RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 CYP4F3Q08477 520 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 OTUD3Q5T2D3 398 aaPredicted RBP10.26□□□□□ -0.77
TPM1-210ENST00000558264 FRG2Q64ET8 278 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 AGTRAPQ6RW13 159 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 CFAP206Q8IYR0 622 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 SPDYE1Q8NFV5 336 aaPredicted RBP10.26□□□□□ -0.77
TPM1-210ENST00000558264 OR2T12Q8NG77 320 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 BPIFB1Q8TDL5 484 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 FGF13Q92913 245 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 FRG2BQ96QU4 278 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 OR4K3Q96R72 315 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 TSC22D3Q99576 134 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 CHID1Q9BWS9 393 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 SLC2A11Q9BYW1 496 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 SLC29A3Q9BZD2 475 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 CAAP1Q9H8G2 361 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 GULP1Q9UBP9 304 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 FBXO10Q9UK96 956 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 PCYT1BQ9Y5K3 369 aaPredicted RBP10.26□□□□□ -0.77
TPM1-210ENST00000558264 NUP214P35658 2090 aaPredicted RBP10.26□□□□□ -0.77
TPM1-210ENST00000558264 CXorf51AA0A1B0GTR3 108 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 TSPAN11A1L157 253 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 ARNTLO00327 626 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 DLGAP1O14490 977 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 GSTA4O15217 222 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 SLCO2B1O94956 709 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 SOD1P00441 154 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 GSTM1P09488 218 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 MYCLP1P12525 358 aaPredicted RBP10.26□□□□□ -0.77
TPM1-210ENST00000558264 ZNF23P17027 643 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 HTR1EP28566 365 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 HNMTP50135 292 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 CCT8P50990 548 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 IST1P53990 364 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 DCDC1P59894 354 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 GSTM4Q03013 218 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 MAD2L1Q13257 205 aaPredicted RBP10.26□□□□□ -0.77
TPM1-210ENST00000558264 LAPTM5Q13571 262 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 DOC2AQ14183 400 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 ZNF234Q14588 700 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 GAB4Q2WGN9 574 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 C9orf64Q5T6V5 341 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 OR4F3Q6IEY1 312 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 DOK6Q6PKX4 331 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 TBPL2Q6SJ96 375 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 OFCC1Q8IZS5 231 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 METTL25Q8N6Q8 603 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 ZNF557Q8N988 423 aaPredicted RBP10.26□□□□□ -0.77
TPM1-210ENST00000558264 FAM47BQ8NA70 645 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 LEMD2Q8NC56 503 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 MAGEE2Q8TD90 523 aaPredicted RBP10.26□□□□□ -0.77
TPM1-210ENST00000558264 CYGBQ8WWM9 190 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 NCLNQ969V3 563 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 FBXL20Q96IG2 436 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 PKP4Q99569 1192 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 STOX2Q9P2F5 926 aaPredicted RBP10.26□□□□□ -0.77
TPM1-210ENST00000558264 DEC1Q9P2X7 70 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 PCDHB14Q9Y5E9 798 aa10.26□□□□□ -0.77
TPM1-210ENST00000558264 ETHE1O95571 254 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 CLPTM1O96005 669 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 GPIP06744 558 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 C6P13671 934 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 HSPA13P48723 471 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 CDH15P55291 814 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 SLC14A1Q13336 389 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 STARD3Q14849 445 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 NKG7Q16617 165 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 KRT80Q6KB66 452 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 ETFBKMTQ8IXQ9 262 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 PLPP6Q8IY26 295 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 GPR156Q8NFN8 814 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 OR7A2PQ8NGA2 310 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 SAMD11Q96NU1 681 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 KLHL42Q9P2K6 505 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 LIMD1Q9UGP4 676 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 SH2B3Q9UQQ2 575 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 INVSQ9Y283 1065 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 TMEM98Q9Y2Y6 226 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 ALPK3Q96L96 1907 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 PLXNA2O75051 1894 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 TBC1D3BA6NDS4 549 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 LZTS3O60299 673 aaPredicted RBP10.25□□□□□ -0.77
TPM1-210ENST00000558264 TNFAIP8O95379 198 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 GBAP04062 536 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 TFAP2AP05549 437 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 SRPRAP08240 638 aaKnown RBP10.25□□□□□ -0.77
TPM1-210ENST00000558264 IMPA1P29218 277 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 S100A3P33764 101 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 GPR1P46091 355 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 PRLHRP49683 370 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 MEF2AQ02078 507 aaPredicted RBP10.25□□□□□ -0.77
TPM1-210ENST00000558264 UBE3AQ05086 875 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 SP140Q13342 867 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 NHSL2Q5HYW2 709 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 LDLRAP1Q5SW96 308 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 PPP4R4Q6NUP7 873 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 GALNT10Q86SR1 603 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 TCAIMQ8N3R3 496 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 L3MBTL4Q8NA19 623 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 PNPT1Q8TCS8 783 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms