RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 SLC30A3Q99726 388 aa18.77■□□□□ 0.6
SREBF1-220ENST00000581707 FAM117AQ9C073 453 aa18.77■□□□□ 0.6
SREBF1-220ENST00000581707 SLC25A18Q9H1K4 315 aa18.77■□□□□ 0.6
SREBF1-220ENST00000581707 FAM114A2Q9NRY5 505 aa18.77■□□□□ 0.6
SREBF1-220ENST00000581707 INTS7Q9NVH2 962 aaKnown RBP18.77■□□□□ 0.6
SREBF1-220ENST00000581707 TUBD1Q9UJT1 453 aa18.77■□□□□ 0.6
SREBF1-220ENST00000581707 MED16Q9Y2X0 877 aa18.77■□□□□ 0.6
SREBF1-220ENST00000581707 KCNMB2Q9Y691 235 aa18.77■□□□□ 0.6
SREBF1-220ENST00000581707 COMMD10Q9Y6G5 202 aa18.77■□□□□ 0.6
SREBF1-220ENST00000581707 PCM1Q15154 2024 aa18.77■□□□□ 0.6
SREBF1-220ENST00000581707 TTI1O43156 1089 aa18.76■□□□□ 0.59
SREBF1-220ENST00000581707 PSIP1O75475 530 aaKnown RBP18.76■□□□□ 0.59
SREBF1-220ENST00000581707 FKBP9O95302 570 aa18.76■□□□□ 0.59
SREBF1-220ENST00000581707 RAB40ALP0C0E4 278 aa18.76■□□□□ 0.59
SREBF1-220ENST00000581707 ERVK-10P10266 1014 aa18.76■□□□□ 0.59
SREBF1-220ENST00000581707 CYP2A13Q16696 494 aa18.76■□□□□ 0.59
SREBF1-220ENST00000581707 PTCHD3Q3KNS1 767 aa18.76■□□□□ 0.59
SREBF1-220ENST00000581707 TLDC1Q6P9B6 456 aa18.76■□□□□ 0.59
SREBF1-220ENST00000581707 FIGLAQ6QHK4 219 aa18.76■□□□□ 0.59
SREBF1-220ENST00000581707 NEK10Q6ZWH5 1172 aa18.76■□□□□ 0.59
SREBF1-220ENST00000581707 SYVN1Q86TM6 617 aa18.76■□□□□ 0.59
SREBF1-220ENST00000581707 IGDCC3Q8IVU1 814 aa18.76■□□□□ 0.59
SREBF1-220ENST00000581707 C2CD4AQ8NCU7 369 aaPredicted RBP18.76■□□□□ 0.59
SREBF1-220ENST00000581707 OR9A1PQ8NGU1 263 aa18.76■□□□□ 0.59
SREBF1-220ENST00000581707 GIMAP7Q8NHV1 300 aa18.76■□□□□ 0.59
SREBF1-220ENST00000581707 INPP5DQ92835 1189 aa18.76■□□□□ 0.59
SREBF1-220ENST00000581707 DPH2Q9BQC3 489 aaPredicted RBP18.76■□□□□ 0.59
SREBF1-220ENST00000581707 TRIM51Q9BSJ1 452 aa18.76■□□□□ 0.59
SREBF1-220ENST00000581707 NLNQ9BYT8 704 aa18.76■□□□□ 0.59
SREBF1-220ENST00000581707 IRAK4Q9NWZ3 460 aa18.76■□□□□ 0.59
SREBF1-220ENST00000581707 EURLQ9NYK6 297 aa18.76■□□□□ 0.59
SREBF1-220ENST00000581707 SPATA7Q9P0W8 599 aa18.76■□□□□ 0.59
SREBF1-220ENST00000581707 DHRS7Q9Y394 339 aa18.76■□□□□ 0.59
SREBF1-220ENST00000581707 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.76■□□□□ 0.59
SREBF1-220ENST00000581707 ARHGEF33A8MVX0 844 aa18.75■□□□□ 0.59
SREBF1-220ENST00000581707 SMAPO00193 183 aa18.75■□□□□ 0.59
SREBF1-220ENST00000581707 ZSCAN9O15535 394 aaPredicted RBP18.75■□□□□ 0.59
SREBF1-220ENST00000581707 CATP04040 527 aaKnown RBP18.75■□□□□ 0.59
SREBF1-220ENST00000581707 CTSBP07858 339 aa18.75■□□□□ 0.59
SREBF1-220ENST00000581707 AGXTP21549 392 aa18.75■□□□□ 0.59
SREBF1-220ENST00000581707 CUL1Q13616 776 aa18.75■□□□□ 0.59
SREBF1-220ENST00000581707 UGT8Q16880 541 aa18.75■□□□□ 0.59
SREBF1-220ENST00000581707 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.75■□□□□ 0.59
SREBF1-220ENST00000581707 FCRL6Q6DN72 434 aa18.75■□□□□ 0.59
SREBF1-220ENST00000581707 HIBCHQ6NVY1 386 aaPredicted RBP18.75■□□□□ 0.59
SREBF1-220ENST00000581707 MCATQ8IVS2 390 aaKnown RBP18.75■□□□□ 0.59
SREBF1-220ENST00000581707 ZNF655Q8N720 491 aaPredicted RBP18.75■□□□□ 0.59
SREBF1-220ENST00000581707 ENDOVQ8N8Q3 282 aaKnown RBP18.75■□□□□ 0.59
SREBF1-220ENST00000581707 ZUFSPQ96AP4 578 aa18.75■□□□□ 0.59
SREBF1-220ENST00000581707 PWWP2AQ96N64 755 aa18.75■□□□□ 0.59
SREBF1-220ENST00000581707 GPR21Q99679 349 aa18.75■□□□□ 0.59
SREBF1-220ENST00000581707 AARSD1Q9BTE6 412 aaKnown RBP18.75■□□□□ 0.59
SREBF1-220ENST00000581707 MYO1CO00159 1063 aa18.74■□□□□ 0.59
SREBF1-220ENST00000581707 VPS26AO75436 327 aa18.74■□□□□ 0.59
SREBF1-220ENST00000581707 CAPN1P07384 714 aa18.74■□□□□ 0.59
SREBF1-220ENST00000581707 ENO3P13929 434 aaPredicted RBP18.74■□□□□ 0.59
SREBF1-220ENST00000581707 PLA2G2AP14555 144 aa18.74■□□□□ 0.59
SREBF1-220ENST00000581707 PSMB5P28074 263 aa18.74■□□□□ 0.59
SREBF1-220ENST00000581707 ELK3P41970 407 aa18.74■□□□□ 0.59
SREBF1-220ENST00000581707 ITGA8P53708 1063 aa18.74■□□□□ 0.59
SREBF1-220ENST00000581707 FASTKQ14296 549 aaKnown RBP18.74■□□□□ 0.59
SREBF1-220ENST00000581707 ZC3H12BQ5HYM0 836 aaKnown RBP18.74■□□□□ 0.59
SREBF1-220ENST00000581707 HP1BP3Q5SSJ5 553 aaPredicted RBP18.74■□□□□ 0.59
SREBF1-220ENST00000581707 ZNF385CQ66K41 422 aaPredicted RBP18.74■□□□□ 0.59
SREBF1-220ENST00000581707 RHBDD2Q6NTF9 364 aa18.74■□□□□ 0.59
SREBF1-220ENST00000581707 SPNS2Q8IVW8 549 aa18.74■□□□□ 0.59
SREBF1-220ENST00000581707 ASB11Q8WXH4 323 aa18.74■□□□□ 0.59
SREBF1-220ENST00000581707 SNF8Q96H20 258 aa18.74■□□□□ 0.59
SREBF1-220ENST00000581707 KRT12Q99456 494 aa18.74■□□□□ 0.59
SREBF1-220ENST00000581707 MIPEPQ99797 713 aa18.74■□□□□ 0.59
SREBF1-220ENST00000581707 TRIM31Q9BZY9 425 aa18.74■□□□□ 0.59
SREBF1-220ENST00000581707 SNX7Q9UNH6 387 aa18.74■□□□□ 0.59
SREBF1-220ENST00000581707 MAN2B2Q9Y2E5 1009 aa18.74■□□□□ 0.59
SREBF1-220ENST00000581707 A0A1W2PPV9 198 aa18.73■□□□□ 0.59
SREBF1-220ENST00000581707 TARM1B6A8C7 271 aa18.73■□□□□ 0.59
SREBF1-220ENST00000581707 C9J4A7 227 aa18.73■□□□□ 0.59
SREBF1-220ENST00000581707 SEC31AO94979 1220 aaKnown RBP18.73■□□□□ 0.59
SREBF1-220ENST00000581707 MPC1LP0DKB6 136 aa18.73■□□□□ 0.59
SREBF1-220ENST00000581707 CBSLP0DN79 551 aa18.73■□□□□ 0.59
SREBF1-220ENST00000581707 ERGP11308 486 aa18.73■□□□□ 0.59
SREBF1-220ENST00000581707 CBSP35520 551 aa18.73■□□□□ 0.59
SREBF1-220ENST00000581707 GRIA3P42263 894 aa18.73■□□□□ 0.59
SREBF1-220ENST00000581707 ARL4CP56559 192 aa18.73■□□□□ 0.59
SREBF1-220ENST00000581707 IL10RAQ13651 578 aa18.73■□□□□ 0.59
SREBF1-220ENST00000581707 ARHGAP19Q14CB8 494 aa18.73■□□□□ 0.59
SREBF1-220ENST00000581707 HIF1AQ16665 826 aa18.73■□□□□ 0.59
SREBF1-220ENST00000581707 C1orf189Q5VU69 101 aa18.73■□□□□ 0.59
SREBF1-220ENST00000581707 FAM198BQ6UWH4 519 aa18.73■□□□□ 0.59
SREBF1-220ENST00000581707 CYHR1Q6ZMK1 362 aa18.73■□□□□ 0.59
SREBF1-220ENST00000581707 C17orf53Q8N3J3 647 aaPredicted RBP18.73■□□□□ 0.59
SREBF1-220ENST00000581707 OR2L3Q8NG85 312 aa18.73■□□□□ 0.59
SREBF1-220ENST00000581707 OR2A1Q8NGT9 310 aa18.73■□□□□ 0.59
SREBF1-220ENST00000581707 CD200R1Q8TD46 325 aa18.73■□□□□ 0.59
SREBF1-220ENST00000581707 THAP4Q8WY91 577 aa18.73■□□□□ 0.59
SREBF1-220ENST00000581707 LRRC39Q96DD0 335 aa18.73■□□□□ 0.59
SREBF1-220ENST00000581707 CERS2Q96G23 380 aa18.73■□□□□ 0.59
SREBF1-220ENST00000581707 CFAP36Q96G28 342 aa18.73■□□□□ 0.59
SREBF1-220ENST00000581707 PKP4Q99569 1192 aa18.73■□□□□ 0.59
SREBF1-220ENST00000581707 NDC1Q9BTX1 674 aa18.73■□□□□ 0.59
SREBF1-220ENST00000581707 PPANQ9NQ55 473 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms