RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 TIAL1Q01085 375 aaKnown RBP eCLIP15.29■□□□□ 0.04
CPSF1-213ENST00000620219 PNCKQ6P2M8 343 aa15.29■□□□□ 0.04
CPSF1-213ENST00000620219 TMEM145Q8NBT3 493 aa15.29■□□□□ 0.04
CPSF1-213ENST00000620219 SLC12A9Q9BXP2 914 aa15.29■□□□□ 0.04
CPSF1-213ENST00000620219 OR51B5Q9H339 312 aa15.29■□□□□ 0.04
CPSF1-213ENST00000620219 MBNL1Q9NR56 388 aaKnown RBP15.29■□□□□ 0.04
CPSF1-213ENST00000620219 ANXA4P09525 319 aaPredicted RBP15.29■□□□□ 0.04
CPSF1-213ENST00000620219 ALOX15P16050 662 aaPredicted RBP15.29■□□□□ 0.04
CPSF1-213ENST00000620219 CDK3Q00526 305 aa15.29■□□□□ 0.04
CPSF1-213ENST00000620219 IRF4Q15306 451 aa15.29■□□□□ 0.04
CPSF1-213ENST00000620219 LRRC23Q53EV4 343 aaPredicted RBP15.29■□□□□ 0.04
CPSF1-213ENST00000620219 PRR23CQ6ZRP0 262 aa15.29■□□□□ 0.04
CPSF1-213ENST00000620219 Q7L0L9 218 aa15.29■□□□□ 0.04
CPSF1-213ENST00000620219 OOSP2Q86WS3 158 aa15.29■□□□□ 0.04
CPSF1-213ENST00000620219 OR9A1PQ8NGU1 263 aa15.29■□□□□ 0.04
CPSF1-213ENST00000620219 MEAF6Q9HAF1 191 aa15.29■□□□□ 0.04
CPSF1-213ENST00000620219 PLA2G16P53816 162 aa15.29■□□□□ 0.04
CPSF1-213ENST00000620219 CASP9P55211 416 aa15.29■□□□□ 0.04
CPSF1-213ENST00000620219 DDHD1Q8NEL9 900 aa15.29■□□□□ 0.04
CPSF1-213ENST00000620219 OR4E2Q8NGC2 313 aa15.29■□□□□ 0.04
CPSF1-213ENST00000620219 DLG3Q92796 817 aa15.29■□□□□ 0.04
CPSF1-213ENST00000620219 LMAN1LQ9HAT1 526 aa15.29■□□□□ 0.04
CPSF1-213ENST00000620219 TBPL1P62380 186 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 PLOD1Q02809 727 aaPredicted RBP15.28■□□□□ 0.04
CPSF1-213ENST00000620219 GSTA3Q16772 222 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 PRAMEF13Q5VWM6 474 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 FAM129CQ86XR2 697 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 PELI3Q8N2H9 469 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 PANX1Q96RD7 426 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 PKP4Q99569 1192 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 EBF2Q9HAK2 575 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 GMPR2Q9P2T1 348 aaKnown RBP15.28■□□□□ 0.04
CPSF1-213ENST00000620219 KLHL3Q9UH77 587 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 MRPS17Q9Y2R5 130 aaKnown RBP15.28■□□□□ 0.04
CPSF1-213ENST00000620219 E2F3O00716 465 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 PI15O43692 258 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 KCNH1O95259 989 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 ZNF682O95780 498 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 PDYNP01213 254 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 ALDOCP09972 364 aaKnown RBP15.28■□□□□ 0.04
CPSF1-213ENST00000620219 EBLN1P0CF75 366 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 DRD1P21728 446 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 MTPNP58546 118 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 CCDC157Q569K6 752 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 TMEM196Q5HYL7 178 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 SLC2A7Q6PXP3 512 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 LRRC70Q7Z2Q7 622 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 HORMAD1Q86X24 394 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 SLC22A15Q8IZD6 547 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 FRMD1Q8N878 549 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 GULP1Q9UBP9 304 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 PCDHGA11Q9Y5H2 935 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 EME2A4GXA9 379 aaPredicted RBP15.28■□□□□ 0.04
CPSF1-213ENST00000620219 H7BY64 318 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 PSMD11O00231 422 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 NARSO43776 548 aaKnown RBP15.28■□□□□ 0.04
CPSF1-213ENST00000620219 VIPP01282 170 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 FCHO2Q0JRZ9 810 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 AMIGO2Q86SJ2 522 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 KBTBD6Q86V97 674 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 PGAM4Q8N0Y7 254 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 ASB11Q8WXH4 323 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 PRAP1Q96NZ9 151 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 RUBCNLQ9H714 662 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 CLEC1BQ9P126 229 aa15.28■□□□□ 0.04
CPSF1-213ENST00000620219 FKBP6O75344 327 aa15.27■□□□□ 0.04
CPSF1-213ENST00000620219 TSPAN12O95859 305 aa15.27■□□□□ 0.04
CPSF1-213ENST00000620219 CPOXP36551 454 aa15.27■□□□□ 0.04
CPSF1-213ENST00000620219 CEACAM7Q14002 265 aa15.27■□□□□ 0.04
CPSF1-213ENST00000620219 DOC2AQ14183 400 aa15.27■□□□□ 0.04
CPSF1-213ENST00000620219 RFTN2Q52LD8 501 aaPredicted RBP15.27■□□□□ 0.04
CPSF1-213ENST00000620219 FAM20CQ8IXL6 584 aa15.27■□□□□ 0.04
CPSF1-213ENST00000620219 C1orf52Q8N6N3 182 aaKnown RBP15.27■□□□□ 0.04
CPSF1-213ENST00000620219 C8orf33Q9H7E9 229 aaPredicted RBP15.27■□□□□ 0.04
CPSF1-213ENST00000620219 UBE2ZQ9H832 354 aaPredicted RBP15.27■□□□□ 0.04
CPSF1-213ENST00000620219 E7EQ34 232 aa15.27■□□□□ 0.04
CPSF1-213ENST00000620219 H0Y8X5 98 aa15.27■□□□□ 0.04
CPSF1-213ENST00000620219 TRIM38O00635 465 aa15.27■□□□□ 0.04
CPSF1-213ENST00000620219 GAPDHSO14556 408 aaPredicted RBP15.27■□□□□ 0.04
CPSF1-213ENST00000620219 ENO2P09104 434 aaPredicted RBP15.27■□□□□ 0.04
CPSF1-213ENST00000620219 CDH1P12830 882 aa15.27■□□□□ 0.04
CPSF1-213ENST00000620219 NCK1P16333 377 aa15.27■□□□□ 0.04
CPSF1-213ENST00000620219 AMD1P17707 334 aa15.27■□□□□ 0.04
CPSF1-213ENST00000620219 AK4P27144 223 aaPredicted RBP15.27■□□□□ 0.04
CPSF1-213ENST00000620219 PRIM2P49643 509 aa15.27■□□□□ 0.04
CPSF1-213ENST00000620219 SUOXP51687 545 aa15.27■□□□□ 0.04
CPSF1-213ENST00000620219 ADARP55265 1226 aaKnown RBP15.27■□□□□ 0.04
CPSF1-213ENST00000620219 RPS14P62263 151 aaKnown RBP15.27■□□□□ 0.04
CPSF1-213ENST00000620219 ANKRD26P1Q6NSI1 321 aa15.27■□□□□ 0.04
CPSF1-213ENST00000620219 AADATQ8N5Z0 425 aa15.27■□□□□ 0.04
CPSF1-213ENST00000620219 RNF217Q8TC41 542 aa15.27■□□□□ 0.04
CPSF1-213ENST00000620219 TMEM74Q96NL1 305 aa15.27■□□□□ 0.04
CPSF1-213ENST00000620219 LGR4Q9BXB1 951 aa15.27■□□□□ 0.04
CPSF1-213ENST00000620219 S100A14Q9HCY8 104 aa15.27■□□□□ 0.04
CPSF1-213ENST00000620219 STX18Q9P2W9 335 aaKnown RBP15.27■□□□□ 0.04
CPSF1-213ENST00000620219 RFXANKO14593 260 aa15.27■□□□□ 0.03
CPSF1-213ENST00000620219 VEGFDO43915 354 aa15.27■□□□□ 0.03
CPSF1-213ENST00000620219 PEX2P28328 305 aa15.27■□□□□ 0.03
CPSF1-213ENST00000620219 ACSL1P33121 698 aa15.27■□□□□ 0.03
CPSF1-213ENST00000620219 CHI3L1P36222 383 aaPredicted RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms