RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 NRP2O60462 931 aa13.76□□□□□ -0.21
VMP1-206ENST00000587945 NIPSNAP2O75323 286 aa13.76□□□□□ -0.21
VMP1-206ENST00000587945 AVILO75366 819 aa13.76□□□□□ -0.21
VMP1-206ENST00000587945 RPS3P23396 243 aaKnown RBP eCLIP13.76□□□□□ -0.214e-6■■■■□ 22.6
VMP1-206ENST00000587945 VPS41P49754 854 aa13.76□□□□□ -0.21
VMP1-206ENST00000587945 DCAF10Q5QP82 559 aa13.76□□□□□ -0.21
VMP1-206ENST00000587945 VWA5B1Q5TIE3 1220 aa13.76□□□□□ -0.21
VMP1-206ENST00000587945 LRRC8BQ6P9F7 803 aa13.76□□□□□ -0.21
VMP1-206ENST00000587945 TTC23LQ6PF05 361 aa13.76□□□□□ -0.21
VMP1-206ENST00000587945 CNSTQ6PJW8 725 aa13.76□□□□□ -0.21
VMP1-206ENST00000587945 SPNS2Q8IVW8 549 aa13.76□□□□□ -0.21
VMP1-206ENST00000587945 DTWD1Q8N5C7 304 aa13.76□□□□□ -0.21
VMP1-206ENST00000587945 METTL27Q8N6F8 245 aaPredicted RBP13.76□□□□□ -0.21
VMP1-206ENST00000587945 PRELID2Q8N945 189 aa13.76□□□□□ -0.21
VMP1-206ENST00000587945 GALNT11Q8NCW6 608 aa13.76□□□□□ -0.21
VMP1-206ENST00000587945 DENND1AQ8TEH3 1009 aa13.76□□□□□ -0.21
VMP1-206ENST00000587945 PTERQ96BW5 349 aa13.76□□□□□ -0.21
VMP1-206ENST00000587945 FER1L6-AS2Q96M78 137 aa13.76□□□□□ -0.21
VMP1-206ENST00000587945 BIRC8Q96P09 236 aa13.76□□□□□ -0.21
VMP1-206ENST00000587945 IP6K3Q96PC2 410 aa13.76□□□□□ -0.21
VMP1-206ENST00000587945 TRIM56Q9BRZ2 755 aaKnown RBP13.76□□□□□ -0.21
VMP1-206ENST00000587945 KIFC1Q9BW19 673 aa13.76□□□□□ -0.21
VMP1-206ENST00000587945 INTS7Q9NVH2 962 aaKnown RBP13.76□□□□□ -0.21
VMP1-206ENST00000587945 MAP10Q9P2G4 905 aa13.76□□□□□ -0.21
VMP1-206ENST00000587945 GALPQ9UBC7 116 aa13.76□□□□□ -0.21
VMP1-206ENST00000587945 ZKSCAN5Q9Y2L8 839 aa13.76□□□□□ -0.21
VMP1-206ENST00000587945 LRRK2Q5S007 2527 aa13.76□□□□□ -0.21
VMP1-206ENST00000587945 SEC16AO15027 2179 aa13.76□□□□□ -0.21
VMP1-206ENST00000587945 TNRC6AQ8NDV7 1962 aaKnown RBP13.76□□□□□ -0.21
VMP1-206ENST00000587945 A0A1B0GX78 115 aa13.75□□□□□ -0.21
VMP1-206ENST00000587945 CTSVO60911 334 aa13.75□□□□□ -0.21
VMP1-206ENST00000587945 ALOX12BO75342 701 aa13.75□□□□□ -0.21
VMP1-206ENST00000587945 F7P08709 466 aaPredicted RBP13.75□□□□□ -0.21
VMP1-206ENST00000587945 CCDC175P0C221 793 aa13.75□□□□□ -0.21
VMP1-206ENST00000587945 YBX1P67809 324 aaKnown RBP13.75□□□□□ -0.21
VMP1-206ENST00000587945 FASTKQ14296 549 aaKnown RBP13.75□□□□□ -0.21
VMP1-206ENST00000587945 PLEKHN1Q494U1 663 aaPredicted RBP13.75□□□□□ -0.21
VMP1-206ENST00000587945 C4orf22Q6V702 233 aa13.75□□□□□ -0.21
VMP1-206ENST00000587945 ZNF662Q6ZS27 426 aa13.75□□□□□ -0.21
VMP1-206ENST00000587945 SHISA6Q6ZSJ9 500 aa13.75□□□□□ -0.21
VMP1-206ENST00000587945 COX15Q7KZN9 410 aa13.75□□□□□ -0.21
VMP1-206ENST00000587945 OVCH1Q7RTY7 1134 aa13.75□□□□□ -0.21
VMP1-206ENST00000587945 LRRC6Q86X45 466 aa13.75□□□□□ -0.21
VMP1-206ENST00000587945 MPP5Q8N3R9 675 aa13.75□□□□□ -0.21
VMP1-206ENST00000587945 GALNT16Q8N428 558 aa13.75□□□□□ -0.21
VMP1-206ENST00000587945 CLEC1AQ8NC01 280 aa13.75□□□□□ -0.21
VMP1-206ENST00000587945 MAIP1Q8WWC4 291 aa13.75□□□□□ -0.21
VMP1-206ENST00000587945 LPGAT1Q92604 370 aa13.75□□□□□ -0.21
VMP1-206ENST00000587945 DLG3Q92796 817 aa13.75□□□□□ -0.21
VMP1-206ENST00000587945 PNPLA2Q96AD5 504 aa13.75□□□□□ -0.21
VMP1-206ENST00000587945 RAD51AP1Q96B01 352 aa13.75□□□□□ -0.21
VMP1-206ENST00000587945 C19orf60Q96EN9 201 aa13.75□□□□□ -0.21
VMP1-206ENST00000587945 PSMG3-AS1Q96PY0 264 aa13.75□□□□□ -0.21
VMP1-206ENST00000587945 MIPEPQ99797 713 aa13.75□□□□□ -0.21
VMP1-206ENST00000587945 SELENOSQ9BQE4 189 aa13.75□□□□□ -0.21
VMP1-206ENST00000587945 MRM3Q9HC36 420 aaKnown RBP13.75□□□□□ -0.21
VMP1-206ENST00000587945 CUTCQ9NTM9 273 aa13.75□□□□□ -0.21
VMP1-206ENST00000587945 IL1RAPL1Q9NZN1 696 aa13.75□□□□□ -0.21
VMP1-206ENST00000587945 STOX2Q9P2F5 926 aaPredicted RBP13.75□□□□□ -0.21
VMP1-206ENST00000587945 SOX13Q9UN79 622 aa13.75□□□□□ -0.21
VMP1-206ENST00000587945 CRYL1Q9Y2S2 319 aa13.75□□□□□ -0.21
VMP1-206ENST00000587945 AP3B1O00203 1094 aa13.74□□□□□ -0.21
VMP1-206ENST00000587945 DSCR3O14972 297 aa13.74□□□□□ -0.21
VMP1-206ENST00000587945 KPNA5O15131 536 aa13.74□□□□□ -0.21
VMP1-206ENST00000587945 MED26O95402 600 aa13.74□□□□□ -0.21
VMP1-206ENST00000587945 CD63P08962 238 aa13.74□□□□□ -0.21
VMP1-206ENST00000587945 GP1BBP13224 206 aa13.74□□□□□ -0.21
VMP1-206ENST00000587945 TPSB2P20231 275 aa13.74□□□□□ -0.21
VMP1-206ENST00000587945 OR1D4P47884 311 aa13.74□□□□□ -0.21
VMP1-206ENST00000587945 ARSFP54793 590 aa13.74□□□□□ -0.21
VMP1-206ENST00000587945 VSX2P58304 361 aaPredicted RBP13.74□□□□□ -0.21
VMP1-206ENST00000587945 MRPL49Q13405 166 aaKnown RBP13.74□□□□□ -0.21
VMP1-206ENST00000587945 GRM7Q14831 915 aa13.74□□□□□ -0.21
VMP1-206ENST00000587945 MYBPC3Q14896 1274 aa13.74□□□□□ -0.21
VMP1-206ENST00000587945 TPSAB1Q15661 275 aa13.74□□□□□ -0.21
VMP1-206ENST00000587945 CYP2A13Q16696 494 aa13.74□□□□□ -0.21
VMP1-206ENST00000587945 TYSND1Q2T9J0 566 aa13.74□□□□□ -0.21
VMP1-206ENST00000587945 ZC3H12BQ5HYM0 836 aaKnown RBP13.74□□□□□ -0.21
VMP1-206ENST00000587945 ANKRD22Q5VYY1 191 aa13.74□□□□□ -0.21
VMP1-206ENST00000587945 FRMPD2BQ6IN97 320 aa13.74□□□□□ -0.21
VMP1-206ENST00000587945 MRNIPQ6NTE8 343 aa13.74□□□□□ -0.21
VMP1-206ENST00000587945 SDCCAG8Q86SQ7 713 aaPredicted RBP13.74□□□□□ -0.21
VMP1-206ENST00000587945 FOPNLQ96NB1 174 aa13.74□□□□□ -0.21
VMP1-206ENST00000587945 RAB11FIP5Q9BXF6 653 aa13.74□□□□□ -0.21
VMP1-206ENST00000587945 SOX17Q9H6I2 414 aaPredicted RBP13.74□□□□□ -0.21
VMP1-206ENST00000587945 ZNF552Q9H707 407 aaPredicted RBP13.74□□□□□ -0.21
VMP1-206ENST00000587945 ZBTB20Q9HC78 741 aaPredicted RBP13.74□□□□□ -0.21
VMP1-206ENST00000587945 CTSFQ9UBX1 484 aa13.74□□□□□ -0.21
VMP1-206ENST00000587945 MAU2Q9Y6X3 613 aa13.74□□□□□ -0.21
VMP1-206ENST00000587945 PIKFYVEQ9Y2I7 2098 aa13.74□□□□□ -0.21
VMP1-206ENST00000587945 LOC105369274A0A096LPK9 316 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 LOC102723532A0A0G2JNH3 316 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 A0A0J9YVX5 310 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 A0A1W2PPV9 198 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 TCP11X1B4DZS4 312 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 SEMA7AO75326 666 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 AGFG2O95081 481 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 CHRM3P20309 590 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 CDK16Q00536 496 aa13.73□□□□□ -0.21
VMP1-206ENST00000587945 GPS1Q13098 491 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms