RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 SPATS1Q496A3 300 aa9.52□□□□□ -0.89
TNFRSF9-204ENST00000615230 TMPRSS11AQ6ZMR5 421 aa9.52□□□□□ -0.89
TNFRSF9-204ENST00000615230 TBC1D21Q8IYX1 336 aa9.52□□□□□ -0.89
TNFRSF9-204ENST00000615230 VPS29Q9UBQ0 182 aa9.52□□□□□ -0.89
TNFRSF9-204ENST00000615230 TAC3Q9UHF0 121 aa9.52□□□□□ -0.89
TNFRSF9-204ENST00000615230 LGALS13Q9UHV8 139 aa9.52□□□□□ -0.89
TNFRSF9-204ENST00000615230 GJE1A6NN92 205 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 MAGEB17A8MXT2 336 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 FAM25AB3EWG3 89 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 FAM25CB3EWG5 89 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 FAM25GB3EWG6 89 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 J3KR12 359 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 EBLN1P0CF75 366 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 FOLR3P41439 243 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 NFKB2Q00653 900 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 MRPL49Q13405 166 aaKnown RBP9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 LRIF1Q5T3J3 769 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 PM20D1Q6GTS8 502 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 ZCCHC23Q6ZST2 131 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 DPPA4Q7L190 304 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 DHRSXQ8N5I4 330 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 OR4C15Q8NGM1 316 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 MAFAQ8NHW3 353 aaPredicted RBP9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 GPR151Q8TDV0 419 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 ZMAT2Q96NC0 199 aaKnown RBP9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 CDRT15Q96T59 188 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 UBE2ZQ9H832 354 aaPredicted RBP9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 PELI2Q9HAT8 420 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 EQTNQ9NQ60 294 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 PRTFDC1Q9NRG1 225 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 PHIPQ8WWQ0 1821 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 BCORQ6W2J9 1755 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 ELOA3DA6NLF2 546 aaPredicted RBP9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 A8MU76 341 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 TRIM24O15164 1050 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 TIPRLO75663 272 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 AK1P00568 194 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 IMPDH1P20839 514 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 MYL9P24844 172 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 PSPHP78330 225 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 ELOA3BQ3SY89 546 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 HFE2Q6ZVN8 426 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 CXXC5Q7LFL8 322 aaKnown RBP9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 ATCAYQ86WG3 371 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 DENND6BQ8NEG7 585 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 ELOA3Q8NG57 546 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 SEC14L1Q92503 715 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 KCNJ9Q92806 393 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 TWNKQ96RR1 684 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 FUT8Q9BYC5 575 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 ABCG8Q9H221 673 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 LYVE1Q9Y5Y7 322 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 TULP3O75386 442 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 FABP3P05413 133 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 MYCLP1P12525 358 aaPredicted RBP9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 RPS14P62263 151 aaKnown RBP9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 CLDN10P78369 228 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 MRPS35P82673 323 aaKnown RBP9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 RCN1Q15293 331 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 TAF5Q15542 800 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 TRABD2AQ86V40 505 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 CADM2Q8N3J6 435 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 CNTD1Q8N815 330 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 LGR4Q9BXB1 951 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 ASPNQ9BXN1 380 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 ALKBH4Q9NXW9 302 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 ADAMDEC1O15204 470 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 RFPL2O75678 378 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 S1PR4O95977 384 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 CD48P09326 243 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 ZNF33BQ06732 778 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 SOX4Q06945 474 aaPredicted RBP9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 CYP4F3Q08477 520 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 COX10Q12887 443 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 DSC3Q14574 896 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 HEATR4Q86WZ0 1026 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 OR2T12Q8NG77 320 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 KIFC1Q9BW19 673 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 BCAS3Q9H6U6 928 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 IFT80Q9P2H3 777 aaPredicted RBP9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 NFKBIL1Q9UBC1 381 aaPredicted RBP9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 IKZF3Q9UKT9 509 aa9.51□□□□□ -0.89
TNFRSF9-204ENST00000615230 LINC01553A4QN01 128 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 RNF225M0QZC1 329 aaPredicted RBP9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 PTGESO14684 152 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 ERI3O43414 337 aaKnown RBP9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 KLHL18O94889 574 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 KCNK5O95279 499 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 ABCG1P45844 678 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 ARL14Q8N4G2 192 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 SLC13A3Q8WWT9 602 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 RFKQ969G6 155 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 ZDHHC5Q9C0B5 715 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 PIF1Q9H611 641 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 TBC1D23Q9NUY8 699 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 PCDH10Q9P2E7 1040 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 KCNK6Q9Y257 313 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 TTC34A8MYJ7 566 aa9.5□□□□□ -0.89
TNFRSF9-204ENST00000615230 NBNO60934 754 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms