RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 HNMTP50135 292 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 PRKAA2P54646 552 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 DNAJB13P59910 316 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 ACTR1AP61163 376 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 NFKB2Q00653 900 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 C19orf57Q0VDD7 668 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 TCF15Q12870 199 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 ABRQ12979 859 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 CLCA4Q14CN2 919 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 TGFBIQ15582 683 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 ZNF542PQ5EBM4 170 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 PRRT3Q5FWE3 981 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 LAIR1Q6GTX8 287 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 OGFOD3Q6PK18 319 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 LAYNQ6UX15 382 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 PRR23BQ6ZRT6 265 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 CHSY3Q70JA7 882 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 UBE2R2Q712K3 238 aaPredicted RBP7.79□□□□□ -1.16
COPS3-215ENST00000578317 GKN2Q86XP6 184 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 TBC1D21Q8IYX1 336 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 IL22RA1Q8N6P7 574 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 OR6Y1Q8NGX8 325 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 OR5K2Q8NHB8 316 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 CCL4L1Q8NHW4 92 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 MDM1Q8TC05 714 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 NUDT8Q8WV74 236 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 HIST1H2AHQ96KK5 128 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 HIST1H2AJQ99878 128 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 H2AFJQ9BTM1 129 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 LRRC61Q9BV99 259 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 TCEAL2Q9H3H9 227 aaPredicted RBP7.79□□□□□ -1.16
COPS3-215ENST00000578317 MVB12BQ9H7P6 319 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 PRDM8Q9NQV8 689 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 OXSMQ9NWU1 459 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 XPR1Q9UBH6 696 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 RAB23Q9ULC3 237 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 PDE10AQ9Y233 779 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 WDR37Q9Y2I8 494 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 SNX11Q9Y5W9 270 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 R4GN57 208 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 KNL1Q8NG31 2342 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 LRRK1Q38SD2 2015 aa7.79□□□□□ -1.16
COPS3-215ENST00000578317 GPR179Q6PRD1 2367 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 KIR2DS5A0A0G2JLQ3 304 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 A0A0G2JNG1 304 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 A0A1B0GTQ1 180 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 NEMP2A6NFY4 417 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 STX16-NPEPL1H3BU86 382 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 KIR2DS3K7RE56 304 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 MYO1CO00159 1063 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 STX16O14662 325 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 SCAMP1O15126 338 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 YY2O15391 372 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 FFAR2O15552 330 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 AQP9O43315 295 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 IPO13O94829 963 aaKnown RBP7.78□□□□□ -1.16
COPS3-215ENST00000578317 SYPP08247 313 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 CHN1P15882 459 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 TAC1P20366 129 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 AK4P27144 223 aaPredicted RBP7.78□□□□□ -1.16
COPS3-215ENST00000578317 RPL10P27635 214 aaKnown RBP7.78□□□□□ -1.16
COPS3-215ENST00000578317 MAP4P27816 1152 aaKnown RBP7.78□□□□□ -1.16
COPS3-215ENST00000578317 HSD17B2P37059 387 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 GLRBP48167 497 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 NAA20P61599 178 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 GRIK2Q13002 908 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 KIR2DS5Q14953 304 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 ARHGAP19Q14CB8 494 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 SHBQ15464 509 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 RPE65Q16518 533 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 PLA2G4EQ3MJ16 856 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 TUBB8Q3ZCM7 444 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 ZYG11AQ6WRX3 759 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 C8orf86Q6ZUL3 223 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 TAF8Q7Z7C8 310 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 C17orf82Q86X59 251 aaPredicted RBP7.78□□□□□ -1.16
COPS3-215ENST00000578317 SLC22A9Q8IVM8 553 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 RBM12BQ8IXT5 1001 aaKnown RBP7.78□□□□□ -1.16
COPS3-215ENST00000578317 TCAIMQ8N3R3 496 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 AVL9Q8NBF6 648 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 SUMF1Q8NBK3 374 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 PDPRQ8NCN5 879 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 SKA2Q8WVK7 121 aaPredicted RBP7.78□□□□□ -1.16
COPS3-215ENST00000578317 RAD51AP1Q96B01 352 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 SCYL1Q96KG9 808 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 RMDN2Q96LZ7 410 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 CCDC138Q96M89 665 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 SELENOSQ9BQE4 189 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 C1QTNF3Q9BXJ4 246 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 WWP1Q9H0M0 922 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 C12orf65Q9H3J6 166 aaKnown RBP7.78□□□□□ -1.16
COPS3-215ENST00000578317 INTS9Q9NV88 658 aaKnown RBP7.78□□□□□ -1.16
COPS3-215ENST00000578317 NUDT4Q9NZJ9 180 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 TAAR2Q9P1P5 351 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 CPSF2Q9P2I0 782 aaKnown RBP7.78□□□□□ -1.16
COPS3-215ENST00000578317 POLG2Q9UHN1 485 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 PTBP2Q9UKA9 531 aaKnown RBP7.78□□□□□ -1.16
COPS3-215ENST00000578317 ADAMTS6Q9UKP5 1117 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 RNF112Q9ULX5 631 aa7.78□□□□□ -1.16
COPS3-215ENST00000578317 ASF1AQ9Y294 204 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms