RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 MIEF2Q96C03 454 aa8.54□□□□□ -1.04
SNRPA1-208ENST00000559686 DCUN1D1Q96GG9 259 aa8.54□□□□□ -1.04
SNRPA1-208ENST00000559686 ZNF830Q96NB3 372 aaPredicted RBP8.54□□□□□ -1.04
SNRPA1-208ENST00000559686 SIGLEC12Q96PQ1 595 aa8.54□□□□□ -1.04
SNRPA1-208ENST00000559686 POLDIP3Q9BY77 421 aaKnown RBP8.54□□□□□ -1.04
SNRPA1-208ENST00000559686 XPO4Q9C0E2 1151 aaKnown RBP8.54□□□□□ -1.04
SNRPA1-208ENST00000559686 SLC25A51Q9H1U9 297 aa8.54□□□□□ -1.04
SNRPA1-208ENST00000559686 SLC26A1Q9H2B4 701 aa8.54□□□□□ -1.04
SNRPA1-208ENST00000559686 OR52A5Q9H2C5 316 aa8.54□□□□□ -1.04
SNRPA1-208ENST00000559686 ASB8Q9H765 288 aa8.54□□□□□ -1.04
SNRPA1-208ENST00000559686 MRPL47Q9HD33 250 aaKnown RBP8.54□□□□□ -1.04
SNRPA1-208ENST00000559686 STMN3Q9NZ72 180 aa8.54□□□□□ -1.04
SNRPA1-208ENST00000559686 IL17CQ9P0M4 197 aa8.54□□□□□ -1.04
SNRPA1-208ENST00000559686 CIDEBQ9UHD4 219 aa8.54□□□□□ -1.04
SNRPA1-208ENST00000559686 ST6GALNAC2Q9UJ37 374 aa8.54□□□□□ -1.04
SNRPA1-208ENST00000559686 NXT1Q9UKK6 140 aaKnown RBP8.54□□□□□ -1.04
SNRPA1-208ENST00000559686 FLNAP21333 2647 aaKnown RBP8.54□□□□□ -1.04
SNRPA1-208ENST00000559686 FBN1P35555 2871 aaKnown RBP8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 VSTM2BA6NLU5 285 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 E9PLN8 166 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 PRRG2O14669 202 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 ADAM10O14672 748 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 STX7O15400 261 aaKnown RBP8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 TTI1O43156 1089 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 ASNA1O43681 348 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 MED26O95402 600 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 MLYCDO95822 493 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 TSPAN12O95859 305 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 ZGLP1P0C6A0 271 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 MYBL2P10244 700 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 FOSL1P15407 271 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 DNASE1P24855 282 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 CXCR2P25025 360 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 PEBP1P30086 187 aaKnown RBP8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 SHMT2P34897 504 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 CARSP49589 748 aaKnown RBP8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 ARSEP51690 589 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 EMP2P54851 167 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 UBXN1Q04323 297 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 SNTB1Q13884 538 aaKnown RBP8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 BOP1Q14137 746 aaKnown RBP8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 ZDHHC20Q5W0Z9 365 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 BIVMQ86UB2 503 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 DMRTC2Q8IXT2 367 aaPredicted RBP8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 PQLC3Q8N755 202 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 TTC29Q8NA56 475 aaPredicted RBP8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 WFDC11Q8NEX6 87 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 FLVCR1-AS1Q8TAF5 88 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 THAP3Q8WTV1 239 aaPredicted RBP8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 PHF10Q8WUB8 498 aaKnown RBP8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 DMRTA2Q96SC8 542 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 VKORC1Q9BQB6 163 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 SYT11Q9BT88 431 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 MVB12BQ9H7P6 319 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 GLOD4Q9HC38 313 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 ZNF304Q9HCX3 659 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 LRFN1Q9P244 771 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 FKBPLQ9UIM3 349 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 CRLS1Q9UJA2 301 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 ANAPC7Q9UJX3 599 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 ARL5AQ9Y689 179 aa8.53□□□□□ -1.04
SNRPA1-208ENST00000559686 HRNRQ86YZ3 2850 aaPredicted RBP8.52□□□□□ -1.04
SNRPA1-208ENST00000559686 IGHV1-45A0A0A0MS14 117 aa8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 PROM1O43490 865 aa8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 TPOP07202 933 aa8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 CCDC172P0C7W6 258 aa8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 RALBP11234 206 aa8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 IGFBP2P18065 325 aa8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 FBLP22087 321 aaKnown RBP8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 FDXRP22570 491 aa8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 TNNT3P45378 269 aaPredicted RBP8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 WNT3AP56704 352 aa8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 VSX2P58304 361 aaPredicted RBP8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 PPIDQ08752 370 aaKnown RBP8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 PIGHQ14442 188 aaPredicted RBP8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 GRM7Q14831 915 aa8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 HADHQ16836 314 aaKnown RBP8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 KRTCAP3Q53RY4 240 aa8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 ATG9BQ674R7 924 aa8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 PPP1R2P3Q6NXS1 205 aa8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 ZNF449Q6P9G9 518 aa8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 NPNTQ6UXI9 565 aa8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 NAPRTQ6XQN6 538 aa8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 ZNF662Q6ZS27 426 aa8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 ZNF571Q7Z3V5 609 aaPredicted RBP8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 CD163Q86VB7 1156 aa8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 CCDC71Q8IV32 467 aaPredicted RBP8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 BEST3Q8N1M1 668 aa8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 MARVELD2Q8N4S9 558 aa8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 IPMKQ8NFU5 416 aa8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 NINJ1Q92982 152 aa8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 TADA1Q96BN2 335 aa8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 LINC00615Q96LM1 132 aaPredicted RBP8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 SRPK1Q96SB4 655 aaKnown RBP8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 SELENOSQ9BQE4 189 aa8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 GPATCH1Q9BRR8 931 aaKnown RBP8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 TRABDQ9H4I3 376 aa8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 HAUS4Q9H6D7 363 aa8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 KCNJ16Q9NPI9 418 aa8.52□□□□□ -1.05
SNRPA1-208ENST00000559686 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms