RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 KLHL41O60662 606 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 SLCO2B1O94956 709 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 GAS8O95995 478 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 GOT2P00505 430 aaKnown RBP10.01□□□□□ -0.81
VPS4B-207ENST00000591519 ZSCAN5DPP0CG00 497 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 CCR7P32248 378 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 FDFT1P37268 417 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 KCNJ1P48048 391 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 RAB28P51157 221 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 GNG11P61952 73 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 BRD3Q15059 726 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 SIX1Q15475 284 aaPredicted RBP10.01□□□□□ -0.81
VPS4B-207ENST00000591519 OASLQ15646 514 aaKnown RBP10.01□□□□□ -0.81
VPS4B-207ENST00000591519 KYNUQ16719 465 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 PLEKHN1Q494U1 663 aaPredicted RBP10.01□□□□□ -0.81
VPS4B-207ENST00000591519 NKAIN1Q4KMZ8 207 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 CCDC38Q502W7 563 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 CRB2Q5IJ48 1285 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 DCAF10Q5QP82 559 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 TSTD2Q5T7W7 516 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 VWA5B1Q5TIE3 1220 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 MLIPQ5VWP3 458 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 ZNF534Q76KX8 674 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 NLRP9Q7RTR0 991 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 GSTA5Q7RTV2 222 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 MRGPREQ86SM8 312 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 TRIM73Q86UV7 250 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 SLC22A15Q8IZD6 547 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 DNAAF3Q8N9W5 541 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 OR4L1Q8NH43 312 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 COG1Q8WTW3 980 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 ASZ1Q8WWH4 475 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 N4BP2L2Q92802 583 aaPredicted RBP10.01□□□□□ -0.81
VPS4B-207ENST00000591519 CARD6Q9BX69 1037 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 SLAMF7Q9NQ25 335 aa10.01□□□□□ -0.81
VPS4B-207ENST00000591519 TDRKHQ9Y2W6 561 aaKnown RBP10.01□□□□□ -0.81
VPS4B-207ENST00000591519 SPTAN1Q13813 2472 aaKnown RBP10.01□□□□□ -0.81
VPS4B-207ENST00000591519 CCDC78A2IDD5 438 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 WIPF3A6NGB9 483 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 ISM1B1AKI9 464 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 PEX12O00623 359 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 CNOT3O75175 753 aaKnown RBP10□□□□□ -0.81
VPS4B-207ENST00000591519 AGFG2O95081 481 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 ALBP02768 609 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 CTSBP07858 339 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 CD9P21926 228 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 PEBP1P30086 187 aaKnown RBP10□□□□□ -0.81
VPS4B-207ENST00000591519 OTX2P32243 289 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 PPARGP37231 505 aaPredicted RBP10□□□□□ -0.81
VPS4B-207ENST00000591519 GRB7Q14451 532 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 MYBPC3Q14896 1274 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 C4orf17Q53FE4 359 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 AFTPHQ6ULP2 937 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 NAPRTQ6XQN6 538 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 ZNF655Q8N720 491 aaPredicted RBP10□□□□□ -0.81
VPS4B-207ENST00000591519 CCDC89Q8N998 374 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 LINC01555Q8NAE3 123 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 DENND1AQ8TEH3 1009 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 SSC4DQ8WTU2 575 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 MAIP1Q8WWC4 291 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 SLC22A18Q96BI1 424 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 PBKQ96KB5 322 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 ZNF778Q96MU6 729 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 OSBPL9Q96SU4 736 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 BARD1Q99728 777 aaKnown RBP10□□□□□ -0.81
VPS4B-207ENST00000591519 NDC1Q9BTX1 674 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 ZNF552Q9H707 407 aaPredicted RBP10□□□□□ -0.81
VPS4B-207ENST00000591519 CASS4Q9NQ75 786 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 SLC22A11Q9NSA0 550 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 P4HTMQ9NXG6 502 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 PGPEP1Q9NXJ5 209 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 EURLQ9NYK6 297 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 IFT80Q9P2H3 777 aaPredicted RBP10□□□□□ -0.81
VPS4B-207ENST00000591519 DHCR7Q9UBM7 475 aaKnown RBP10□□□□□ -0.81
VPS4B-207ENST00000591519 SLC2A6Q9UGQ3 507 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 GPN3Q9UHW5 284 aaPredicted RBP10□□□□□ -0.81
VPS4B-207ENST00000591519 B3GNT3Q9Y2A9 372 aa10□□□□□ -0.81
VPS4B-207ENST00000591519 PTRH2Q9Y3E5 179 aaKnown RBP10□□□□□ -0.81
VPS4B-207ENST00000591519 SNRNP200O75643 2136 aaKnown RBP10□□□□□ -0.81
VPS4B-207ENST00000591519 PRRC2CQ9Y520 2896 aaKnown RBP9.99□□□□□ -0.81
VPS4B-207ENST00000591519 TARM1B6A8C7 271 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 E7EVH7 732 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 PRICKLE3O43900 615 aaPredicted RBP9.99□□□□□ -0.81
VPS4B-207ENST00000591519 SEMA7AO75326 666 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 IPO13O94829 963 aaKnown RBP9.99□□□□□ -0.81
VPS4B-207ENST00000591519 FKBP9O95302 570 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 DDAH2O95865 285 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 RPN2P04844 631 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 ALPPP05187 535 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 UMODP07911 640 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 PIM1P11309 404 aaPredicted RBP9.99□□□□□ -0.81
VPS4B-207ENST00000591519 AOAHP28039 575 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 PKLRP30613 574 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 FOLR3P41439 243 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 GRIA1P42261 906 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 VPS41P49754 854 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 GSK3AP49840 483 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 ARSFP54793 590 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 HSPA14Q0VDF9 509 aa9.99□□□□□ -0.81
VPS4B-207ENST00000591519 SEMA3AQ14563 771 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms