RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 PRDX3P30048 256 aaKnown RBP18.33■□□□□ 0.53
CLPTM1-209ENST00000588855 HSD17B2P37059 387 aa18.33■□□□□ 0.53
CLPTM1-209ENST00000588855 KCNC1P48547 511 aa18.33■□□□□ 0.53
CLPTM1-209ENST00000588855 KIR2DS3Q14952 304 aa18.33■□□□□ 0.53
CLPTM1-209ENST00000588855 KRT71Q3SY84 523 aa18.33■□□□□ 0.53
CLPTM1-209ENST00000588855 SPESP1Q6UW49 350 aa18.33■□□□□ 0.53
CLPTM1-209ENST00000588855 SUSD1Q6UWL2 747 aa18.33■□□□□ 0.53
CLPTM1-209ENST00000588855 TRIM73Q86UV7 250 aa18.33■□□□□ 0.53
CLPTM1-209ENST00000588855 GPSM1Q86YR5 675 aa18.33■□□□□ 0.53
CLPTM1-209ENST00000588855 LRRC56Q8IYG6 542 aaPredicted RBP18.33■□□□□ 0.53
CLPTM1-209ENST00000588855 EXT2Q93063 718 aa18.33■□□□□ 0.53
CLPTM1-209ENST00000588855 RNF112Q9ULX5 631 aa18.33■□□□□ 0.53
CLPTM1-209ENST00000588855 WASF3Q9UPY6 502 aa18.33■□□□□ 0.53
CLPTM1-209ENST00000588855 WDFY3Q8IZQ1 3526 aa18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 AKAP13Q12802 2813 aa18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 TLCD2A6NGC4 264 aa18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 NCF1BA6NI72 391 aaPredicted RBP18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 NCF1CA8MVU1 366 aaPredicted RBP18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 E7ENX8 843 aa18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 PRICKLE3O43900 615 aaPredicted RBP18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 RASSF9O75901 435 aa18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 COL6A2P12110 1019 aa18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 NCF1P14598 390 aaPredicted RBP18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 SPINK2P20155 84 aa18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 LSSP48449 732 aa18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 TAP2Q03519 686 aa18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 TSTA3Q13630 321 aaPredicted RBP18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 C16orf72Q14CZ0 275 aa18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 TGFBIQ15582 683 aa18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 ZXDCQ2QGD7 858 aaPredicted RBP18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 CACHD1Q5VU97 1274 aa18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 KLC3Q6P597 504 aa18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 AGTRAPQ6RW13 159 aa18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 PRSS42Q7Z5A4 293 aa18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 FAM20CQ8IXL6 584 aa18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 CACTIN-AS1Q8N1I8 211 aa18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 STAG3L4Q8TBR4 150 aa18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 ACMSDQ8TDX5 336 aa18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 SMPDL3AQ92484 453 aa18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 FBXL8Q96CD0 374 aa18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 ATOH8Q96SQ7 321 aa18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 CD180Q99467 661 aa18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 ATG10Q9H0Y0 220 aa18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 ARGLU1Q9NWB6 273 aaPredicted RBP18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 KLK13Q9UKR3 277 aa18.33■□□□□ 0.52
CLPTM1-209ENST00000588855 IGHV5-51A0A0C4DH38 117 aa18.32■□□□□ 0.52
CLPTM1-209ENST00000588855 ZNF839A8K0R7 811 aa18.32■□□□□ 0.52
CLPTM1-209ENST00000588855 KERAO60938 352 aa18.32■□□□□ 0.52
CLPTM1-209ENST00000588855 ADRB1P08588 477 aa18.32■□□□□ 0.52
CLPTM1-209ENST00000588855 CDH3P22223 829 aa18.32■□□□□ 0.52
CLPTM1-209ENST00000588855 OAS2P29728 719 aaKnown RBP18.32■□□□□ 0.52
CLPTM1-209ENST00000588855 TBPL1P62380 186 aa18.32■□□□□ 0.52
CLPTM1-209ENST00000588855 CDKL1Q00532 357 aa18.32■□□□□ 0.52
CLPTM1-209ENST00000588855 TRA2AQ13595 282 aaKnown RBP eCLIP18.32■□□□□ 0.52
CLPTM1-209ENST00000588855 ACAP2Q15057 778 aa18.32■□□□□ 0.52
CLPTM1-209ENST00000588855 TSNAXIP1Q2TAA8 658 aa18.32■□□□□ 0.52
CLPTM1-209ENST00000588855 TECRLQ5HYJ1 363 aa18.32■□□□□ 0.52
CLPTM1-209ENST00000588855 CEP85LQ5SZL2 805 aa18.32■□□□□ 0.52
CLPTM1-209ENST00000588855 ARHGAP22Q7Z5H3 698 aa18.32■□□□□ 0.52
CLPTM1-209ENST00000588855 EGFL8Q99944 293 aa18.32■□□□□ 0.52
CLPTM1-209ENST00000588855 ABCF3Q9NUQ8 709 aa18.32■□□□□ 0.52
CLPTM1-209ENST00000588855 TMX2-CTNND1H3BSU7 103 aa18.31■□□□□ 0.52
CLPTM1-209ENST00000588855 ANXA5P08758 320 aa18.31■□□□□ 0.52
CLPTM1-209ENST00000588855 ANKRD34CP0C6C1 535 aa18.31■□□□□ 0.52
CLPTM1-209ENST00000588855 PVRP15151 417 aa18.31■□□□□ 0.52
CLPTM1-209ENST00000588855 SEPHS1P49903 392 aa18.31■□□□□ 0.52
CLPTM1-209ENST00000588855 NAE1Q13564 534 aa18.31■□□□□ 0.52
CLPTM1-209ENST00000588855 CASP8Q14790 479 aa18.31■□□□□ 0.52
CLPTM1-209ENST00000588855 LRIG3Q6UXM1 1119 aa18.31■□□□□ 0.52
CLPTM1-209ENST00000588855 SH2D5Q6ZV89 423 aa18.31■□□□□ 0.52
CLPTM1-209ENST00000588855 OR2A1Q8NGT9 310 aa18.31■□□□□ 0.52
CLPTM1-209ENST00000588855 RHEBL1Q8TAI7 183 aa18.31■□□□□ 0.52
CLPTM1-209ENST00000588855 ATL1Q8WXF7 558 aa18.31■□□□□ 0.52
CLPTM1-209ENST00000588855 SLC22A18Q96BI1 424 aa18.31■□□□□ 0.52
CLPTM1-209ENST00000588855 MED8Q96G25 268 aa18.31■□□□□ 0.52
CLPTM1-209ENST00000588855 LIN37Q96GY3 246 aaPredicted RBP18.31■□□□□ 0.52
CLPTM1-209ENST00000588855 SCYL1Q96KG9 808 aa18.31■□□□□ 0.52
CLPTM1-209ENST00000588855 TSNARE1Q96NA8 513 aa18.31■□□□□ 0.52
CLPTM1-209ENST00000588855 ACAT2Q9BWD1 397 aa18.31■□□□□ 0.52
CLPTM1-209ENST00000588855 PITPNM3Q9BZ71 974 aa18.31■□□□□ 0.52
CLPTM1-209ENST00000588855 STRADBQ9C0K7 418 aa18.31■□□□□ 0.52
CLPTM1-209ENST00000588855 KLHL25Q9H0H3 589 aa18.31■□□□□ 0.52
CLPTM1-209ENST00000588855 ZNF768Q9H5H4 540 aaKnown RBP18.31■□□□□ 0.52
CLPTM1-209ENST00000588855 C1GALT1Q9NS00 363 aa18.31■□□□□ 0.52
CLPTM1-209ENST00000588855 XPR1Q9UBH6 696 aa18.31■□□□□ 0.52
CLPTM1-209ENST00000588855 SUPT3HB4E1H0 165 aa18.3■□□□□ 0.52
CLPTM1-209ENST00000588855 UBXN8O00124 270 aa18.3■□□□□ 0.52
CLPTM1-209ENST00000588855 TOX3O15405 576 aaPredicted RBP18.3■□□□□ 0.52
CLPTM1-209ENST00000588855 SUPT3HO75486 399 aa18.3■□□□□ 0.52
CLPTM1-209ENST00000588855 ST6GAL1P15907 406 aa18.3■□□□□ 0.52
CLPTM1-209ENST00000588855 RPA3P35244 121 aaPredicted RBP18.3■□□□□ 0.52
CLPTM1-209ENST00000588855 SLC5A12Q1EHB4 618 aa18.3■□□□□ 0.52
CLPTM1-209ENST00000588855 C18orf21Q32NC0 220 aaPredicted RBP18.3■□□□□ 0.52
CLPTM1-209ENST00000588855 TRABD2AQ86V40 505 aa18.3■□□□□ 0.52
CLPTM1-209ENST00000588855 C4orf33Q8N1A6 199 aa18.3■□□□□ 0.52
CLPTM1-209ENST00000588855 ALKBH8Q96BT7 664 aaKnown RBP18.3■□□□□ 0.52
CLPTM1-209ENST00000588855 PYCR2Q96C36 320 aa18.3■□□□□ 0.52
CLPTM1-209ENST00000588855 RHBDF1Q96CC6 855 aa18.3■□□□□ 0.52
CLPTM1-209ENST00000588855 MIPEPQ99797 713 aa18.3■□□□□ 0.52
CLPTM1-209ENST00000588855 SCNM1Q9BWG6 230 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms