RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 NOL6Q9H6R4 1146 aaKnown RBP10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 PDE7BQ9NP56 450 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 PLAGL1Q9UM63 463 aa10.1□□□□□ -0.79
NIPAL3-201ENST00000003912 TIAM2Q8IVF5 1701 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 C2orf71A6NGG8 1288 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 FADS2P1A8MWK0 482 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 GRXCR1A8MXD5 290 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 ZBTB42B2RXF5 422 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 ARCN1P48444 511 aaKnown RBP10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 MTX3Q5HYI7 312 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 HTR3DQ70Z44 454 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 AMIGO2Q86SJ2 522 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 SCD5Q86SK9 330 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 OXR1Q8N573 874 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 KCT2Q8NC54 265 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 SIGLEC10Q96LC7 697 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 SPATA7Q9P0W8 599 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 PTGFRNQ9P2B2 879 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 RAPGEFL1Q9UHV5 662 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 MKL2Q9ULH7 1088 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 FOXO6A8MYZ6 492 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 STX16-NPEPL1H3BU86 382 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 STX16O14662 325 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 BCL10O95999 233 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 GRK6P43250 576 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 PTPRCAPQ14761 206 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 RPTNQ6XPR3 784 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 SPPL2CQ8IUH8 684 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 C3orf58Q8NDZ4 430 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 LENG8Q96PV6 779 aaPredicted RBP10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 KLF16Q9BXK1 252 aaPredicted RBP10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 KLHL25Q9H0H3 589 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 HDHD2Q9H0R4 259 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 KCNH6Q9H252 994 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 STMN3Q9NZ72 180 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 MOCS1Q9NZB8 636 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 LOC730098B7Z3J9 87 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 K7ERQ8 282 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 SRCP12931 536 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 SLC7A9P82251 487 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 HMGCS1Q01581 520 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 MPP7Q5T2T1 576 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 GLIS1Q8NBF1 620 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 RPLP0P6Q8NHW5 317 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 CD244Q9BZW8 370 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 CCNB1IP1Q9NPC3 277 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 SDHAF3Q9NRP4 125 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 ZNF358Q9NW07 568 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 LYARQ9NX58 379 aaKnown RBP10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 GALPQ9UBC7 116 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 UTS2RQ9UKP6 389 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 A0A1B0GW55 424 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 RIIAD1A6NNX1 92 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 MANBAO00462 879 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 DUX4L2P0CJ85 424 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 DUX4L3P0CJ86 424 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 DUX4L4P0CJ87 422 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 DUX4L5P0CJ88 424 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 DUX4L6P0CJ89 424 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 DUX4L7P0CJ90 424 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 ANPEPP15144 967 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 NUDT1P36639 197 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 PCYT1AP49585 367 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 NAIF1Q69YI7 327 aaPredicted RBP10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 GALNT7Q86SF2 657 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 C7orf57Q8NEG2 295 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 MR1Q95460 341 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 TRIB3Q96RU7 358 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 IL1RAPQ9NPH3 570 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 DUX4Q9UBX2 424 aa10.09□□□□□ -0.79
NIPAL3-201ENST00000003912 NRAPQ86VF7 1730 aa10.08□□□□□ -0.8
NIPAL3-201ENST00000003912 FAM170BA6NMN3 283 aa10.08□□□□□ -0.8
NIPAL3-201ENST00000003912 UGT2B11O75310 529 aa10.08□□□□□ -0.8
NIPAL3-201ENST00000003912 APBB3O95704 486 aa10.08□□□□□ -0.8
NIPAL3-201ENST00000003912 CHRNGP07510 517 aa10.08□□□□□ -0.8
NIPAL3-201ENST00000003912 NR2F6P10588 404 aa10.08□□□□□ -0.8
NIPAL3-201ENST00000003912 CHRM1P11229 460 aaPredicted RBP10.08□□□□□ -0.8
NIPAL3-201ENST00000003912 ARSAP15289 507 aa10.08□□□□□ -0.8
NIPAL3-201ENST00000003912 CXCL12P48061 93 aa10.08□□□□□ -0.8
NIPAL3-201ENST00000003912 CACNA2D1P54289 1103 aa10.08□□□□□ -0.8
NIPAL3-201ENST00000003912 ABATP80404 500 aa10.08□□□□□ -0.8
NIPAL3-201ENST00000003912 COX10Q12887 443 aa10.08□□□□□ -0.8
NIPAL3-201ENST00000003912 C1orf61Q13536 156 aa10.08□□□□□ -0.8
NIPAL3-201ENST00000003912 TGFBIQ15582 683 aa10.08□□□□□ -0.8
NIPAL3-201ENST00000003912 IFI44LQ53G44 452 aa10.08□□□□□ -0.8
NIPAL3-201ENST00000003912 BROXQ5VW32 411 aa10.08□□□□□ -0.8
NIPAL3-201ENST00000003912 KLHL24Q6TFL4 600 aa10.08□□□□□ -0.8
NIPAL3-201ENST00000003912 OR8H2Q8N162 312 aa10.08□□□□□ -0.8
NIPAL3-201ENST00000003912 OR10A6Q8NH74 314 aa10.08□□□□□ -0.8
NIPAL3-201ENST00000003912 SLC24A3Q9HC58 644 aa10.08□□□□□ -0.8
NIPAL3-201ENST00000003912 PDP1Q9P0J1 537 aaPredicted RBP10.08□□□□□ -0.8
NIPAL3-201ENST00000003912 IFT80Q9P2H3 777 aaPredicted RBP10.08□□□□□ -0.8
NIPAL3-201ENST00000003912 B4GALT2O60909 372 aa10.08□□□□□ -0.8
NIPAL3-201ENST00000003912 MED26O95402 600 aa10.08□□□□□ -0.8
NIPAL3-201ENST00000003912 SEC24AO95486 1093 aa10.08□□□□□ -0.8
NIPAL3-201ENST00000003912 EFNA1P20827 205 aaPredicted RBP10.08□□□□□ -0.8
NIPAL3-201ENST00000003912 HNRNPA2B1P22626 353 aaKnown RBP10.08□□□□□ -0.8
NIPAL3-201ENST00000003912 CCR10P46092 362 aa10.08□□□□□ -0.8
NIPAL3-201ENST00000003912 RAPSNQ13702 412 aa10.08□□□□□ -0.8
NIPAL3-201ENST00000003912 DSC3Q14574 896 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms