RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 CSMD1Q96PZ7 3565 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 SYCE3A1L190 88 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 AGAP14A8MT82 685 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 KRT38O76015 456 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 KLHL18O94889 574 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 AP2A2O94973 939 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 UNC5CO95185 931 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 AP2A1O95782 977 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 ALBP02768 609 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 EIF2S1P05198 315 aaKnown RBP10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 PTMAP06454 111 aaKnown RBP10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 OR56A5P0C7T3 313 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 PTGER4P35408 488 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 NSG1P42857 185 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 VSX2P58304 361 aaPredicted RBP10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 SRSF11Q05519 484 aaKnown RBP10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 RBPJQ06330 500 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 CACNG1Q06432 222 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 SF1Q15637 639 aaKnown RBP10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 DBN1Q16643 649 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 ZC3H12BQ5HYM0 836 aaKnown RBP10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 ANKRD20A2Q5SQ80 823 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 ANKRD20A1Q5TYW2 823 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 ANKRD20A3Q5VUR7 823 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 CNSTQ6PJW8 725 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 IGFL2Q6UWQ7 119 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 RANBP10Q6VN20 620 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 ARHGEF18Q6ZSZ5 1173 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 NLRP9Q7RTR0 991 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 KBTBD2Q8IY47 623 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 RCOR2Q8IZ40 523 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 SIRT6Q8N6T7 355 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 OR11G2Q8NGC1 345 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 SUN3Q8TAQ9 357 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 ITLN2Q8WWU7 325 aaPredicted RBP10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 NR4A3Q92570 626 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 SLC22A18Q96BI1 424 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 MIEF2Q96C03 454 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 C8orf44Q96CB5 159 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 CCDC120Q96HB5 630 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 SPSB2Q99619 263 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 FAM118BQ9BPY3 351 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 CHRNA10Q9GZZ6 450 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 GOLPH3Q9H4A6 298 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 CHST11Q9NPF2 352 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 SLC39A10Q9ULF5 831 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 FAM169AQ9Y6X4 670 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 F8P00451 2351 aa10.05□□□□□ -0.8
CDC42BPB-207ENST00000560492 CELSR1Q9NYQ6 3014 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 IGLV3-16A0A075B6K0 115 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 NSG1A0A0A6YYJ2 146 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 TRAV17A0A0B4J275 112 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 F8W8V4 182 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 APOC4-APOC2K7ER74 178 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 WFS1O76024 890 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 USP1O94782 785 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 HPP00738 406 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 APOC2P02655 101 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 RPN2P04844 631 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 ERVK-10P10266 1014 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 ESRRAP11474 423 aaPredicted RBP10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 TPH1P17752 444 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 CXCR2P25025 360 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 MSNP26038 577 aaKnown RBP10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 PEBP1P30086 187 aaKnown RBP10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 ADRA1AP35348 466 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 CARSP49589 748 aaKnown RBP10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 RAB28P51157 221 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 EIF3EP60228 445 aaKnown RBP10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 COPS2P61201 443 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 EEF1A2Q05639 463 aaKnown RBP10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 Q0VFX4 171 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 TRIM14Q14142 442 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 POU6F1Q14863 301 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 FAM214AQ32MH5 1076 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 TCTE1Q5JU00 501 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 FAAH2Q6GMR7 532 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 MTFR2Q6P444 385 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 FIGLAQ6QHK4 219 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 BNC2Q6ZN30 1099 aaPredicted RBP10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 COX15Q7KZN9 410 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 ZNF808Q8N4W9 903 aaPredicted RBP10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 LMNTD1Q8N9Z9 388 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 FLVCR1-AS1Q8TAF5 88 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 GSDMBQ8TAX9 411 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 BRIX1Q8TDN6 353 aaKnown RBP10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 RELTQ969Z4 430 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 IL17FQ96PD4 163 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 PPP1R2P1Q96PQ5 205 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 LMF1Q96S06 567 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 CHP1Q99653 195 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 GORASP1Q9BQQ3 440 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 NHEJ1Q9H9Q4 299 aaPredicted RBP10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 ZNF304Q9HCX3 659 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 NLE1Q9NVX2 485 aaPredicted RBP10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 PIH1D1Q9NWS0 290 aaKnown RBP10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 SEC14L3Q9UDX4 400 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 C3orf18Q9UK00 162 aa10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 KLF2Q9Y5W3 355 aaPredicted RBP10.04□□□□□ -0.8
CDC42BPB-207ENST00000560492 PRSS21Q9Y6M0 314 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms