 SHOX2O60902 331 aaPredicted RBP12.94□□□□□ -0.34
COL1A1-201ENST00000225964 CSTBP04080 98 aaKnown RBP12.94□□□□□ -0.34
COL1A1-201ENST00000225964 AZGP1P25311 298 aaKnown RBP12.94□□□□□ -0.34
COL1A1-201ENST00000225964 XKP51811 444 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 SLC10A6Q3KNW5 377 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 CMTR2Q8IYT2 770 aaKnown RBP12.94□□□□□ -0.34
COL1A1-201ENST00000225964 YIPF7Q8N8F6 280 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 BCO2Q9BYV7 579 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 NMUR2Q9GZQ4 415 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 SMG9Q9H0W8 520 aaKnown RBP12.94□□□□□ -0.34
COL1A1-201ENST00000225964 ILVBLA1L0T0 632 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 ZNF16P17020 682 aaPredicted RBP12.94□□□□□ -0.34
COL1A1-201ENST00000225964 CSNK2A2P19784 350 aaPredicted RBP12.94□□□□□ -0.34
COL1A1-201ENST00000225964 ACSL1P33121 698 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 PRRT3Q5FWE3 981 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 DNM1P34Q6PK57 102 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 CNTD1Q8N815 330 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 PSKH2Q96QS6 385 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 TAS2R7Q9NYW3 318 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 SERTAD3Q9UJW9 196 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 PMF1-BGLAPU3KQ54 211 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 HLA-DQB2P05538 268 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 TYRP1P17643 537 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 C4orf46Q504U0 113 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 PITRM1Q5JRX3 1037 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 SH3PXD2AQ5TCZ1 1133 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 TXNDC8Q6A555 127 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 ADGRD1Q6QNK2 874 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 MR1Q95460 341 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 TOP1MTQ969P6 601 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 ENY2Q9NPA8 101 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 PPM1HQ9ULR3 514 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 CAPN8A6NHC0 703 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 E7EQ34 232 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 DSTNP60981 165 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 XIAPP98170 497 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 SIRPB2Q5JXA9 342 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 THOC7Q6I9Y2 204 aaKnown RBP12.94□□□□□ -0.34
COL1A1-201ENST00000225964 KLHL36Q8N4N3 616 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 OR52E4Q8NGH9 312 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 KCNC2Q96PR1 638 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 PARPBPQ9NWS1 579 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 AIREO43918 545 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 AKR1D1P51857 326 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 CSTF1Q05048 431 aaKnown RBP12.94□□□□□ -0.34
COL1A1-201ENST00000225964 ANO7Q6IWH7 933 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 ZNF662Q6ZS27 426 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 SDR16C5Q8N3Y7 309 aa12.94□□□□□ -0.34
COL1A1-201ENST00000225964 BPIFB1Q8TDL5 484 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms