RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 TAP2Q03519 686 aa17.15■□□□□ 0.34
HERC2-208ENST00000566635 RPE65Q16518 533 aa17.15■□□□□ 0.34
HERC2-208ENST00000566635 XKR7Q5GH72 579 aa17.15■□□□□ 0.34
HERC2-208ENST00000566635 FAM91A1Q658Y4 838 aa17.15■□□□□ 0.34
HERC2-208ENST00000566635 CAPN13Q6MZZ7 669 aaPredicted RBP17.15■□□□□ 0.34
HERC2-208ENST00000566635 ARMCX6Q7L4S7 300 aa17.15■□□□□ 0.34
HERC2-208ENST00000566635 EFL1Q7Z2Z2 1120 aaKnown RBP17.15■□□□□ 0.34
HERC2-208ENST00000566635 NRROSQ86YC3 692 aa17.15■□□□□ 0.34
HERC2-208ENST00000566635 TBC1D21Q8IYX1 336 aa17.15■□□□□ 0.34
HERC2-208ENST00000566635 PCED1AQ9H1Q7 454 aa17.15■□□□□ 0.34
HERC2-208ENST00000566635 TRIM33Q9UPN9 1127 aa17.15■□□□□ 0.34
HERC2-208ENST00000566635 RRP15Q9Y3B9 282 aaKnown RBP17.15■□□□□ 0.34
HERC2-208ENST00000566635 GON4LQ3T8J9 2241 aa17.15■□□□□ 0.34
HERC2-208ENST00000566635 KCNE1BA0A087WTH5 132 aa17.14■□□□□ 0.33
HERC2-208ENST00000566635 MAP3K13O43283 966 aa17.14■□□□□ 0.33
HERC2-208ENST00000566635 TNFP01375 233 aa17.14■□□□□ 0.33
HERC2-208ENST00000566635 AOC1P19801 751 aa17.14■□□□□ 0.33
HERC2-208ENST00000566635 HALP42357 657 aa17.14■□□□□ 0.33
HERC2-208ENST00000566635 CHIT1Q13231 466 aa17.14■□□□□ 0.33
HERC2-208ENST00000566635 ABRAXAS2Q15018 415 aa17.14■□□□□ 0.33
HERC2-208ENST00000566635 CPSF6Q16630 551 aaKnown RBP eCLIP17.14■□□□□ 0.33
HERC2-208ENST00000566635 METTL21CQ5VZV1 264 aa17.14■□□□□ 0.33
HERC2-208ENST00000566635 IL27RAQ6UWB1 636 aa17.14■□□□□ 0.33
HERC2-208ENST00000566635 SGPP1Q9BX95 441 aa17.14■□□□□ 0.33
HERC2-208ENST00000566635 ZNF385DQ9H6B1 395 aa17.14■□□□□ 0.33
HERC2-208ENST00000566635 FARSBQ9NSD9 589 aaKnown RBP17.14■□□□□ 0.33
HERC2-208ENST00000566635 TRNAU1APQ9NX07 287 aaKnown RBP17.14■□□□□ 0.33
HERC2-208ENST00000566635 A0A1W2PR77 199 aa17.14■□□□□ 0.33
HERC2-208ENST00000566635 ERGP11308 486 aa17.14■□□□□ 0.33
HERC2-208ENST00000566635 MTHFD1P11586 935 aaKnown RBP17.14■□□□□ 0.33
HERC2-208ENST00000566635 CD22P20273 847 aa17.14■□□□□ 0.33
HERC2-208ENST00000566635 MAGEA9P43362 315 aa17.14■□□□□ 0.33
HERC2-208ENST00000566635 SCTRP47872 440 aa17.14■□□□□ 0.33
HERC2-208ENST00000566635 FNTBP49356 437 aa17.14■□□□□ 0.33
HERC2-208ENST00000566635 NCALDP61601 193 aa17.14■□□□□ 0.33
HERC2-208ENST00000566635 TUBGCP3Q96CW5 907 aa17.14■□□□□ 0.33
HERC2-208ENST00000566635 CCDC177Q9NQR7 707 aaPredicted RBP17.14■□□□□ 0.33
HERC2-208ENST00000566635 A0A0C4DFX4 3053 aa17.13■□□□□ 0.33
HERC2-208ENST00000566635 CD1EP15812 388 aa17.13■□□□□ 0.33
HERC2-208ENST00000566635 CD38P28907 300 aa17.13■□□□□ 0.33
HERC2-208ENST00000566635 IRF8Q02556 426 aa17.13■□□□□ 0.33
HERC2-208ENST00000566635 KRT72Q14CN4 511 aa17.13■□□□□ 0.33
HERC2-208ENST00000566635 GGTA1PQ4G0N0 100 aa17.13■□□□□ 0.33
HERC2-208ENST00000566635 SGO1Q5FBB7 561 aa17.13■□□□□ 0.33
HERC2-208ENST00000566635 XKR6Q5GH73 641 aa17.13■□□□□ 0.33
HERC2-208ENST00000566635 SLC36A4Q6YBV0 504 aa17.13■□□□□ 0.33
HERC2-208ENST00000566635 NEIL2Q969S2 332 aa17.13■□□□□ 0.33
HERC2-208ENST00000566635 CAMK1GQ96NX5 476 aa17.13■□□□□ 0.33
HERC2-208ENST00000566635 SLC29A3Q9BZD2 475 aa17.13■□□□□ 0.33
HERC2-208ENST00000566635 XKR8Q9H6D3 395 aa17.13■□□□□ 0.33
HERC2-208ENST00000566635 TM9SF3Q9HD45 589 aa17.13■□□□□ 0.33
HERC2-208ENST00000566635 COPG1Q9Y678 874 aaKnown RBP17.13■□□□□ 0.33
HERC2-208ENST00000566635 A6NCN8 305 aa17.12■□□□□ 0.33
HERC2-208ENST00000566635 MANBAO00462 879 aa17.12■□□□□ 0.33
HERC2-208ENST00000566635 UNC5CO95185 931 aa17.12■□□□□ 0.33
HERC2-208ENST00000566635 ALDOCP09972 364 aaKnown RBP17.12■□□□□ 0.33
HERC2-208ENST00000566635 ILF3Q12906 894 aaKnown RBP eCLIP17.12■□□□□ 0.33
HERC2-208ENST00000566635 ABRAXAS1Q6UWZ7 409 aa17.12■□□□□ 0.33
HERC2-208ENST00000566635 MAMSTRQ6ZN01 415 aa17.12■□□□□ 0.33
HERC2-208ENST00000566635 CHSY3Q70JA7 882 aa17.12■□□□□ 0.33
HERC2-208ENST00000566635 PARGQ86W56 976 aa17.12■□□□□ 0.33
HERC2-208ENST00000566635 C10orf67Q8IYJ2 551 aa17.12■□□□□ 0.33
HERC2-208ENST00000566635 PHACTR4Q8IZ21 702 aa17.12■□□□□ 0.33
HERC2-208ENST00000566635 L3MBTL4Q8NA19 623 aa17.12■□□□□ 0.33
HERC2-208ENST00000566635 PTCD3Q96EY7 689 aaKnown RBP17.12■□□□□ 0.33
HERC2-208ENST00000566635 PRMT8Q9NR22 394 aaPredicted RBP17.12■□□□□ 0.33
HERC2-208ENST00000566635 TRBV23OR9-2A0A075B6M9 112 aa17.12■□□□□ 0.33
HERC2-208ENST00000566635 CLGNO14967 610 aa17.12■□□□□ 0.33
HERC2-208ENST00000566635 WFS1O76024 890 aa17.12■□□□□ 0.33
HERC2-208ENST00000566635 NPPBP16860 134 aa17.12■□□□□ 0.33
HERC2-208ENST00000566635 VARSP26640 1264 aaKnown RBP17.12■□□□□ 0.33
HERC2-208ENST00000566635 RACK1P63244 317 aaKnown RBP17.12■□□□□ 0.33
HERC2-208ENST00000566635 DOC2AQ14183 400 aa17.12■□□□□ 0.33
HERC2-208ENST00000566635 KRT33BQ14525 404 aa17.12■□□□□ 0.33
HERC2-208ENST00000566635 ZRSR2Q15696 482 aaKnown RBP17.12■□□□□ 0.33
HERC2-208ENST00000566635 CYP2A13Q16696 494 aa17.12■□□□□ 0.33
HERC2-208ENST00000566635 THEMIS2Q5TEJ8 643 aa17.12■□□□□ 0.33
HERC2-208ENST00000566635 TMPRSS11BQ86T26 416 aa17.12■□□□□ 0.33
HERC2-208ENST00000566635 MFSD2AQ8NA29 543 aa17.12■□□□□ 0.33
HERC2-208ENST00000566635 LINC01555Q8NAE3 123 aa17.12■□□□□ 0.33
HERC2-208ENST00000566635 OR52E1Q8NGJ3 308 aa17.12■□□□□ 0.33
HERC2-208ENST00000566635 FAM174AQ8TBP5 190 aa17.12■□□□□ 0.33
HERC2-208ENST00000566635 JPH3Q8WXH2 748 aaPredicted RBP17.12■□□□□ 0.33
HERC2-208ENST00000566635 MTFMTQ96DP5 389 aaKnown RBP17.12■□□□□ 0.33
HERC2-208ENST00000566635 TXLNGQ9NUQ3 528 aa17.12■□□□□ 0.33
HERC2-208ENST00000566635 SPATA7Q9P0W8 599 aa17.12■□□□□ 0.33
HERC2-208ENST00000566635 LNPEPQ9UIQ6 1025 aa17.12■□□□□ 0.33
HERC2-208ENST00000566635 CAPN7Q9Y6W3 813 aa17.12■□□□□ 0.33
HERC2-208ENST00000566635 LAMA1P25391 3075 aa17.12■□□□□ 0.33
HERC2-208ENST00000566635 TP53BP1Q12888 1972 aaPredicted RBP17.11■□□□□ 0.33
HERC2-208ENST00000566635 UBDO15205 165 aa17.11■□□□□ 0.33
HERC2-208ENST00000566635 PEX11AO75192 247 aa17.11■□□□□ 0.33
HERC2-208ENST00000566635 PRR35P0CG20 571 aa17.11■□□□□ 0.33
HERC2-208ENST00000566635 TDGF1P13385 188 aa17.11■□□□□ 0.33
HERC2-208ENST00000566635 CPA2P48052 419 aa17.11■□□□□ 0.33
HERC2-208ENST00000566635 KLF10Q13118 480 aa17.11■□□□□ 0.33
HERC2-208ENST00000566635 PRAMEF14Q5SWL7 426 aa17.11■□□□□ 0.33
HERC2-208ENST00000566635 PRAMEF13Q5VWM6 474 aa17.11■□□□□ 0.33
HERC2-208ENST00000566635 WASH2PQ6VEQ5 465 aa17.11■□□□□ 0.33
HERC2-208ENST00000566635 Q6ZSR9 355 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms