RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 ASTE1Q2TB18 679 aaPredicted RBP14.05□□□□□ -0.16
PNKP-218ENST00000625299 MTFR2Q6P444 385 aa14.05□□□□□ -0.16
PNKP-218ENST00000625299 RPTNQ6XPR3 784 aa14.05□□□□□ -0.16
PNKP-218ENST00000625299 NLRP9Q7RTR0 991 aa14.05□□□□□ -0.16
PNKP-218ENST00000625299 TMTC1Q8IUR5 882 aa14.05□□□□□ -0.16
PNKP-218ENST00000625299 KBTBD2Q8IY47 623 aa14.05□□□□□ -0.16
PNKP-218ENST00000625299 PIANPQ8IYJ0 282 aa14.05□□□□□ -0.16
PNKP-218ENST00000625299 BRIX1Q8TDN6 353 aaKnown RBP14.05□□□□□ -0.16
PNKP-218ENST00000625299 SELENOSQ9BQE4 189 aa14.05□□□□□ -0.16
PNKP-218ENST00000625299 FERMT1Q9BQL6 677 aa14.05□□□□□ -0.16
PNKP-218ENST00000625299 GOLPH3Q9H4A6 298 aa14.05□□□□□ -0.16
PNKP-218ENST00000625299 IFNKQ9P0W0 207 aa14.05□□□□□ -0.16
PNKP-218ENST00000625299 IMPACTQ9P2X3 320 aa14.05□□□□□ -0.16
PNKP-218ENST00000625299 SEC14L3Q9UDX4 400 aa14.05□□□□□ -0.16
PNKP-218ENST00000625299 NSG1A0A0A6YYJ2 146 aa14.04□□□□□ -0.16
PNKP-218ENST00000625299 BHMG1C9JSJ3 638 aaPredicted RBP14.04□□□□□ -0.16
PNKP-218ENST00000625299 USP1O94782 785 aa14.04□□□□□ -0.16
PNKP-218ENST00000625299 NSG1P42857 185 aa14.04□□□□□ -0.16
PNKP-218ENST00000625299 CA7P43166 264 aa14.04□□□□□ -0.16
PNKP-218ENST00000625299 MARCKSL1P49006 195 aa14.04□□□□□ -0.16
PNKP-218ENST00000625299 CARSP49589 748 aaKnown RBP14.04□□□□□ -0.16
PNKP-218ENST00000625299 RAB28P51157 221 aa14.04□□□□□ -0.16
PNKP-218ENST00000625299 OCA2Q04671 838 aa14.04□□□□□ -0.16
PNKP-218ENST00000625299 EEF1A2Q05639 463 aaKnown RBP14.04□□□□□ -0.16
PNKP-218ENST00000625299 CACNG1Q06432 222 aa14.04□□□□□ -0.16
PNKP-218ENST00000625299 ZC3H12BQ5HYM0 836 aaKnown RBP14.04□□□□□ -0.16
PNKP-218ENST00000625299 TCTE1Q5JU00 501 aa14.04□□□□□ -0.16
PNKP-218ENST00000625299 ANKRD20A2Q5SQ80 823 aa14.04□□□□□ -0.16
PNKP-218ENST00000625299 ANKRD20A1Q5TYW2 823 aa14.04□□□□□ -0.16
PNKP-218ENST00000625299 ANKRD20A3Q5VUR7 823 aa14.04□□□□□ -0.16
PNKP-218ENST00000625299 YOD1Q5VVQ6 348 aaPredicted RBP14.04□□□□□ -0.16
PNKP-218ENST00000625299 CFAP61Q8NHU2 1237 aa14.04□□□□□ -0.16
PNKP-218ENST00000625299 MIEF2Q96C03 454 aa14.04□□□□□ -0.16
PNKP-218ENST00000625299 IL17FQ96PD4 163 aa14.04□□□□□ -0.16
PNKP-218ENST00000625299 INTS7Q9NVH2 962 aaKnown RBP14.04□□□□□ -0.16
PNKP-218ENST00000625299 ZNHIT6Q9NWK9 470 aaKnown RBP14.04□□□□□ -0.16
PNKP-218ENST00000625299 C3orf18Q9UK00 162 aa14.04□□□□□ -0.16
PNKP-218ENST00000625299 SLC5A10A0PJK1 596 aa14.03□□□□□ -0.16
PNKP-218ENST00000625299 VSTM2BA6NLU5 285 aa14.03□□□□□ -0.16
PNKP-218ENST00000625299 KCNN4O15554 427 aa14.03□□□□□ -0.16
PNKP-218ENST00000625299 STK10O94804 968 aaKnown RBP14.03□□□□□ -0.16
PNKP-218ENST00000625299 ZRANB2O95218 330 aaKnown RBP eCLIP14.03□□□□□ -0.16
PNKP-218ENST00000625299 RASAL1O95294 804 aa14.03□□□□□ -0.16
PNKP-218ENST00000625299 ONECUT2O95948 504 aa14.03□□□□□ -0.16
PNKP-218ENST00000625299 PRR35P0CG20 571 aa14.03□□□□□ -0.16
PNKP-218ENST00000625299 TPH1P17752 444 aa14.03□□□□□ -0.16
PNKP-218ENST00000625299 MST1P26927 711 aa14.03□□□□□ -0.16
PNKP-218ENST00000625299 CASP6P55212 293 aa14.03□□□□□ -0.16
PNKP-218ENST00000625299 VSX2P58304 361 aaPredicted RBP14.03□□□□□ -0.16
PNKP-218ENST00000625299 RBPJQ06330 500 aa14.03□□□□□ -0.16
PNKP-218ENST00000625299 SF1Q15637 639 aaKnown RBP14.03□□□□□ -0.16
PNKP-218ENST00000625299 DENND5AQ6IQ26 1287 aa14.03□□□□□ -0.16
PNKP-218ENST00000625299 CAVIN1Q6NZI2 390 aaKnown RBP14.03□□□□□ -0.16
PNKP-218ENST00000625299 CNSTQ6PJW8 725 aa14.03□□□□□ -0.16
PNKP-218ENST00000625299 LINC01555Q8NAE3 123 aa14.03□□□□□ -0.16
PNKP-218ENST00000625299 STT3BQ8TCJ2 826 aa14.03□□□□□ -0.16
PNKP-218ENST00000625299 SLC22A18Q96BI1 424 aa14.03□□□□□ -0.16
PNKP-218ENST00000625299 LRRC45Q96CN5 670 aa14.03□□□□□ -0.16
PNKP-218ENST00000625299 CCDC42Q96M95 316 aa14.03□□□□□ -0.16
PNKP-218ENST00000625299 FAM118BQ9BPY3 351 aa14.03□□□□□ -0.16
PNKP-218ENST00000625299 ZNF304Q9HCX3 659 aa14.03□□□□□ -0.16
PNKP-218ENST00000625299 NLE1Q9NVX2 485 aaPredicted RBP14.03□□□□□ -0.16
PNKP-218ENST00000625299 PIH1D1Q9NWS0 290 aaKnown RBP14.03□□□□□ -0.16
PNKP-218ENST00000625299 MRPS2Q9Y399 296 aaKnown RBP14.03□□□□□ -0.16
PNKP-218ENST00000625299 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.03□□□□□ -0.163e-9■□□□□ 10.7
PNKP-218ENST00000625299 OR51F1A6NGY5 319 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 GOLGA6L19H0YKK7 550 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 H7C0S8 307 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 APOC4-APOC2K7ER74 178 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 QSOX1O00391 747 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 S1PR4O95977 384 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 CRYABP02511 175 aaKnown RBP14.02□□□□□ -0.17
PNKP-218ENST00000625299 APOC2P02655 101 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 EIF2S1P05198 315 aaKnown RBP14.02□□□□□ -0.17
PNKP-218ENST00000625299 CELA2AP08217 269 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 ZGLP1P0C6A0 271 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 ESRRAP11474 423 aaPredicted RBP14.02□□□□□ -0.17
PNKP-218ENST00000625299 COX6A1P12074 109 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 CD9P21926 228 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 CTNNA2P26232 953 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 SOX11P35716 441 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 PMP22Q01453 160 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 POU6F1Q14863 301 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 FAM214AQ32MH5 1076 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 WASHC2DQ5SRD0 308 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 FAAH2Q6GMR7 532 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 FIGLAQ6QHK4 219 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 BBS12Q6ZW61 710 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 NDUFAF7Q7L592 441 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 CDKL3Q8IVW4 592 aaPredicted RBP14.02□□□□□ -0.17
PNKP-218ENST00000625299 KATNAL2Q8IYT4 538 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 RCOR2Q8IZ40 523 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 ZNF295-AS1Q8N0V1 137 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 OR8K1Q8NGG5 319 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 SUN3Q8TAQ9 357 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 PSMF1Q92530 271 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 CDKN2AIPNLQ96HQ2 116 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 ALS2CR12Q96Q35 445 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 CHP1Q99653 195 aa14.02□□□□□ -0.17
PNKP-218ENST00000625299 C19orf43Q9BQ61 176 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms