RNA–Protein interactions for RNA: ENST00000594243.1

UPF1-202, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-202ENST00000594243 HIST1H2AHQ96KK5 128 aa14.5□□□□□ -0.09
UPF1-202ENST00000594243 PKP4Q99569 1192 aa14.5□□□□□ -0.09
UPF1-202ENST00000594243 RBBP8Q99708 897 aa14.5□□□□□ -0.09
UPF1-202ENST00000594243 HIST1H2AJQ99878 128 aa14.5□□□□□ -0.09
UPF1-202ENST00000594243 MCMBPQ9BTE3 642 aa14.5□□□□□ -0.09
UPF1-202ENST00000594243 H2AFJQ9BTM1 129 aa14.5□□□□□ -0.09
UPF1-202ENST00000594243 SLC12A9Q9BXP2 914 aa14.5□□□□□ -0.09
UPF1-202ENST00000594243 ULBP3Q9BZM4 244 aa14.5□□□□□ -0.09
UPF1-202ENST00000594243 CHRNA10Q9GZZ6 450 aa14.5□□□□□ -0.09
UPF1-202ENST00000594243 L2HGDHQ9H9P8 463 aa14.5□□□□□ -0.09
UPF1-202ENST00000594243 PARVBQ9HBI1 364 aa14.5□□□□□ -0.09
UPF1-202ENST00000594243 POPDC3Q9HBV1 291 aa14.5□□□□□ -0.09
UPF1-202ENST00000594243 WDR70Q9NW82 654 aa14.5□□□□□ -0.09
UPF1-202ENST00000594243 SERTAD3Q9UJW9 196 aa14.5□□□□□ -0.09
UPF1-202ENST00000594243 RALYQ9UKM9 306 aaKnown RBP14.5□□□□□ -0.09
UPF1-202ENST00000594243 SSUH2Q9Y2M2 353 aa14.5□□□□□ -0.09
UPF1-202ENST00000594243 PABPN1LA6NDY0 278 aaKnown RBP14.49□□□□□ -0.09
UPF1-202ENST00000594243 PRICKLE3O43900 615 aaPredicted RBP14.49□□□□□ -0.09
UPF1-202ENST00000594243 ZNF500O60304 480 aaPredicted RBP14.49□□□□□ -0.09
UPF1-202ENST00000594243 RAD1O60671 282 aa14.49□□□□□ -0.09
UPF1-202ENST00000594243 PIAS1O75925 651 aa14.49□□□□□ -0.09
UPF1-202ENST00000594243 C1QAP02745 245 aa14.49□□□□□ -0.09
UPF1-202ENST00000594243 MT-ND3P03897 115 aa14.49□□□□□ -0.09
UPF1-202ENST00000594243 ERGP11308 486 aa14.49□□□□□ -0.09
UPF1-202ENST00000594243 PNLIPRP1P54315 467 aa14.49□□□□□ -0.09
UPF1-202ENST00000594243 MAP7Q14244 749 aa14.49□□□□□ -0.09
UPF1-202ENST00000594243 TGIF1Q15583 401 aa14.49□□□□□ -0.09
UPF1-202ENST00000594243 GPR19Q15760 415 aa14.49□□□□□ -0.09
UPF1-202ENST00000594243 KIF26BQ2KJY2 2108 aa14.49□□□□□ -0.09
UPF1-202ENST00000594243 TRIM73Q86UV7 250 aa14.49□□□□□ -0.09
UPF1-202ENST00000594243 TAX1BP1Q86VP1 789 aa14.49□□□□□ -0.09
UPF1-202ENST00000594243 IL22RA1Q8N6P7 574 aa14.49□□□□□ -0.09
UPF1-202ENST00000594243 PPM1NQ8N819 430 aa14.49□□□□□ -0.09
UPF1-202ENST00000594243 C19orf47Q8N9M1 422 aaKnown RBP14.49□□□□□ -0.09
UPF1-202ENST00000594243 LMNTD1Q8N9Z9 388 aa14.49□□□□□ -0.09
UPF1-202ENST00000594243 SMPDL3AQ92484 453 aa14.49□□□□□ -0.09
UPF1-202ENST00000594243 ANKRD7Q92527 254 aa14.49□□□□□ -0.09
UPF1-202ENST00000594243 NKD1Q969G9 470 aa14.49□□□□□ -0.09
UPF1-202ENST00000594243 ZUFSPQ96AP4 578 aa14.49□□□□□ -0.09
UPF1-202ENST00000594243 TSPAN17Q96FV3 270 aa14.49□□□□□ -0.09
UPF1-202ENST00000594243 CCDC138Q96M89 665 aa14.49□□□□□ -0.09
UPF1-202ENST00000594243 CCNL2Q96S94 520 aaPredicted RBP14.49□□□□□ -0.09
UPF1-202ENST00000594243 TRIM54Q9BYV2 358 aa14.49□□□□□ -0.09
UPF1-202ENST00000594243 KLHL25Q9H0H3 589 aa14.49□□□□□ -0.09
UPF1-202ENST00000594243 MTO1Q9Y2Z2 717 aaKnown RBP14.49□□□□□ -0.09
UPF1-202ENST00000594243 TARM1B6A8C7 271 aa14.48□□□□□ -0.09
UPF1-202ENST00000594243 SLC16A8O95907 504 aa14.48□□□□□ -0.09
UPF1-202ENST00000594243 RHOXF2BP0C7M4 288 aa14.48□□□□□ -0.09
UPF1-202ENST00000594243 CCNYL3P0C7X3 344 aa14.48□□□□□ -0.09
UPF1-202ENST00000594243 ZNF37AP17032 561 aaPredicted RBP14.48□□□□□ -0.09
UPF1-202ENST00000594243 RPA3P35244 121 aaPredicted RBP14.48□□□□□ -0.09
UPF1-202ENST00000594243 TMPRSS3P57727 454 aa14.48□□□□□ -0.09
UPF1-202ENST00000594243 TAS2R39P59534 338 aa14.48□□□□□ -0.09
UPF1-202ENST00000594243 FASTKQ14296 549 aaKnown RBP14.48□□□□□ -0.09
UPF1-202ENST00000594243 USP10Q14694 798 aaKnown RBP14.48□□□□□ -0.09
UPF1-202ENST00000594243 SLMAPQ14BN4 828 aa14.48□□□□□ -0.09
UPF1-202ENST00000594243 NAA25Q14CX7 972 aa14.48□□□□□ -0.09
UPF1-202ENST00000594243 MANEAQ5SRI9 462 aa14.48□□□□□ -0.09
UPF1-202ENST00000594243 PWWP2BQ6NUJ5 590 aa14.48□□□□□ -0.09
UPF1-202ENST00000594243 C19orf48Q6RUI8 117 aa14.48□□□□□ -0.09
UPF1-202ENST00000594243 C6orf15Q6UXA7 325 aaPredicted RBP14.48□□□□□ -0.09
UPF1-202ENST00000594243 CDHR3Q6ZTQ4 885 aa14.48□□□□□ -0.09
UPF1-202ENST00000594243 SPNS2Q8IVW8 549 aa14.48□□□□□ -0.09
UPF1-202ENST00000594243 SYTL1Q8IYJ3 562 aa14.48□□□□□ -0.09
UPF1-202ENST00000594243 CACNA2D3Q8IZS8 1091 aa14.48□□□□□ -0.09
UPF1-202ENST00000594243 ESX1Q8N693 406 aa14.48□□□□□ -0.09
UPF1-202ENST00000594243 OR2A1Q8NGT9 310 aa14.48□□□□□ -0.09
UPF1-202ENST00000594243 ZNF480Q8WV37 535 aa14.48□□□□□ -0.09
UPF1-202ENST00000594243 CYTH2Q99418 400 aa14.48□□□□□ -0.09
UPF1-202ENST00000594243 GPR22Q99680 433 aa14.48□□□□□ -0.09
UPF1-202ENST00000594243 RHOXF2Q9BQY4 288 aa14.48□□□□□ -0.09
UPF1-202ENST00000594243 GPAMQ9HCL2 828 aa14.48□□□□□ -0.09
UPF1-202ENST00000594243 NINJ2Q9NZG7 142 aa14.48□□□□□ -0.09
UPF1-202ENST00000594243 ADAMTS6Q9UKP5 1117 aa14.48□□□□□ -0.09
UPF1-202ENST00000594243 PDE10AQ9Y233 779 aa14.48□□□□□ -0.09
UPF1-202ENST00000594243 KRT87PA6NCN2 255 aa14.47□□□□□ -0.09
UPF1-202ENST00000594243 TMEM150CB9EJG8 249 aa14.47□□□□□ -0.09
UPF1-202ENST00000594243 E7ENX8 843 aa14.47□□□□□ -0.09
UPF1-202ENST00000594243 SCRG1O75711 98 aa14.47□□□□□ -0.09
UPF1-202ENST00000594243 KIAA0754O94854 1291 aa14.47□□□□□ -0.09
UPF1-202ENST00000594243 TSPAN12O95859 305 aa14.47□□□□□ -0.09
UPF1-202ENST00000594243 DLGAP3O95886 979 aa14.47□□□□□ -0.09
UPF1-202ENST00000594243 ENO2P09104 434 aaPredicted RBP14.47□□□□□ -0.09
UPF1-202ENST00000594243 STMN1P16949 149 aa14.47□□□□□ -0.09
UPF1-202ENST00000594243 ZNF28P17035 718 aa14.47□□□□□ -0.09
UPF1-202ENST00000594243 MAGP20916 626 aa14.47□□□□□ -0.09
UPF1-202ENST00000594243 ECHS1P30084 290 aa14.47□□□□□ -0.09
UPF1-202ENST00000594243 CMPK1P30085 196 aa14.47□□□□□ -0.09
UPF1-202ENST00000594243 TAP2Q03519 686 aa14.47□□□□□ -0.09
UPF1-202ENST00000594243 ABHD18Q0P651 414 aa14.47□□□□□ -0.09
UPF1-202ENST00000594243 ZC3H12BQ5HYM0 836 aaKnown RBP14.47□□□□□ -0.09
UPF1-202ENST00000594243 FIGLAQ6QHK4 219 aa14.47□□□□□ -0.09
UPF1-202ENST00000594243 SUSD1Q6UWL2 747 aa14.47□□□□□ -0.09
UPF1-202ENST00000594243 TMEM207Q6UWW9 146 aa14.47□□□□□ -0.09
UPF1-202ENST00000594243 CCDC81Q6ZN84 652 aa14.47□□□□□ -0.09
UPF1-202ENST00000594243 TMEM126BQ8IUX1 230 aa14.47□□□□□ -0.09
UPF1-202ENST00000594243 CEP97Q8IW35 865 aa14.47□□□□□ -0.09
UPF1-202ENST00000594243 GPR135Q8IZ08 494 aa14.47□□□□□ -0.09
UPF1-202ENST00000594243 OR2L3Q8NG85 312 aa14.47□□□□□ -0.09
UPF1-202ENST00000594243 DLG3Q92796 817 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms