RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 PDYNP01213 254 aa19.25■□□□□ 0.67
TRIM47-204ENST00000587339 HOXC4P09017 264 aaPredicted RBP19.25■□□□□ 0.67
TRIM47-204ENST00000587339 JUPP14923 745 aa19.25■□□□□ 0.67
TRIM47-204ENST00000587339 GNAZP19086 355 aa19.25■□□□□ 0.67
TRIM47-204ENST00000587339 KELP23276 732 aa19.25■□□□□ 0.67
TRIM47-204ENST00000587339 MRPL19P49406 292 aaKnown RBP19.25■□□□□ 0.67
TRIM47-204ENST00000587339 HMGCS1Q01581 520 aa19.25■□□□□ 0.67
TRIM47-204ENST00000587339 TBL3Q12788 808 aaKnown RBP19.25■□□□□ 0.67
TRIM47-204ENST00000587339 RFTN2Q52LD8 501 aaPredicted RBP19.25■□□□□ 0.67
TRIM47-204ENST00000587339 HABP4Q5JVS0 413 aaKnown RBP19.25■□□□□ 0.67
TRIM47-204ENST00000587339 RGL4Q8IZJ4 473 aa19.25■□□□□ 0.67
TRIM47-204ENST00000587339 OR5K2Q8NHB8 316 aa19.25■□□□□ 0.67
TRIM47-204ENST00000587339 FGF22Q9HCT0 170 aa19.25■□□□□ 0.67
TRIM47-204ENST00000587339 MRPS17Q9Y2R5 130 aaKnown RBP19.25■□□□□ 0.67
TRIM47-204ENST00000587339 TDRKHQ9Y2W6 561 aaKnown RBP19.25■□□□□ 0.67
TRIM47-204ENST00000587339 E7ENX8 843 aa19.25■□□□□ 0.67
TRIM47-204ENST00000587339 H0Y8X5 98 aa19.25■□□□□ 0.67
TRIM47-204ENST00000587339 LATO43561 262 aa19.25■□□□□ 0.67
TRIM47-204ENST00000587339 KCNJ13O60928 360 aa19.25■□□□□ 0.67
TRIM47-204ENST00000587339 PNLIPRP1P54315 467 aa19.25■□□□□ 0.67
TRIM47-204ENST00000587339 KIAA1024LP59773 190 aa19.25■□□□□ 0.67
TRIM47-204ENST00000587339 TAP2Q03519 686 aa19.25■□□□□ 0.67
TRIM47-204ENST00000587339 TSTA3Q13630 321 aaPredicted RBP19.25■□□□□ 0.67
TRIM47-204ENST00000587339 UBXN2BQ14CS0 331 aa19.25■□□□□ 0.67
TRIM47-204ENST00000587339 FRG2Q64ET8 278 aa19.25■□□□□ 0.67
TRIM47-204ENST00000587339 FRG2BQ96QU4 278 aa19.25■□□□□ 0.67
TRIM47-204ENST00000587339 NOP53Q9NZM5 478 aaKnown RBP19.25■□□□□ 0.67
TRIM47-204ENST00000587339 SLC7A8Q9UHI5 535 aa19.25■□□□□ 0.67
TRIM47-204ENST00000587339 KCNK6Q9Y257 313 aa19.25■□□□□ 0.67
TRIM47-204ENST00000587339 CA5BQ9Y2D0 317 aa19.25■□□□□ 0.67
TRIM47-204ENST00000587339 PRSS38A1L453 326 aa19.24■□□□□ 0.67
TRIM47-204ENST00000587339 NRP2O60462 931 aa19.24■□□□□ 0.67
TRIM47-204ENST00000587339 IGLV3-19P01714 112 aa19.24■□□□□ 0.67
TRIM47-204ENST00000587339 SLC2A4P14672 509 aa19.24■□□□□ 0.67
TRIM47-204ENST00000587339 GNPDA1P46926 289 aa19.24■□□□□ 0.67
TRIM47-204ENST00000587339 NEK2P51955 445 aa19.24■□□□□ 0.67
TRIM47-204ENST00000587339 MAD2L1Q13257 205 aaPredicted RBP19.24■□□□□ 0.67
TRIM47-204ENST00000587339 DOC2AQ14183 400 aa19.24■□□□□ 0.67
TRIM47-204ENST00000587339 PDCD4Q53EL6 469 aaKnown RBP19.24■□□□□ 0.67
TRIM47-204ENST00000587339 WASHC2DQ5SRD0 308 aa19.24■□□□□ 0.67
TRIM47-204ENST00000587339 SCARF2Q96GP6 870 aaPredicted RBP19.24■□□□□ 0.67
TRIM47-204ENST00000587339 BMFQ96LC9 184 aa19.24■□□□□ 0.67
TRIM47-204ENST00000587339 SGPP1Q9BX95 441 aa19.24■□□□□ 0.67
TRIM47-204ENST00000587339 GPRC5BQ9NZH0 403 aa19.24■□□□□ 0.67
TRIM47-204ENST00000587339 NR5A2O00482 541 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 FBP2O00757 339 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 CD22P20273 847 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 HTR1BP28222 390 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 AKT2P31751 481 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 HNF4AP41235 474 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 RPL38P63173 70 aaKnown RBP19.23■□□□□ 0.67
TRIM47-204ENST00000587339 PCDH1Q08174 1060 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 PRKG2Q13237 762 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 NFATC4Q14934 902 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 SMU1Q2TAY7 513 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 IL23RQ5VWK5 629 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 REP15Q6BDI9 236 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 CAPRIN2Q6IMN6 1127 aaKnown RBP19.23■□□□□ 0.67
TRIM47-204ENST00000587339 ENPP7Q6UWV6 458 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 PGAM4Q8N0Y7 254 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 NEIL2Q969S2 332 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 ACPTQ9BZG2 426 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 TRIT1Q9H3H1 467 aaKnown RBP19.23■□□□□ 0.67
TRIM47-204ENST00000587339 CARS2Q9HA77 564 aaKnown RBP19.23■□□□□ 0.67
TRIM47-204ENST00000587339 WDR41Q9HAD4 459 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 LRTM1Q9HBL6 345 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 CCDC177Q9NQR7 707 aaPredicted RBP19.23■□□□□ 0.67
TRIM47-204ENST00000587339 FBXL21Q9UKT6 434 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 CYP8B1Q9UNU6 501 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 WDR37Q9Y2I8 494 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 KRBA1A5PL33 1030 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 BBIP1A8MTZ0 92 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 SEC22BO75396 215 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 SLC22A3O75751 556 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 CIB2O75838 187 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 NPPBP16860 134 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 SNCBQ16143 134 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 GPR153Q6NV75 609 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 SUSD1Q6UWL2 747 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 LRRC56Q8IYG6 542 aaPredicted RBP19.23■□□□□ 0.67
TRIM47-204ENST00000587339 TBC1D21Q8IYX1 336 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 TSTD1Q8NFU3 115 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 C12orf66Q96MD2 445 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 LTB4R2Q9NPC1 389 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 C2orf42Q9NWW7 574 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 ZIM2Q9NZV7 527 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 WNT16Q9UBV4 365 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 PLAGL1Q9UM63 463 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 PLEKHM1Q9Y4G2 1056 aa19.23■□□□□ 0.67
TRIM47-204ENST00000587339 C9JVG2 144 aa19.22■□□□□ 0.67
TRIM47-204ENST00000587339 ENTPD5O75356 428 aa19.22■□□□□ 0.67
TRIM47-204ENST00000587339 G6PDP11413 515 aa19.22■□□□□ 0.67
TRIM47-204ENST00000587339 IDSP22304 550 aa19.22■□□□□ 0.67
TRIM47-204ENST00000587339 UFM1P61960 85 aa19.22■□□□□ 0.67
TRIM47-204ENST00000587339 GAS6Q14393 721 aa19.22■□□□□ 0.67
TRIM47-204ENST00000587339 KPNB1Q14974 876 aaKnown RBP19.22■□□□□ 0.67
TRIM47-204ENST00000587339 VPS26BQ4G0F5 336 aa19.22■□□□□ 0.67
TRIM47-204ENST00000587339 C6orf163Q5TEZ5 329 aa19.22■□□□□ 0.67
TRIM47-204ENST00000587339 GRHL2Q6ISB3 625 aa19.22■□□□□ 0.67
TRIM47-204ENST00000587339 BLOC1S3Q6QNY0 202 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms