RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 PAFAH1B1P43034 410 aa19.52■□□□□ 0.72
CLK3-225ENST00000569063 MORF4L2Q15014 288 aa19.52■□□□□ 0.72
CLK3-225ENST00000569063 CYP2A13Q16696 494 aa19.52■□□□□ 0.72
CLK3-225ENST00000569063 TTLL9Q3SXZ7 439 aa19.52■□□□□ 0.72
CLK3-225ENST00000569063 FAM198BQ6UWH4 519 aa19.52■□□□□ 0.72
CLK3-225ENST00000569063 TAX1BP1Q86VP1 789 aa19.52■□□□□ 0.72
CLK3-225ENST00000569063 ENDOVQ8N8Q3 282 aaKnown RBP19.52■□□□□ 0.72
CLK3-225ENST00000569063 THAP4Q8WY91 577 aa19.52■□□□□ 0.72
CLK3-225ENST00000569063 ZUFSPQ96AP4 578 aa19.52■□□□□ 0.72
CLK3-225ENST00000569063 SLC30A3Q99726 388 aa19.52■□□□□ 0.72
CLK3-225ENST00000569063 EURLQ9NYK6 297 aa19.52■□□□□ 0.72
CLK3-225ENST00000569063 KLHL20Q9Y2M5 609 aa19.52■□□□□ 0.72
CLK3-225ENST00000569063 DHRS7Q9Y394 339 aa19.52■□□□□ 0.72
CLK3-225ENST00000569063 KLK4Q9Y5K2 254 aa19.52■□□□□ 0.72
CLK3-225ENST00000569063 KRT87PA6NCN2 255 aa19.51■□□□□ 0.71
CLK3-225ENST00000569063 ARHGEF33A8MVX0 844 aa19.51■□□□□ 0.71
CLK3-225ENST00000569063 MYO1CO00159 1063 aa19.51■□□□□ 0.71
CLK3-225ENST00000569063 FANCGO15287 622 aa19.51■□□□□ 0.71
CLK3-225ENST00000569063 CTSBP07858 339 aa19.51■□□□□ 0.71
CLK3-225ENST00000569063 ERGP11308 486 aa19.51■□□□□ 0.71
CLK3-225ENST00000569063 IL10RAQ13651 578 aa19.51■□□□□ 0.71
CLK3-225ENST00000569063 PTCHD3Q3KNS1 767 aa19.51■□□□□ 0.71
CLK3-225ENST00000569063 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.51■□□□□ 0.71
CLK3-225ENST00000569063 SPANXN3Q5MJ09 141 aa19.51■□□□□ 0.71
CLK3-225ENST00000569063 FCRL6Q6DN72 434 aa19.51■□□□□ 0.71
CLK3-225ENST00000569063 FIGLAQ6QHK4 219 aa19.51■□□□□ 0.71
CLK3-225ENST00000569063 MCATQ8IVS2 390 aaKnown RBP19.51■□□□□ 0.71
CLK3-225ENST00000569063 C2CD4AQ8NCU7 369 aaPredicted RBP19.51■□□□□ 0.71
CLK3-225ENST00000569063 OR2A1Q8NGT9 310 aa19.51■□□□□ 0.71
CLK3-225ENST00000569063 OR9A1PQ8NGU1 263 aa19.51■□□□□ 0.71
CLK3-225ENST00000569063 GIMAP7Q8NHV1 300 aa19.51■□□□□ 0.71
CLK3-225ENST00000569063 GABPB2Q8TAK5 448 aaPredicted RBP19.51■□□□□ 0.71
CLK3-225ENST00000569063 PROKR1Q8TCW9 393 aa19.51■□□□□ 0.71
CLK3-225ENST00000569063 ENAMQ9NRM1 1142 aa19.51■□□□□ 0.71
CLK3-225ENST00000569063 FAM114A2Q9NRY5 505 aa19.51■□□□□ 0.71
CLK3-225ENST00000569063 IARS2Q9NSE4 1012 aaKnown RBP19.51■□□□□ 0.71
CLK3-225ENST00000569063 TSR3Q9UJK0 312 aaKnown RBP19.51■□□□□ 0.71
CLK3-225ENST00000569063 TCFL5Q9UL49 500 aa19.51■□□□□ 0.71
CLK3-225ENST00000569063 SRPK3Q9UPE1 567 aa19.51■□□□□ 0.71
CLK3-225ENST00000569063 MAN2B2Q9Y2E5 1009 aa19.51■□□□□ 0.71
CLK3-225ENST00000569063 A0A1W2PPV9 198 aa19.5■□□□□ 0.71
CLK3-225ENST00000569063 BANF1O75531 89 aa19.5■□□□□ 0.71
CLK3-225ENST00000569063 CATP04040 527 aaKnown RBP19.5■□□□□ 0.71
CLK3-225ENST00000569063 ERVK-10P10266 1014 aa19.5■□□□□ 0.71
CLK3-225ENST00000569063 GRIA3P42263 894 aa19.5■□□□□ 0.71
CLK3-225ENST00000569063 PMS2P54278 862 aa19.5■□□□□ 0.71
CLK3-225ENST00000569063 MPP1Q00013 466 aa19.5■□□□□ 0.71
CLK3-225ENST00000569063 ARHGAP19Q14CB8 494 aa19.5■□□□□ 0.71
CLK3-225ENST00000569063 ZC3H12BQ5HYM0 836 aaKnown RBP19.5■□□□□ 0.71
CLK3-225ENST00000569063 HIBCHQ6NVY1 386 aaPredicted RBP19.5■□□□□ 0.71
CLK3-225ENST00000569063 IGDCC3Q8IVU1 814 aa19.5■□□□□ 0.71
CLK3-225ENST00000569063 APLFQ8IW19 511 aaPredicted RBP19.5■□□□□ 0.71
CLK3-225ENST00000569063 CNTN4Q8IWV2 1026 aa19.5■□□□□ 0.71
CLK3-225ENST00000569063 PDIK1LQ8N165 341 aa19.5■□□□□ 0.71
CLK3-225ENST00000569063 ZNF655Q8N720 491 aaPredicted RBP19.5■□□□□ 0.71
CLK3-225ENST00000569063 FBXO15Q8NCQ5 510 aaPredicted RBP19.5■□□□□ 0.71
CLK3-225ENST00000569063 OR2L3Q8NG85 312 aa19.5■□□□□ 0.71
CLK3-225ENST00000569063 C9orf43Q8TAL5 461 aaPredicted RBP19.5■□□□□ 0.71
CLK3-225ENST00000569063 ADAMTS17Q8TE56 1095 aa19.5■□□□□ 0.71
CLK3-225ENST00000569063 INPP5DQ92835 1189 aa19.5■□□□□ 0.71
CLK3-225ENST00000569063 ABHD17AQ96GS6 310 aa19.5■□□□□ 0.71
CLK3-225ENST00000569063 AARSD1Q9BTE6 412 aaKnown RBP19.5■□□□□ 0.71
CLK3-225ENST00000569063 HEMK1Q9Y5R4 338 aaPredicted RBP19.5■□□□□ 0.71
CLK3-225ENST00000569063 C9J4A7 227 aa19.49■□□□□ 0.71
CLK3-225ENST00000569063 SUV39H1O43463 412 aa19.49■□□□□ 0.71
CLK3-225ENST00000569063 MPC1LP0DKB6 136 aa19.49■□□□□ 0.71
CLK3-225ENST00000569063 CBSLP0DN79 551 aa19.49■□□□□ 0.71
CLK3-225ENST00000569063 ENO3P13929 434 aaPredicted RBP19.49■□□□□ 0.71
CLK3-225ENST00000569063 PSMB5P28074 263 aa19.49■□□□□ 0.71
CLK3-225ENST00000569063 CBSP35520 551 aa19.49■□□□□ 0.71
CLK3-225ENST00000569063 GCGRP47871 477 aa19.49■□□□□ 0.71
CLK3-225ENST00000569063 CUL1Q13616 776 aa19.49■□□□□ 0.71
CLK3-225ENST00000569063 FASTKQ14296 549 aaKnown RBP19.49■□□□□ 0.71
CLK3-225ENST00000569063 NCF4Q15080 339 aa19.49■□□□□ 0.71
CLK3-225ENST00000569063 BBS9Q3SYG4 887 aa19.49■□□□□ 0.71
CLK3-225ENST00000569063 CYHR1Q6ZMK1 362 aa19.49■□□□□ 0.71
CLK3-225ENST00000569063 CD200R1Q8TD46 325 aa19.49■□□□□ 0.71
CLK3-225ENST00000569063 ASB11Q8WXH4 323 aa19.49■□□□□ 0.71
CLK3-225ENST00000569063 GBP5Q96PP8 586 aa19.49■□□□□ 0.71
CLK3-225ENST00000569063 GPR21Q99679 349 aa19.49■□□□□ 0.71
CLK3-225ENST00000569063 C17orf62Q9BQA9 187 aa19.49■□□□□ 0.71
CLK3-225ENST00000569063 DHRS4Q9BTZ2 278 aa19.49■□□□□ 0.71
CLK3-225ENST00000569063 SNX7Q9UNH6 387 aa19.49■□□□□ 0.71
CLK3-225ENST00000569063 SPTBP11277 2137 aa19.49■□□□□ 0.71
CLK3-225ENST00000569063 FASNP49327 2511 aaKnown RBP19.49■□□□□ 0.71
CLK3-225ENST00000569063 BSNQ9UPA5 3926 aa19.48■□□□□ 0.71
CLK3-225ENST00000569063 GFYI3L273 518 aa19.48■□□□□ 0.71
CLK3-225ENST00000569063 EIF3FO00303 357 aaPredicted RBP19.48■□□□□ 0.71
CLK3-225ENST00000569063 TTI1O43156 1089 aa19.48■□□□□ 0.71
CLK3-225ENST00000569063 SLC28A2O43868 658 aa19.48■□□□□ 0.71
CLK3-225ENST00000569063 VPS26AO75436 327 aa19.48■□□□□ 0.71
CLK3-225ENST00000569063 HSD17B2P37059 387 aa19.48■□□□□ 0.71
CLK3-225ENST00000569063 DCDP81605 110 aaKnown RBP19.48■□□□□ 0.71
CLK3-225ENST00000569063 NFKB2Q00653 900 aa19.48■□□□□ 0.71
CLK3-225ENST00000569063 KIAA0408Q6ZU52 694 aa19.48■□□□□ 0.71
CLK3-225ENST00000569063 GALNT7Q86SF2 657 aa19.48■□□□□ 0.71
CLK3-225ENST00000569063 SMPDL3AQ92484 453 aa19.48■□□□□ 0.71
CLK3-225ENST00000569063 LRRC39Q96DD0 335 aa19.48■□□□□ 0.71
CLK3-225ENST00000569063 ZNF285Q96NJ3 590 aa19.48■□□□□ 0.71
CLK3-225ENST00000569063 PKP4Q99569 1192 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms