RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 THAP10Q9P2Z0 257 aaPredicted RBP13.47□□□□□ -0.25
RNF43-202ENST00000577625 COPG1Q9Y678 874 aaKnown RBP13.47□□□□□ -0.25
RNF43-202ENST00000577625 FADS2P1A8MWK0 482 aa13.46□□□□□ -0.25
RNF43-202ENST00000577625 PLOD2O00469 737 aa13.46□□□□□ -0.25
RNF43-202ENST00000577625 RAD51BO15315 384 aa13.46□□□□□ -0.25
RNF43-202ENST00000577625 ZNF182P17025 639 aaPredicted RBP13.46□□□□□ -0.25
RNF43-202ENST00000577625 TMBIM6P55061 237 aa13.46□□□□□ -0.25
RNF43-202ENST00000577625 IFITM2Q01629 132 aa13.46□□□□□ -0.25
RNF43-202ENST00000577625 CEACAM7Q14002 265 aa13.46□□□□□ -0.25
RNF43-202ENST00000577625 NHSL2Q5HYW2 709 aa13.46□□□□□ -0.25
RNF43-202ENST00000577625 COL13A1Q5TAT6 717 aaPredicted RBP13.46□□□□□ -0.25
RNF43-202ENST00000577625 USP43Q70EL4 1123 aa13.46□□□□□ -0.25
RNF43-202ENST00000577625 LARP4Q71RC2 724 aaKnown RBP eCLIP13.46□□□□□ -0.25
RNF43-202ENST00000577625 ZC3H7AQ8IWR0 971 aaKnown RBP13.46□□□□□ -0.25
RNF43-202ENST00000577625 PGAM4Q8N0Y7 254 aa13.46□□□□□ -0.25
RNF43-202ENST00000577625 TRAM1L1Q8N609 369 aa13.46□□□□□ -0.25
RNF43-202ENST00000577625 TFAP2CQ92754 450 aa13.46□□□□□ -0.25
RNF43-202ENST00000577625 RIPOR3Q96MK2 946 aa13.46□□□□□ -0.25
RNF43-202ENST00000577625 ACOX2Q99424 681 aa13.46□□□□□ -0.25
RNF43-202ENST00000577625 FAM126AQ9BYI3 521 aaPredicted RBP13.46□□□□□ -0.25
RNF43-202ENST00000577625 SEMA4BQ9NPR2 832 aaPredicted RBP13.46□□□□□ -0.25
RNF43-202ENST00000577625 KCTD5Q9NXV2 234 aa13.46□□□□□ -0.25
RNF43-202ENST00000577625 OARD1Q9Y530 152 aa13.46□□□□□ -0.25
RNF43-202ENST00000577625 N6AMT1Q9Y5N5 214 aa13.46□□□□□ -0.25
RNF43-202ENST00000577625 SPTBN5Q9NRC6 3674 aaKnown RBP13.46□□□□□ -0.26
RNF43-202ENST00000577625 PLK4O00444 970 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 E2F3O00716 465 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 ACOT8O14734 319 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 ZFC3H1O60293 1989 aaKnown RBP13.45□□□□□ -0.26
RNF43-202ENST00000577625 GUCY1B2O75343 617 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 OR56A5P0C7T3 313 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 CBSLP0DN79 551 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 CBSP35520 551 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 FOXA1P55317 472 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 PCBP2Q15366 365 aaKnown RBP eCLIP13.45□□□□□ -0.267e-7■■□□□ 14.5
RNF43-202ENST00000577625 ITPRIPL2Q3MIP1 535 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 TWIST2Q8WVJ9 160 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 MED30Q96HR3 178 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 ZSCAN5AQ9BUG6 496 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 WRAP53Q9BUR4 548 aaKnown RBP13.45□□□□□ -0.26
RNF43-202ENST00000577625 TRPM6Q9BX84 2022 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 DOCK9Q9BZ29 2069 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 SEMA6AQ9H2E6 1030 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 ZNF576Q9H609 170 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 CLDND1Q9NY35 253 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 ASB1Q9Y576 335 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 TNPO3Q9Y5L0 923 aaKnown RBP13.45□□□□□ -0.26
RNF43-202ENST00000577625 A0A1B0GTL3 188 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 CLDN25C9JDP6 229 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 H0Y858 1186 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 PSMD11O00231 422 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 AREL1O15033 823 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 CLOCKO15516 846 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 FFAR2O15552 330 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 AKAP10O43572 662 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 MTX2O75431 263 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 ATP1B2P14415 290 aaPredicted RBP13.45□□□□□ -0.26
RNF43-202ENST00000577625 MYF6P23409 242 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 AKT1P31749 480 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 CCR7P32248 378 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 LTBRP36941 435 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 TPTEP56180 551 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 ACOX1Q15067 660 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 DET1Q7L5Y6 550 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 SNX32Q86XE0 403 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 OR56A4Q8NGH8 313 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 SUSD6Q92537 303 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 MARK4Q96L34 752 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 COQ10AQ96MF6 247 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 TRMT61BQ9BVS5 477 aaKnown RBP13.45□□□□□ -0.26
RNF43-202ENST00000577625 RMND5AQ9H871 391 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 NANOGQ9H9S0 305 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 PRSS16Q9NQE7 514 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 CACNA2D2Q9NY47 1150 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 CRNNQ9UBG3 495 aaPredicted RBP13.45□□□□□ -0.26
RNF43-202ENST00000577625 EIF2B4Q9UI10 523 aaKnown RBP13.45□□□□□ -0.26
RNF43-202ENST00000577625 SATB2Q9UPW6 733 aa13.45□□□□□ -0.26
RNF43-202ENST00000577625 UBDO15205 165 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 JRKO75564 520 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 EPHX1P07099 455 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 ENO3P13929 434 aaPredicted RBP13.44□□□□□ -0.26
RNF43-202ENST00000577625 ADRB3P13945 408 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 CD1EP15812 388 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 HPCAL1P37235 193 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 PKNOX1P55347 436 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 SQLEQ14534 574 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 GBX1Q14549 363 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 ZNF284Q2VY69 593 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 SIGIRRQ6IA17 410 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 ANKRD13BQ86YJ7 626 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 ESAMQ96AP7 390 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 DTD2Q96FN9 168 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 PPP1R16AQ96I34 528 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 C3orf30Q96M34 536 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 KCNA7Q96RP8 456 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 SLC29A1Q99808 456 aa13.44□□□□□ -0.26
RNF43-202ENST00000577625 NUSAP1Q9BXS6 441 aaKnown RBP13.44□□□□□ -0.26
RNF43-202ENST00000577625 WDR12Q9GZL7 423 aaKnown RBP13.44□□□□□ -0.26
RNF43-202ENST00000577625 NAA50Q9GZZ1 169 aaKnown RBP13.44□□□□□ -0.26
RNF43-202ENST00000577625 POLR1BQ9H9Y6 1135 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms