RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 VPS26AO75436 327 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 PIAS1O75925 651 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 TSPAN12O95859 305 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 C1QAP02745 245 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 ENO3P13929 434 aaPredicted RBP10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 SSTR1P30872 391 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 RORAP35398 523 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 SLC7A5Q01650 507 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 RHDQ02161 417 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 CKAP4Q07065 602 aaKnown RBP10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 MGAT5Q09328 741 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 CALCOCO2Q13137 446 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 GPS2Q13227 327 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 FCRL6Q6DN72 434 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 LCN10Q6JVE6 187 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 FAM199XQ6PEV8 388 aaPredicted RBP10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 TTC23LQ6PF05 361 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 PAQR3Q6TCH7 311 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 ZNF517Q6ZMY9 492 aaPredicted RBP10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 TMEM126BQ8IUX1 230 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 DNAJC22Q8N4W6 341 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 FBXO15Q8NCQ5 510 aaPredicted RBP10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 OR2A1Q8NGT9 310 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 OR9A1PQ8NGU1 263 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 FBXO25Q8TCJ0 367 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 CT55Q8WUE5 264 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 EEF1AKMT1Q8WVE0 214 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 DLG3Q92796 817 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 SLC45A3Q96JT2 553 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 PKP4Q99569 1192 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 OLFM1Q99784 485 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 MCMBPQ9BTE3 642 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 LRRC1Q9BTT6 524 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 RAB11FIP5Q9BXF6 653 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 GPN2Q9H9Y4 310 aaPredicted RBP10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 SYTL2Q9HCH5 934 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 SAYSD1Q9NPB0 183 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 LHX9Q9NQ69 397 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 SPATA7Q9P0W8 599 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 CROTQ9UKG9 612 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 ADAMTS6Q9UKP5 1117 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 PCDHB3Q9Y5E6 796 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 MRFAP1Q9Y605 127 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 SPENQ96T58 3664 aaKnown RBP10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 CXorf49A8MYA2 514 aaPredicted RBP10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 ERVH48-1M5A8F1 160 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 EIF3FO00303 357 aaPredicted RBP10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 EIF3HO15372 352 aaKnown RBP eCLIP10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 NKX2-8O15522 239 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 CPNE3O75131 537 aaKnown RBP10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 SLC16A8O95907 504 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 CATP04040 527 aaKnown RBP10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 CBSLP0DN79 551 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 FDXRP22570 491 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 OAS2P29728 719 aaKnown RBP10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 CBSP35520 551 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 DLSTP36957 453 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 GRIA3P42263 894 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 SKIV2L2P42285 1042 aaKnown RBP10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 PLTPP55058 493 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 ITGA1P56199 1179 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 GPX6P59796 221 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 COL9A2Q14055 689 aaPredicted RBP10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 WHAMMP3Q1A5X7 153 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 LINC00303Q3SY05 128 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 ZNF385CQ66K41 422 aaPredicted RBP10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 CAPN12Q6ZSI9 719 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 ZC3HC1Q86WB0 502 aaKnown RBP10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 LRRC56Q8IYG6 542 aaPredicted RBP10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 NOA1Q8NC60 698 aaKnown RBP10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 OR2L3Q8NG85 312 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 GABPB2Q8TAK5 448 aaPredicted RBP10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 MAGEC3Q8TD91 643 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 ZNF480Q8WV37 535 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 STARD8Q92502 1023 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 SEC14L1Q92503 715 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 ZNF592Q92610 1267 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 KIAA1143Q96AT1 154 aaPredicted RBP10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 SLC22A18Q96BI1 424 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 LRFN5Q96NI6 719 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 MIPEPQ99797 713 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 SPRTNQ9H040 489 aaPredicted RBP10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 RAB17Q9H0T7 212 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 FANCEQ9HB96 536 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 FAM114A2Q9NRY5 505 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 ZDHHC18Q9NUE0 388 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 PCMTD2Q9NV79 361 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 TAS2R13Q9NYV9 303 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 ZFATQ9P243 1243 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 TRMT6Q9UJA5 497 aaKnown RBP10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 PADI1Q9ULC6 663 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 UTP11Q9Y3A2 253 aaKnown RBP10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 KLK4Q9Y5K2 254 aa10.57□□□□□ -0.72
SHKBP1-206ENST00000595523 ZNF891A8MT65 544 aaPredicted RBP10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 ZNF749O43361 778 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 CTSVO60911 334 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 MT-ND3P03897 115 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 CAPN1P07384 714 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 CYP2A7P20853 494 aa10.56□□□□□ -0.72
SHKBP1-206ENST00000595523 IMPA1P29218 277 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms