RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 PHACTR1Q9C0D0 580 aa13.32□□□□□ -0.28
HERPUD1-218ENST00000569569 GPN2Q9H9Y4 310 aaPredicted RBP13.32□□□□□ -0.28
HERPUD1-218ENST00000569569 FAM60AQ9NP50 221 aa13.32□□□□□ -0.28
HERPUD1-218ENST00000569569 LHX9Q9NQ69 397 aa13.32□□□□□ -0.28
HERPUD1-218ENST00000569569 INTS7Q9NVH2 962 aaKnown RBP13.32□□□□□ -0.28
HERPUD1-218ENST00000569569 SLC17A6Q9P2U8 582 aa13.32□□□□□ -0.28
HERPUD1-218ENST00000569569 VWA7Q9Y334 891 aa13.32□□□□□ -0.28
HERPUD1-218ENST00000569569 PCDHB3Q9Y5E6 796 aa13.32□□□□□ -0.28
HERPUD1-218ENST00000569569 PCDHGA4Q9Y5G9 962 aa13.32□□□□□ -0.28
HERPUD1-218ENST00000569569 KRT87PA6NCN2 255 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 GFYI3L273 518 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 MYO1CO00159 1063 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 CPNE3O75131 537 aaKnown RBP13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 ERGP11308 486 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 WT1P19544 449 aaPredicted RBP13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 MAGP20916 626 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 SSTR1P30872 391 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 HSD17B2P37059 387 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 CDKN2DP55273 166 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 ITGA1P56199 1179 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 SLC7A5Q01650 507 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 ARHGAP19Q14CB8 494 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 TRADDQ15628 312 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 ZIC1Q15915 447 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 HECTD2Q5U5R9 776 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 FAM45BPQ6NSW5 357 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 PAQR3Q6TCH7 311 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 CYS1Q717R9 158 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 FAM20CQ8IXL6 584 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 MMGT1Q8N4V1 131 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 DNAJC22Q8N4W6 341 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 GPATCH11Q8N954 259 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 MNS1Q8NEH6 495 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 OR1L3Q8NH93 324 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 KIF18AQ8NI77 898 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 FAM45AQ8TCE6 357 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 EEF1AKMT1Q8WVE0 214 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 ZUFSPQ96AP4 578 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 SLC45A3Q96JT2 553 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 NSMCE4AQ9NXX6 385 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 CACNA1GO43497 2377 aa13.31□□□□□ -0.28
HERPUD1-218ENST00000569569 A0A1W2PPV9 198 aa13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 ZNF839A8K0R7 811 aa13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 ZNF891A8MT65 544 aaPredicted RBP13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 TARM1B6A8C7 271 aa13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 E7EQ34 232 aa13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 ERVH48-1M5A8F1 160 aa13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 KLK3P07288 261 aaPredicted RBP13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 GSTA2P09210 222 aa13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 CYP2A7P20853 494 aa13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 DLSTP36957 453 aa13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 GABRA4P48169 554 aa13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 ILF2Q12905 390 aaKnown RBP13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 PDAP1Q13442 181 aaKnown RBP13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 FASTKQ14296 549 aaKnown RBP13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 KIAA1614Q5VZ46 1190 aa13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 FIGLAQ6QHK4 219 aa13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 ZDHHC24Q6UX98 284 aa13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 CAPN12Q6ZSI9 719 aa13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 C3orf62Q6ZUJ4 267 aa13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 UBE2R2Q712K3 238 aaPredicted RBP13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 PIWIL4Q7Z3Z4 852 aaKnown RBP13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 STRA8Q7Z7C7 330 aa13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 SPNS2Q8IVW8 549 aa13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 GPR135Q8IZ08 494 aa13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 SMPDL3AQ92484 453 aa13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 SEC14L1Q92503 715 aa13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 CDKL2Q92772 493 aa13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 LRFN5Q96NI6 719 aa13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 PKP4Q99569 1192 aa13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 SLC12A9Q9BXP2 914 aa13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 KCND3Q9UK17 655 aa13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 CROTQ9UKG9 612 aa13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 PLCL2Q9UPR0 1127 aa13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 PSAT1Q9Y617 370 aa13.3□□□□□ -0.28
HERPUD1-218ENST00000569569 CTAGE15A4D2H0 777 aa13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 HCRTR1O43613 425 aa13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 SYF2O95926 243 aaKnown RBP13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 C8GP07360 202 aa13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 HBQ1P09105 142 aa13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 CTAGE8P0CG41 777 aa13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 TCN2P20062 427 aa13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 FDXRP22570 491 aa13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 MAGEA4P43358 317 aa13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 PNLIPRP1P54315 467 aa13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 IL2P60568 153 aa13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 MC1RQ01726 317 aa13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 DEFB110Q30KQ9 67 aa13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 ZC3H12BQ5HYM0 836 aaKnown RBP13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 PRAMEF17Q5VTA0 474 aa13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 FCRL6Q6DN72 434 aa13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 CTAGE6Q86UF2 777 aa13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 ZC3HC1Q86WB0 502 aaKnown RBP13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 CCDC25Q86WR0 208 aa13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 CTAGE4Q8IX94 777 aa13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 MYO1HQ8N1T3 1032 aa13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 SLC38A9Q8NBW4 561 aa13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 LSM14AQ8ND56 463 aaKnown RBP13.29□□□□□ -0.28
HERPUD1-218ENST00000569569 OR2L3Q8NG85 312 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms