RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 CREB3L1Q96BA8 519 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 IL4I1Q96RQ9 567 aa14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 MRPS30Q9NP92 439 aaKnown RBP14.32□□□□□ -0.12
SPTLC2-201ENST00000216484 ZNF254O75437 659 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 IFNA5P01569 189 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 HTR2AP28223 471 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 SCNN1GP51170 649 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 LDB1Q86U70 411 aaPredicted RBP14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 ZNF578Q96N58 590 aaPredicted RBP14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 COQ10BQ9H8M1 238 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 C1RP00736 705 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 COL6A2P12110 1019 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 UBE2UQ5VVX9 321 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 ICKQ9UPZ9 632 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 ZNF705FA8MVS1 300 aaPredicted RBP14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 TLL1O43897 1013 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 STBD1O95210 358 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 ADH1AP07327 375 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 ZNF705DP0CH99 300 aaPredicted RBP14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 ZNF705BP0CI00 300 aaPredicted RBP14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 SLC39A4Q6P5W5 647 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 CRTC1Q6UUV9 634 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 ABHD13Q7L211 337 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 POLR2J3Q9H1A7 115 aaKnown RBP14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 RAB21Q9UL25 225 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 PCDHB11Q9Y5F2 797 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 CARNS1A5YM72 827 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 XPNPEP2O43895 674 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 PKMP14618 531 aaKnown RBP14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 KLF1Q13351 362 aaPredicted RBP14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 LIN52Q52LA3 116 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 SDHAF4Q5VUM1 108 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 ZNF282Q9UDV7 671 aaPredicted RBP14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 PCDHGC3Q9UN70 934 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 SMIM30A4D0T7 59 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 KHNYNO15037 678 aaKnown RBP14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 LILRB5O75023 590 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 RPP40O75818 363 aaKnown RBP14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 IFNA1P01562 189 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 TNFRSF8P28908 595 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 CLRN1P58418 232 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 DUS1LQ6P1R4 473 aaKnown RBP14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 RASGEF1CQ8N431 466 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 TIFAQ96CG3 184 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 IPPKQ9H8X2 491 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 MAN2C1Q9NTJ4 1040 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 WDR37Q9Y2I8 494 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 CHRFAM7AQ494W8 412 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 PLPP4Q5VZY2 271 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 PGM2L1Q6PCE3 622 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 PNPLA2Q96AD5 504 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 TMEM45AQ9NWC5 275 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 ADGRL3Q9HAR2 1447 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 CHD2O14647 1828 aaKnown RBP14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 ESPL1Q14674 2120 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 SH3PXD2BA1X283 911 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 TLR5O60602 858 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 PAGE1O75459 146 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 ERP29P30040 261 aaKnown RBP14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 HCAR3P49019 387 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 MTPNP58546 118 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 NKX6-1P78426 367 aaPredicted RBP14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 ERI1Q8IV48 349 aaKnown RBP14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 ARL14Q8N4G2 192 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 MTMR9Q96QG7 549 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 ALPK1Q96QP1 1244 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 ATG5Q9H1Y0 275 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 SRMSQ9H3Y6 488 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 HMX1Q9NP08 348 aaPredicted RBP14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 TAS2R14Q9NYV8 317 aa14.31□□□□□ -0.12
SPTLC2-201ENST00000216484 ASGR1P07306 291 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 TAS2R50P59544 299 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 C12orf45Q8N5I9 185 aaPredicted RBP14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 AGAP2Q99490 1192 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 TMEM246Q9BRR3 403 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 DCSTAMPQ9H295 470 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 BCAS3Q9H6U6 928 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 GBA2Q9HCG7 927 aaPredicted RBP14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 PDHXO00330 501 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 ACKR2O00590 384 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 BEX3Q00994 111 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 PCBP2Q15366 365 aaKnown RBP eCLIP14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 KCTD19Q17RG1 926 aaPredicted RBP14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 PM20D2Q8IYS1 436 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 TOR1AIP2Q8NFQ8 470 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 STYXQ8WUJ0 223 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 SLC30A2Q9BRI3 323 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 ZNF701Q9NV72 531 aaPredicted RBP14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 TAL1P17542 331 aaPredicted RBP14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 ZNF45Q02386 682 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 KLF10Q13118 480 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 ISCA1Q9BUE6 129 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 FANCFQ9NPI8 374 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 PTTG2Q9NZH5 202 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 A0A1W2PPM1 405 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 M0QX08 132 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 M0R2N6 131 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 CYP11A1P05108 521 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 PON3Q15166 354 aa14.3□□□□□ -0.12
SPTLC2-201ENST00000216484 MARCH9Q86YJ5 346 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms