RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 HMGCLL1Q8TB92 370 aa19.38■□□□□ 0.69
CLN6-207ENST00000566347 ZUFSPQ96AP4 578 aa19.38■□□□□ 0.69
CLN6-207ENST00000566347 FER1L6-AS2Q96M78 137 aa19.38■□□□□ 0.69
CLN6-207ENST00000566347 BIRC8Q96P09 236 aa19.38■□□□□ 0.69
CLN6-207ENST00000566347 VPS9D1Q9Y2B5 631 aa19.38■□□□□ 0.69
CLN6-207ENST00000566347 DOPEY2Q9Y3R5 2298 aa19.38■□□□□ 0.69
CLN6-207ENST00000566347 RELNP78509 3460 aa19.37■□□□□ 0.69
CLN6-207ENST00000566347 TARM1B6A8C7 271 aa19.37■□□□□ 0.69
CLN6-207ENST00000566347 PEX12O00623 359 aa19.37■□□□□ 0.69
CLN6-207ENST00000566347 OGNP20774 298 aaKnown RBP19.37■□□□□ 0.69
CLN6-207ENST00000566347 FMO4P31512 558 aa19.37■□□□□ 0.69
CLN6-207ENST00000566347 NADK2Q4G0N4 442 aa19.37■□□□□ 0.69
CLN6-207ENST00000566347 MRPL14Q6P1L8 145 aaKnown RBP19.37■□□□□ 0.69
CLN6-207ENST00000566347 LMNTD1Q8N9Z9 388 aa19.37■□□□□ 0.69
CLN6-207ENST00000566347 PTERQ96BW5 349 aa19.37■□□□□ 0.69
CLN6-207ENST00000566347 NUDT9Q9BW91 350 aa19.37■□□□□ 0.69
CLN6-207ENST00000566347 SAMD15Q9P1V8 674 aa19.37■□□□□ 0.69
CLN6-207ENST00000566347 NFS1Q9Y697 457 aa19.37■□□□□ 0.69
CLN6-207ENST00000566347 ANKRD12Q6UB98 2062 aa19.37■□□□□ 0.69
CLN6-207ENST00000566347 CCDC88CQ9P219 2028 aa19.37■□□□□ 0.69
CLN6-207ENST00000566347 SPENQ96T58 3664 aaKnown RBP19.36■□□□□ 0.69
CLN6-207ENST00000566347 A0A1B0GX78 115 aa19.36■□□□□ 0.69
CLN6-207ENST00000566347 A6NL46 340 aa19.36■□□□□ 0.69
CLN6-207ENST00000566347 GOLGA8KD6RF30 607 aa19.36■□□□□ 0.69
CLN6-207ENST00000566347 GOLGA8TH3BQL2 631 aa19.36■□□□□ 0.69
CLN6-207ENST00000566347 PRICKLE3O43900 615 aaPredicted RBP19.36■□□□□ 0.69
CLN6-207ENST00000566347 KLHL41O60662 606 aa19.36■□□□□ 0.69
CLN6-207ENST00000566347 KRT14P02533 472 aa19.36■□□□□ 0.69
CLN6-207ENST00000566347 PIM1P11309 404 aaPredicted RBP19.36■□□□□ 0.69
CLN6-207ENST00000566347 ALAS2P22557 587 aa19.36■□□□□ 0.69
CLN6-207ENST00000566347 BDKRB1P46663 353 aa19.36■□□□□ 0.69
CLN6-207ENST00000566347 GCGRP47871 477 aa19.36■□□□□ 0.69
CLN6-207ENST00000566347 VPS41P49754 854 aa19.36■□□□□ 0.69
CLN6-207ENST00000566347 GRM7Q14831 915 aa19.36■□□□□ 0.69
CLN6-207ENST00000566347 FCRL6Q6DN72 434 aa19.36■□□□□ 0.69
CLN6-207ENST00000566347 CASC4Q6P4E1 433 aa19.36■□□□□ 0.69
CLN6-207ENST00000566347 CNSTQ6PJW8 725 aa19.36■□□□□ 0.69
CLN6-207ENST00000566347 TTLL10Q6ZVT0 673 aa19.36■□□□□ 0.69
CLN6-207ENST00000566347 CLEC1AQ8NC01 280 aa19.36■□□□□ 0.69
CLN6-207ENST00000566347 CPT1CQ8TCG5 803 aa19.36■□□□□ 0.69
CLN6-207ENST00000566347 FKBP10Q96AY3 582 aa19.36■□□□□ 0.69
CLN6-207ENST00000566347 PBKQ96KB5 322 aa19.36■□□□□ 0.69
CLN6-207ENST00000566347 SMAD5Q99717 465 aaKnown RBP19.36■□□□□ 0.69
CLN6-207ENST00000566347 SELENOSQ9BQE4 189 aa19.36■□□□□ 0.69
CLN6-207ENST00000566347 ENAMQ9NRM1 1142 aa19.36■□□□□ 0.69
CLN6-207ENST00000566347 SPATA7Q9P0W8 599 aa19.36■□□□□ 0.69
CLN6-207ENST00000566347 JRKLQ9Y4A0 524 aa19.36■□□□□ 0.69
CLN6-207ENST00000566347 KLK4Q9Y5K2 254 aa19.36■□□□□ 0.69
CLN6-207ENST00000566347 MAGEB16A2A368 324 aa19.35■□□□□ 0.69
CLN6-207ENST00000566347 CLEC18AA5D8T8 446 aa19.35■□□□□ 0.69
CLN6-207ENST00000566347 NIPSNAP2O75323 286 aa19.35■□□□□ 0.69
CLN6-207ENST00000566347 VPS4BO75351 444 aa19.35■□□□□ 0.69
CLN6-207ENST00000566347 AVILO75366 819 aa19.35■□□□□ 0.69
CLN6-207ENST00000566347 SORBS2O94875 1100 aaKnown RBP19.35■□□□□ 0.69
CLN6-207ENST00000566347 MATN4O95460 622 aa19.35■□□□□ 0.69
CLN6-207ENST00000566347 ATXN8OSP0DMR3 200 aa19.35■□□□□ 0.69
CLN6-207ENST00000566347 MLNP12872 115 aa19.35■□□□□ 0.69
CLN6-207ENST00000566347 CHRM3P20309 590 aa19.35■□□□□ 0.69
CLN6-207ENST00000566347 GRIA3P42263 894 aa19.35■□□□□ 0.69
CLN6-207ENST00000566347 TERF1P54274 439 aa19.35■□□□□ 0.69
CLN6-207ENST00000566347 GBX1Q14549 363 aa19.35■□□□□ 0.69
CLN6-207ENST00000566347 SLC9A5Q14940 896 aa19.35■□□□□ 0.69
CLN6-207ENST00000566347 NAA25Q14CX7 972 aa19.35■□□□□ 0.69
CLN6-207ENST00000566347 VWA5B1Q5TIE3 1220 aa19.35■□□□□ 0.69
CLN6-207ENST00000566347 NEPROQ6NW34 567 aa19.35■□□□□ 0.69
CLN6-207ENST00000566347 CLEC18BQ6UXF7 455 aa19.35■□□□□ 0.69
CLN6-207ENST00000566347 CILP2Q8IUL8 1156 aa19.35■□□□□ 0.69
CLN6-207ENST00000566347 RASGEF1CQ8N431 466 aa19.35■□□□□ 0.69
CLN6-207ENST00000566347 TTC29Q8NA56 475 aaPredicted RBP19.35■□□□□ 0.69
CLN6-207ENST00000566347 CLEC18CQ8NCF0 446 aa19.35■□□□□ 0.69
CLN6-207ENST00000566347 MAGOHBQ96A72 148 aaKnown RBP19.35■□□□□ 0.69
CLN6-207ENST00000566347 NACC2Q96BF6 587 aa19.35■□□□□ 0.69
CLN6-207ENST00000566347 ZNF285Q96NJ3 590 aa19.35■□□□□ 0.69
CLN6-207ENST00000566347 NAP1L3Q99457 506 aaPredicted RBP19.35■□□□□ 0.69
CLN6-207ENST00000566347 XAB2Q9HCS7 855 aaKnown RBP19.35■□□□□ 0.69
CLN6-207ENST00000566347 INTS10Q9NVR2 710 aaKnown RBP19.35■□□□□ 0.69
CLN6-207ENST00000566347 C5AR2Q9P296 337 aa19.35■□□□□ 0.69
CLN6-207ENST00000566347 VPS4AQ9UN37 437 aa19.35■□□□□ 0.69
CLN6-207ENST00000566347 RUVBL2Q9Y230 463 aaKnown RBP19.35■□□□□ 0.69
CLN6-207ENST00000566347 CRYL1Q9Y2S2 319 aa19.35■□□□□ 0.69
CLN6-207ENST00000566347 FAM169AQ9Y6X4 670 aa19.35■□□□□ 0.69
CLN6-207ENST00000566347 PRRC2CQ9Y520 2896 aaKnown RBP19.35■□□□□ 0.69
CLN6-207ENST00000566347 E5RI56 91 aa19.34■□□□□ 0.69
CLN6-207ENST00000566347 DSCR3O14972 297 aa19.34■□□□□ 0.69
CLN6-207ENST00000566347 SRPX2O60687 465 aaPredicted RBP19.34■□□□□ 0.69
CLN6-207ENST00000566347 CNOT3O75175 753 aaKnown RBP19.34■□□□□ 0.69
CLN6-207ENST00000566347 ONECUT2O95948 504 aa19.34■□□□□ 0.69
CLN6-207ENST00000566347 ALBP02768 609 aa19.34■□□□□ 0.69
CLN6-207ENST00000566347 FAM214AQ32MH5 1076 aa19.34■□□□□ 0.69
CLN6-207ENST00000566347 CCSMST1Q4G0I0 132 aa19.34■□□□□ 0.69
CLN6-207ENST00000566347 DCAF10Q5QP82 559 aa19.34■□□□□ 0.69
CLN6-207ENST00000566347 JMJD6Q6NYC1 403 aaPredicted RBP19.34■□□□□ 0.69
CLN6-207ENST00000566347 TTC27Q6P3X3 843 aa19.34■□□□□ 0.69
CLN6-207ENST00000566347 CAND1Q86VP6 1230 aaKnown RBP19.34■□□□□ 0.69
CLN6-207ENST00000566347 FAM26EQ8N5C1 309 aa19.34■□□□□ 0.69
CLN6-207ENST00000566347 GALNT11Q8NCW6 608 aa19.34■□□□□ 0.69
CLN6-207ENST00000566347 MCUQ8NE86 351 aa19.34■□□□□ 0.69
CLN6-207ENST00000566347 WDR54Q9H977 334 aa19.34■□□□□ 0.69
CLN6-207ENST00000566347 CUTCQ9NTM9 273 aa19.34■□□□□ 0.69
CLN6-207ENST00000566347 P4HTMQ9NXG6 502 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms