RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 VWA3BQ502W6 1294 aa9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 CCDC38Q502W7 563 aa9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 FIGNQ5HY92 759 aa9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 ZC3H12BQ5HYM0 836 aaKnown RBP9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 ZNF648Q5T619 568 aaPredicted RBP9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 ACAD10Q6JQN1 1059 aa9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 LAPTM4BQ86VI4 370 aa9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 RAVER1Q8IY67 606 aaKnown RBP9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 ZNF454Q8N9F8 522 aa9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 OR4E2Q8NGC2 313 aa9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 RHNO1Q9BSD3 238 aa9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 RBM4Q9BWF3 364 aaKnown RBP9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 NAA15Q9BXJ9 866 aaKnown RBP9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 ZDHHC11Q9H8X9 412 aa9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 MAGEF1Q9HAY2 307 aa9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 ARFGAP3Q9NP61 516 aa9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 IMP3Q9NV31 184 aaKnown RBP9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 ARL15Q9NXU5 204 aa9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 KIAA1468Q9P260 1216 aa9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 OR12D3Q9UGF7 316 aa9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 KLF13Q9Y2Y9 288 aaPredicted RBP9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 FRAS1Q86XX4 4008 aa9.97□□□□□ -0.81
HDGFL3-204ENST00000563790 DNAH9Q9NYC9 4486 aa9.96□□□□□ -0.81
HDGFL3-204ENST00000563790 IGLV3-12A0A075B6K2 115 aa9.96□□□□□ -0.82
HDGFL3-204ENST00000563790 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.96□□□□□ -0.82
HDGFL3-204ENST00000563790 GTPBP10A4D1E9 387 aaKnown RBP9.96□□□□□ -0.82
HDGFL3-204ENST00000563790 PDXKO00764 312 aa9.96□□□□□ -0.82
HDGFL3-204ENST00000563790 POLR2DO15514 142 aaKnown RBP9.96□□□□□ -0.82
HDGFL3-204ENST00000563790 YEATS4O95619 227 aa9.96□□□□□ -0.82
HDGFL3-204ENST00000563790 CRYGSP22914 178 aa9.96□□□□□ -0.82
HDGFL3-204ENST00000563790 LOXP28300 417 aaPredicted RBP9.96□□□□□ -0.82
HDGFL3-204ENST00000563790 GTF2H1P32780 548 aa9.96□□□□□ -0.82
HDGFL3-204ENST00000563790 ZNF136P52737 540 aa9.96□□□□□ -0.82
HDGFL3-204ENST00000563790 EMP2P54851 167 aa9.96□□□□□ -0.82
HDGFL3-204ENST00000563790 RPS4XP62701 263 aaKnown RBP9.96□□□□□ -0.82
HDGFL3-204ENST00000563790 MEA1Q16626 185 aa9.96□□□□□ -0.82
HDGFL3-204ENST00000563790 ZNF468Q5VIY5 522 aaPredicted RBP9.96□□□□□ -0.82
HDGFL3-204ENST00000563790 PLAG1Q6DJT9 500 aa9.96□□□□□ -0.82
HDGFL3-204ENST00000563790 DENND1BQ6P3S1 775 aa9.96□□□□□ -0.82
HDGFL3-204ENST00000563790 INTS8Q75QN2 995 aaKnown RBP9.96□□□□□ -0.82
HDGFL3-204ENST00000563790 SULF2Q8IWU5 870 aa9.96□□□□□ -0.82
HDGFL3-204ENST00000563790 TNIP2Q8NFZ5 429 aa9.96□□□□□ -0.82
HDGFL3-204ENST00000563790 MARK4Q96L34 752 aa9.96□□□□□ -0.82
HDGFL3-204ENST00000563790 CNPPD1Q9BV87 410 aa9.96□□□□□ -0.82
HDGFL3-204ENST00000563790 ASB8Q9H765 288 aa9.96□□□□□ -0.82
HDGFL3-204ENST00000563790 TRIM45Q9H8W5 580 aaPredicted RBP9.96□□□□□ -0.82
HDGFL3-204ENST00000563790 ZNF282Q9UDV7 671 aaPredicted RBP9.96□□□□□ -0.82
HDGFL3-204ENST00000563790 TRAF3IP3Q9Y228 551 aa9.96□□□□□ -0.82
HDGFL3-204ENST00000563790 FRMD4BQ9Y2L6 1034 aa9.96□□□□□ -0.82
HDGFL3-204ENST00000563790 A0A1B0GVC2 190 aa9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 EEF1E1-BLOC1S5C9J1V9 151 aa9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 EEF1E1O43324 174 aaKnown RBP9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 IGHV4-39P01824 125 aa9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 IGHG3P01860 377 aa9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 NEFLP07196 543 aa9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 GZMKP49863 264 aa9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 SULT1E1P49888 294 aa9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 MXI1P50539 228 aa9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 SCNN1BP51168 640 aa9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 DSC2Q02487 901 aa9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 PDCLQ13371 301 aa9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 STK38Q15208 465 aa9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 NFIL3Q16649 462 aa9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 PARP15Q460N3 678 aa9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 ZCWPW2Q504Y3 356 aa9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 RESP18Q5W5W9 173 aa9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 OLFML1Q6UWY5 402 aa9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 SLC26A9Q7LBE3 791 aa9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 C1QL4Q86Z23 238 aa9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 ZNF611Q8N823 705 aa9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 NTNG2Q96CW9 530 aa9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 WWC2-AS2Q96NR7 200 aa9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 QRFPRQ96P65 431 aa9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 ZFYVE21Q9BQ24 234 aa9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 WDR83Q9BRX9 315 aaKnown RBP9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 GALNT8Q9NY28 637 aa9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 ACAD8Q9UKU7 415 aa9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 PSMD13Q9UNM6 376 aa9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 CFAP20Q9Y6A4 193 aaKnown RBP9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 SCN3AQ9NY46 2000 aa9.95□□□□□ -0.82
HDGFL3-204ENST00000563790 TRIM77I1YAP6 450 aa9.94□□□□□ -0.82
HDGFL3-204ENST00000563790 J3KR12 359 aa9.94□□□□□ -0.82
HDGFL3-204ENST00000563790 AQP7O14520 342 aa9.94□□□□□ -0.82
HDGFL3-204ENST00000563790 PRAMEF11O60813 436 aa9.94□□□□□ -0.82
HDGFL3-204ENST00000563790 WLSQ5T9L3 541 aa9.94□□□□□ -0.82
HDGFL3-204ENST00000563790 YOD1Q5VVQ6 348 aaPredicted RBP9.94□□□□□ -0.82
HDGFL3-204ENST00000563790 CAND1Q86VP6 1230 aaKnown RBP9.94□□□□□ -0.82
HDGFL3-204ENST00000563790 DNAJC22Q8N4W6 341 aa9.94□□□□□ -0.82
HDGFL3-204ENST00000563790 OR10H5Q8NGA6 315 aa9.94□□□□□ -0.82
HDGFL3-204ENST00000563790 TBCBQ99426 244 aa9.94□□□□□ -0.82
HDGFL3-204ENST00000563790 RBM24Q9BX46 236 aaKnown RBP9.94□□□□□ -0.82
HDGFL3-204ENST00000563790 CUTCQ9NTM9 273 aa9.94□□□□□ -0.82
HDGFL3-204ENST00000563790 ZNF226Q9NYT6 803 aa9.94□□□□□ -0.82
HDGFL3-204ENST00000563790 STAP1Q9ULZ2 295 aa9.94□□□□□ -0.82
HDGFL3-204ENST00000563790 PCDHA7Q9UN72 937 aa9.94□□□□□ -0.82
HDGFL3-204ENST00000563790 PLCL2Q9UPR0 1127 aa9.94□□□□□ -0.82
HDGFL3-204ENST00000563790 PTGDR2Q9Y5Y4 395 aa9.94□□□□□ -0.82
HDGFL3-204ENST00000563790 LOC100289279A0A1B0GTE1 492 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms