RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 ZNF37AP17032 561 aaPredicted RBP12.2□□□□□ -0.46
LSM5-201ENST00000223084 CYP2A7P20853 494 aa12.2□□□□□ -0.46
LSM5-201ENST00000223084 IMPA1P29218 277 aa12.2□□□□□ -0.46
LSM5-201ENST00000223084 STX2P32856 288 aa12.2□□□□□ -0.46
LSM5-201ENST00000223084 RPA3P35244 121 aaPredicted RBP12.2□□□□□ -0.46
LSM5-201ENST00000223084 GP5P40197 560 aa12.2□□□□□ -0.46
LSM5-201ENST00000223084 TMPRSS3P57727 454 aa12.2□□□□□ -0.46
LSM5-201ENST00000223084 LRRC8EQ6NSJ5 796 aa12.2□□□□□ -0.46
LSM5-201ENST00000223084 CYB5D1Q6P9G0 228 aa12.2□□□□□ -0.46
LSM5-201ENST00000223084 BPHLQ86WA6 291 aaPredicted RBP12.2□□□□□ -0.46
LSM5-201ENST00000223084 SLC38A9Q8NBW4 561 aa12.2□□□□□ -0.46
LSM5-201ENST00000223084 OR2L3Q8NG85 312 aa12.2□□□□□ -0.46
LSM5-201ENST00000223084 OR8K5Q8NH50 307 aa12.2□□□□□ -0.46
LSM5-201ENST00000223084 MCOLN3Q8TDD5 553 aa12.2□□□□□ -0.46
LSM5-201ENST00000223084 ANKRD49Q8WVL7 239 aa12.2□□□□□ -0.46
LSM5-201ENST00000223084 SMPDL3AQ92484 453 aa12.2□□□□□ -0.46
LSM5-201ENST00000223084 N4BP2L2Q92802 583 aaPredicted RBP12.2□□□□□ -0.46
LSM5-201ENST00000223084 MRRFQ96E11 262 aaKnown RBP12.2□□□□□ -0.46
LSM5-201ENST00000223084 FMO2Q99518 471 aa12.2□□□□□ -0.46
LSM5-201ENST00000223084 RBBP8Q99708 897 aa12.2□□□□□ -0.46
LSM5-201ENST00000223084 SLC12A9Q9BXP2 914 aa12.2□□□□□ -0.46
LSM5-201ENST00000223084 FAM129AQ9BZQ8 928 aa12.2□□□□□ -0.46
LSM5-201ENST00000223084 UNKQ9C0B0 810 aaKnown RBP12.2□□□□□ -0.46
LSM5-201ENST00000223084 SPRTNQ9H040 489 aaPredicted RBP12.2□□□□□ -0.46
LSM5-201ENST00000223084 AKIRIN1Q9H9L7 192 aaPredicted RBP12.2□□□□□ -0.46
LSM5-201ENST00000223084 FANCEQ9HB96 536 aa12.2□□□□□ -0.46
LSM5-201ENST00000223084 PARVBQ9HBI1 364 aa12.2□□□□□ -0.46
LSM5-201ENST00000223084 TXNDC16Q9P2K2 825 aa12.2□□□□□ -0.46
LSM5-201ENST00000223084 TAC3Q9UHF0 121 aa12.2□□□□□ -0.46
LSM5-201ENST00000223084 E7ENX8 843 aa12.19□□□□□ -0.46
LSM5-201ENST00000223084 K7ENP7 123 aa12.19□□□□□ -0.46
LSM5-201ENST00000223084 CDC7O00311 574 aa12.19□□□□□ -0.46
LSM5-201ENST00000223084 PHGDHO43175 533 aaKnown RBP12.19□□□□□ -0.46
LSM5-201ENST00000223084 ACSL3O95573 720 aa12.19□□□□□ -0.46
LSM5-201ENST00000223084 MSL3P1P0C860 447 aa12.19□□□□□ -0.46
LSM5-201ENST00000223084 GMPRP36959 345 aa12.19□□□□□ -0.46
LSM5-201ENST00000223084 HSD17B2P37059 387 aa12.19□□□□□ -0.46
LSM5-201ENST00000223084 SLC12A2P55011 1212 aa12.19□□□□□ -0.46
LSM5-201ENST00000223084 UCNP55089 124 aa12.19□□□□□ -0.46
LSM5-201ENST00000223084 ITGA1P56199 1179 aa12.19□□□□□ -0.46
LSM5-201ENST00000223084 TAP2Q03519 686 aa12.19□□□□□ -0.46
LSM5-201ENST00000223084 VAC14Q08AM6 782 aa12.19□□□□□ -0.46
LSM5-201ENST00000223084 GPS2Q13227 327 aa12.19□□□□□ -0.46
LSM5-201ENST00000223084 SP140Q13342 867 aa12.19□□□□□ -0.46
LSM5-201ENST00000223084 USP10Q14694 798 aaKnown RBP12.19□□□□□ -0.46
LSM5-201ENST00000223084 ARHGAP19Q14CB8 494 aa12.19□□□□□ -0.46
LSM5-201ENST00000223084 FAM199XQ6PEV8 388 aaPredicted RBP12.19□□□□□ -0.46
LSM5-201ENST00000223084 INO80CQ6PI98 192 aaPredicted RBP12.19□□□□□ -0.46
LSM5-201ENST00000223084 LRRC56Q8IYG6 542 aaPredicted RBP12.19□□□□□ -0.46
LSM5-201ENST00000223084 SPATA6LQ8N4H0 392 aa12.19□□□□□ -0.46
LSM5-201ENST00000223084 ESX1Q8N693 406 aa12.19□□□□□ -0.46
LSM5-201ENST00000223084 FCRL4Q96PJ5 515 aa12.19□□□□□ -0.46
LSM5-201ENST00000223084 GPR22Q99680 433 aa12.19□□□□□ -0.46
LSM5-201ENST00000223084 ATG10Q9H0Y0 220 aa12.19□□□□□ -0.46
LSM5-201ENST00000223084 CDC42EP4Q9H3Q1 356 aaKnown RBP12.19□□□□□ -0.46
LSM5-201ENST00000223084 L2HGDHQ9H9P8 463 aa12.19□□□□□ -0.46
LSM5-201ENST00000223084 SYTL2Q9HCH5 934 aa12.19□□□□□ -0.46
LSM5-201ENST00000223084 GPAMQ9HCL2 828 aa12.19□□□□□ -0.46
LSM5-201ENST00000223084 SLC6A20Q9NP91 592 aa12.19□□□□□ -0.46
LSM5-201ENST00000223084 INTS7Q9NVH2 962 aaKnown RBP12.19□□□□□ -0.46
LSM5-201ENST00000223084 STOX2Q9P2F5 926 aaPredicted RBP12.19□□□□□ -0.46
LSM5-201ENST00000223084 IL17BQ9UHF5 180 aa12.19□□□□□ -0.46
LSM5-201ENST00000223084 SERTAD3Q9UJW9 196 aa12.19□□□□□ -0.46
LSM5-201ENST00000223084 CROTQ9UKG9 612 aa12.19□□□□□ -0.46
LSM5-201ENST00000223084 NFU1Q9UMS0 254 aa12.19□□□□□ -0.46
LSM5-201ENST00000223084 MGAQ8IWI9 3026 aa12.19□□□□□ -0.46
LSM5-201ENST00000223084 FER1L5A0AVI2 2057 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 NPEPPSL1A6NEC2 478 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 E7EQ34 232 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 SLC16A5O15375 505 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 ZNF749O43361 778 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 CTSVO60911 334 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 CPNE3O75131 537 aaKnown RBP12.18□□□□□ -0.46
LSM5-201ENST00000223084 OR2B3O76000 313 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 F8A1P23610 371 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 CMPK1P30085 196 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 SPRP35270 261 aaPredicted RBP12.18□□□□□ -0.46
LSM5-201ENST00000223084 STAT5AP42229 794 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 CYP4F2P78329 520 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 POU4F1Q01851 419 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 ABHD18Q0P651 414 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 MAP7Q14244 749 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 TEX35Q5T0J7 233 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 GRTP1Q5TC63 336 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 LCN10Q6JVE6 187 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 GPR155Q7Z3F1 870 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 RELL1Q8IUW5 271 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 MCATQ8IVS2 390 aaKnown RBP12.18□□□□□ -0.46
LSM5-201ENST00000223084 IFT20Q8IY31 132 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 NKAPQ8N5F7 415 aaKnown RBP12.18□□□□□ -0.46
LSM5-201ENST00000223084 UHMK1Q8TAS1 419 aaKnown RBP12.18□□□□□ -0.46
LSM5-201ENST00000223084 ZUFSPQ96AP4 578 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 ALKBH8Q96BT7 664 aaKnown RBP12.18□□□□□ -0.46
LSM5-201ENST00000223084 PDLIM5Q96HC4 596 aaKnown RBP12.18□□□□□ -0.46
LSM5-201ENST00000223084 CCDC138Q96M89 665 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 RUFY1Q96T51 708 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 DPH7Q9BTV6 452 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 CHRNA10Q9GZZ6 450 aa12.18□□□□□ -0.46
LSM5-201ENST00000223084 GPN2Q9H9Y4 310 aaPredicted RBP12.18□□□□□ -0.46
LSM5-201ENST00000223084 MRPS30Q9NP92 439 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms