RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	PPP6C	O00743	305 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	AZIN1	O14977	448 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	CHUK	O15111	745 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	KLHL41	O60662	606 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	HNRNPCL1	O60812	293 aa	Known RBP	7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	PSIP1	O75475	530 aa	Known RBP	7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	DNAJC8	O75937	253 aa	Predicted RBP	7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	CBX6	O95503	412 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	ESRRB	O95718	433 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	CAT	P04040	527 aa	Known RBP	7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	ANXA5	P08758	320 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	TBC1D3H	P0C7X1	549 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	T-ENOL	P0DO92	83 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	UROS	P10746	265 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	GNS	P15586	552 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	GABRG2	P18507	467 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	PRDX3	P30048	256 aa	Known RBP	7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	IGFALS	P35858	605 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	GGT5	P36269	586 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	SLC6A12	P48065	614 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	HSPA7	P48741	367 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	RPIA	P49247	311 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	HNMT	P50135	292 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	FOXA1	P55317	472 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	AP1S2	P56377	157 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	PPP2CB	P62714	309 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	PPP2CA	P67775	309 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	PLOD1	Q02809	727 aa	Predicted RBP	7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	CYP4F3	Q08477	520 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	CDC16	Q13042	620 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	GTF2H2	Q13888	395 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	UBAP2L	Q14157	1087 aa	Known RBP	7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	INPP5A	Q14642	412 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	LSM12	Q3MHD2	195 aa	Known RBP	7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	UGT3A2	Q3SY77	523 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	METTL21C	Q5VZV1	264 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	TBC1D3G	Q6DHY5	549 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	TBC1D3C	Q6IPX1	549 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	GTF2H2C	Q6P1K8	395 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	TTC23L	Q6PF05	361 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	DOK6	Q6PKX4	331 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	CRTC3	Q6UUV7	619 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	SLC36A4	Q6YBV0	504 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	LRRC70	Q7Z2Q7	622 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	GOLGA7	Q7Z5G4	137 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	C11orf96	Q7Z7L8	435 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	SYVN1	Q86TM6	617 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	LRRTM4	Q86VH4	590 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	TRIM69	Q86WT6	500 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	TREML1	Q86YW5	311 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	TBC1D3	Q8IZP1	549 aa	Predicted RBP	7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	CLYBL	Q8N0X4	340 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	TEX9	Q8N6V9	391 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	FRMD1	Q8N878	549 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	LSM14A	Q8ND56	463 aa	Known RBP	7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	OR2L2	Q8NH16	312 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	MCOLN3	Q8TDD5	553 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	TWIST2	Q8WVJ9	160 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	HMGB4	Q8WW32	186 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	KLK6	Q92876	244 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	ESAM	Q96AP7	390 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	C19orf60	Q96EN9	201 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	PPP1R36	Q96LQ0	422 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	KCNA7	Q96RP8	456 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	HGH1	Q9BTY7	390 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	TUBB6	Q9BUF5	446 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	LGR4	Q9BXB1	951 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	TRIM54	Q9BYV2	358 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	ZNF385D	Q9H6B1	395 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	WDR55	Q9H6Y2	383 aa	Predicted RBP	7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	CD93	Q9NPY3	652 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	PHPT1	Q9NRX4	125 aa	Predicted RBP	7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	ARL15	Q9NXU5	204 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	OPTC	Q9UBM4	332 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	FAM8A1	Q9UBU6	413 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	SUSD2	Q9UGT4	822 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	ZNF225	Q9UK10	706 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	TRIM33	Q9UPN9	1127 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	STK38L	Q9Y2H1	464 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	TMEM98	Q9Y2Y6	226 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	FIS1	Q9Y3D6	152 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	ST14	Q9Y5Y6	855 aa		7.32	□□□□□ -1.24
TPM1-231	ENST00000561395	KLHL33	A6NCF5	533 aa		7.31	□□□□□ -1.24
TPM1-231	ENST00000561395	PABPN1L	A6NDY0	278 aa	Known RBP	7.31	□□□□□ -1.24
TPM1-231	ENST00000561395	MGAT4D	A6NG13	374 aa		7.31	□□□□□ -1.24
TPM1-231	ENST00000561395	LRRC72	A6NJI9	287 aa		7.31	□□□□□ -1.24
TPM1-231	ENST00000561395	C10orf142	B7Z368	130 aa		7.31	□□□□□ -1.24
TPM1-231	ENST00000561395	GPR89A	B7ZAQ6	455 aa		7.31	□□□□□ -1.24
TPM1-231	ENST00000561395		H3BM21	787 aa		7.31	□□□□□ -1.24
TPM1-231	ENST00000561395	OR7A17	O14581	309 aa		7.31	□□□□□ -1.24
TPM1-231	ENST00000561395	PIP5K1B	O14986	540 aa		7.31	□□□□□ -1.24
TPM1-231	ENST00000561395	CCNT2	O60583	730 aa	Known RBP	7.31	□□□□□ -1.24
TPM1-231	ENST00000561395	CRCP	O75575	148 aa		7.31	□□□□□ -1.24
TPM1-231	ENST00000561395	STK16	O75716	305 aa		7.31	□□□□□ -1.24
TPM1-231	ENST00000561395	POP7	O75817	140 aa	Known RBP	7.31	□□□□□ -1.24
TPM1-231	ENST00000561395	PAK4	O96013	591 aa	Predicted RBP	7.31	□□□□□ -1.24
TPM1-231	ENST00000561395	OTC	P00480	354 aa		7.31	□□□□□ -1.24
TPM1-231	ENST00000561395	IGLV3-19	P01714	112 aa		7.31	□□□□□ -1.24
TPM1-231	ENST00000561395	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	7.31	□□□□□ -1.24

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