RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 TRIM33Q9UPN9 1127 aa21.28■■□□□ 1
LINC01960-201ENST00000563759 RNF11Q9Y3C5 154 aa21.28■■□□□ 1
LINC01960-201ENST00000563759 PTGDR2Q9Y5Y4 395 aa21.28■■□□□ 1
LINC01960-201ENST00000563759 ZNF839A8K0R7 811 aa21.28■■□□□ 1
LINC01960-201ENST00000563759 E7ENX8 843 aa21.28■■□□□ 1
LINC01960-201ENST00000563759 TLR4O00206 839 aa21.28■■□□□ 1
LINC01960-201ENST00000563759 EML2O95834 649 aa21.28■■□□□ 1
LINC01960-201ENST00000563759 F3P13726 295 aa21.28■■□□□ 1
LINC01960-201ENST00000563759 JUNDP17535 347 aa21.28■■□□□ 1
LINC01960-201ENST00000563759 NCF2P19878 526 aaPredicted RBP21.28■■□□□ 1
LINC01960-201ENST00000563759 HSD17B2P37059 387 aa21.28■■□□□ 1
LINC01960-201ENST00000563759 TAP2Q03519 686 aa21.28■■□□□ 1
LINC01960-201ENST00000563759 FASTKQ14296 549 aaKnown RBP21.28■■□□□ 1
LINC01960-201ENST00000563759 ARHGAP19Q14CB8 494 aa21.28■■□□□ 1
LINC01960-201ENST00000563759 TCHHL1Q5QJ38 904 aaPredicted RBP21.28■■□□□ 1
LINC01960-201ENST00000563759 THEMIS2Q5TEJ8 643 aa21.28■■□□□ 1
LINC01960-201ENST00000563759 LONP2Q86WA8 852 aa21.28■■□□□ 1
LINC01960-201ENST00000563759 DNASE2BQ8WZ79 361 aa21.28■■□□□ 1
LINC01960-201ENST00000563759 OR4K3Q96R72 315 aa21.28■■□□□ 1
LINC01960-201ENST00000563759 CCDC28BQ9BUN5 200 aa21.28■■□□□ 1
LINC01960-201ENST00000563759 CAAP1Q9H8G2 361 aa21.28■■□□□ 1
LINC01960-201ENST00000563759 PFDN4Q9NQP4 134 aa21.28■■□□□ 1
LINC01960-201ENST00000563759 COLEC10Q9Y6Z7 277 aa21.28■■□□□ 1
LINC01960-201ENST00000563759 DNAH14Q0VDD8 3507 aa21.28■■□□□ 1
LINC01960-201ENST00000563759 PI4KAP42356 2102 aa21.27■■□□□ 1
LINC01960-201ENST00000563759 A0A0C4DFX4 3053 aa21.27■■□□□ 1
LINC01960-201ENST00000563759 ATP6AP2A0A1C7CYW4 349 aa21.27■■□□□ 1
LINC01960-201ENST00000563759 FFAR3O14843 346 aa21.27■■□□□ 1
LINC01960-201ENST00000563759 GPR42O15529 346 aa21.27■■□□□ 1
LINC01960-201ENST00000563759 ATP6AP2O75787 350 aa21.27■■□□□ 1
LINC01960-201ENST00000563759 LINC00032P0C843 101 aa21.27■■□□□ 1
LINC01960-201ENST00000563759 CCND1P24385 295 aa21.27■■□□□ 1
LINC01960-201ENST00000563759 SUSD1Q6UWL2 747 aa21.27■■□□□ 1
LINC01960-201ENST00000563759 CHCHD4Q8N4Q1 142 aa21.27■■□□□ 1
LINC01960-201ENST00000563759 TMEM105Q8N8V8 129 aa21.27■■□□□ 1
LINC01960-201ENST00000563759 LMNTD1Q8N9Z9 388 aa21.27■■□□□ 1
LINC01960-201ENST00000563759 CEP70Q8NHQ1 597 aa21.27■■□□□ 1
LINC01960-201ENST00000563759 TMEM131Q92545 1883 aa21.27■■□□□ 1
LINC01960-201ENST00000563759 CAMK1GQ96NX5 476 aa21.27■■□□□ 1
LINC01960-201ENST00000563759 TUBB1Q9H4B7 451 aa21.27■■□□□ 1
LINC01960-201ENST00000563759 KCNE2Q9Y6J6 123 aa21.27■■□□□ 1
LINC01960-201ENST00000563759 E7EQ34 232 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 CLGNO14967 610 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 KDM1AO60341 852 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 UBOX5O94941 541 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 ERGP11308 486 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 GNAZP19086 355 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 IRF8Q02556 426 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 CHIT1Q13231 466 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 PRRT3Q5FWE3 981 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 SPDYAQ5MJ70 313 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 TAF8Q7Z7C8 310 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 C1orf216Q8TAB5 229 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 CXorf40BQ96DE9 158 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 PRR11Q96HE9 360 aaPredicted RBP21.26■□□□□ 0.99
LINC01960-201ENST00000563759 SGPP1Q9BX95 441 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 RAB11FIP5Q9BXF6 653 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 SLC29A3Q9BZD2 475 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 ARMCX1Q9P291 453 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 DYRK1BQ9Y463 629 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 SNRNP200O75643 2136 aaKnown RBP21.26■□□□□ 0.99
LINC01960-201ENST00000563759 HEATR5BQ9P2D3 2071 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 BCAT2O15382 392 aaPredicted RBP21.26■□□□□ 0.99
LINC01960-201ENST00000563759 NDUFS1P28331 727 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 AFF3P51826 1226 aaKnown RBP21.26■□□□□ 0.99
LINC01960-201ENST00000563759 CPSF6Q16630 551 aaKnown RBP eCLIP21.26■□□□□ 0.99
LINC01960-201ENST00000563759 GGTA1PQ4G0N0 100 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 XKR6Q5GH73 641 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 METTL21CQ5VZV1 264 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 IL27RAQ6UWB1 636 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 LRRC56Q8IYG6 542 aaPredicted RBP21.26■□□□□ 0.99
LINC01960-201ENST00000563759 C2orf73Q8N5S3 287 aaPredicted RBP21.26■□□□□ 0.99
LINC01960-201ENST00000563759 ACTRT2Q8TDY3 377 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 MAGEB10Q96LZ2 347 aaPredicted RBP21.26■□□□□ 0.99
LINC01960-201ENST00000563759 C3orf30Q96M34 536 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 MIPEPQ99797 713 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 LRRC61Q9BV99 259 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 GPRC5BQ9NZH0 403 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 TAAR2Q9P1P5 351 aa21.26■□□□□ 0.99
LINC01960-201ENST00000563759 ATXN2Q99700 1313 aaKnown RBP21.25■□□□□ 0.99
LINC01960-201ENST00000563759 A6NCN8 305 aa21.25■□□□□ 0.99
LINC01960-201ENST00000563759 CSF2P04141 144 aa21.25■□□□□ 0.99
LINC01960-201ENST00000563759 NME1P15531 152 aaKnown RBP21.25■□□□□ 0.99
LINC01960-201ENST00000563759 DHPSP49366 369 aaPredicted RBP21.25■□□□□ 0.99
LINC01960-201ENST00000563759 RAB28P51157 221 aa21.25■□□□□ 0.99
LINC01960-201ENST00000563759 C21orf59P57076 290 aa21.25■□□□□ 0.99
LINC01960-201ENST00000563759 CYP2A13Q16696 494 aa21.25■□□□□ 0.99
LINC01960-201ENST00000563759 PRAMEF14Q5SWL7 426 aa21.25■□□□□ 0.99
LINC01960-201ENST00000563759 PRAMEF13Q5VWM6 474 aa21.25■□□□□ 0.99
LINC01960-201ENST00000563759 LYSMD4Q5XG99 296 aa21.25■□□□□ 0.99
LINC01960-201ENST00000563759 SCIMPQ6UWF3 145 aa21.25■□□□□ 0.99
LINC01960-201ENST00000563759 YTHDF3Q7Z739 585 aaKnown RBP21.25■□□□□ 0.99
LINC01960-201ENST00000563759 C11orf74Q86VG3 221 aa21.25■□□□□ 0.99
LINC01960-201ENST00000563759 HOMEZQ8IX15 550 aa21.25■□□□□ 0.99
LINC01960-201ENST00000563759 MAML2Q8IZL2 1156 aaPredicted RBP21.25■□□□□ 0.99
LINC01960-201ENST00000563759 OR52E1Q8NGJ3 308 aa21.25■□□□□ 0.99
LINC01960-201ENST00000563759 TUBGCP3Q96CW5 907 aa21.25■□□□□ 0.99
LINC01960-201ENST00000563759 CCT7Q99832 543 aa21.25■□□□□ 0.99
LINC01960-201ENST00000563759 MENTQ9BUN1 341 aa21.25■□□□□ 0.99
LINC01960-201ENST00000563759 CACNA1EQ15878 2313 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms