RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 TRIM64CA6NLI5 447 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 INAFM1C9JVW0 142 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 PRSS46E5RG02 174 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 K7EPI3 171 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 TNFRSF13BO14836 293 aaPredicted RBP2.97□□□□□ -1.93
TRAV28-201ENST00000557548 MID1O15344 667 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 SMPD2O60906 423 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 FZD7O75084 574 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 RPS6KA5O75582 802 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 ATP6AP2O75787 350 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 SERPINI2O75830 405 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 C9P02748 559 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 H1F0P07305 194 aaKnown RBP2.97□□□□□ -1.93
TRAV28-201ENST00000557548 STAG3L1P0CL83 205 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 CCDC192P0DO97 292 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 IGHV4-30-4P0DP06 118 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 PRF1P14222 555 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 ETS1P14921 441 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 RPA1P27694 616 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 SFNP31947 248 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 CDX1P47902 265 aaPredicted RBP2.97□□□□□ -1.93
TRAV28-201ENST00000557548 TDO2P48775 406 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 GMFBP60983 142 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 GALK2Q01415 458 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 AKAP17AQ02040 695 aaKnown RBP2.97□□□□□ -1.93
TRAV28-201ENST00000557548 SRSF1Q07955 248 aaKnown RBP eCLIP2.97□□□□□ -1.93
TRAV28-201ENST00000557548 DMPKQ09013 629 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 ZNF415Q09FC8 603 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 ILF2Q12905 390 aaKnown RBP2.97□□□□□ -1.93
TRAV28-201ENST00000557548 FHL2Q14192 279 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 NONOQ15233 471 aaKnown RBP eCLIP2.97□□□□□ -1.93
TRAV28-201ENST00000557548 CA9Q16790 459 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 TMEM35AQ53FP2 167 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 ELFN2Q5R3F8 820 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 LRRC38Q5VT99 294 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 SUSD4Q5VX71 490 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 KCTD11Q693B1 232 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 C11orf63Q6NUN7 778 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 PLXDC2Q6UX71 529 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 MCM10Q7L590 875 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 EXOC3L1Q86VI1 746 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 AMIGO1Q86WK6 493 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 PTOV1Q86YD1 416 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 ODF3L1Q8IXM7 274 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 KLHDC8AQ8IYD2 350 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 C1orf87Q8N0U7 546 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 CRYBG2Q8N1P7 616 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 PGBD5Q8N414 524 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 RASGEF1AQ8N9B8 481 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 NPEPL1Q8NDH3 523 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 CNNM3Q8NE01 707 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 OR13J1Q8NGT2 312 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 SPATA22Q8NHS9 363 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 KIAA1524Q8TCG1 905 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 MAGEC3Q8TD91 643 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 RNF128Q8TEB7 428 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 TMEM255BQ8WV15 326 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 FAM46BQ96A09 425 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 DHX58Q96C10 678 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 PYCR2Q96C36 320 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 MTBPQ96DY7 904 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 DTD2Q96FN9 168 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 EPSTI1Q96J88 318 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 SLC25A33Q9BSK2 321 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 VN1R1Q9GZP7 353 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 CHMP4BQ9H444 224 aaKnown RBP2.97□□□□□ -1.93
TRAV28-201ENST00000557548 RIOX1Q9H6W3 641 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 Q9H8V8 135 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 TRPC7Q9HCX4 862 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 SPASTQ9UBP0 616 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 TBK1Q9UHD2 729 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 MAD2L2Q9UI95 211 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 ING1Q9UK53 422 aaPredicted RBP2.97□□□□□ -1.93
TRAV28-201ENST00000557548 AURKCQ9UQB9 309 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 OR2W1Q9Y3N9 320 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 CLCA3PQ9Y6N3 262 aa2.97□□□□□ -1.93
TRAV28-201ENST00000557548 PCSK5Q92824 1860 aa2.96□□□□□ -1.93
TRAV28-201ENST00000557548 PDS5AQ29RF7 1337 aaKnown RBP2.96□□□□□ -1.93
TRAV28-201ENST00000557548 TRAV24A0A0B4J272 114 aa2.96□□□□□ -1.94
TRAV28-201ENST00000557548 TEX13DA0A0J9YY54 714 aaPredicted RBP2.96□□□□□ -1.94
TRAV28-201ENST00000557548 A0A0U1RQJ8 604 aa2.96□□□□□ -1.94
TRAV28-201ENST00000557548 CASTOR2A6NHX0 329 aa2.96□□□□□ -1.94
TRAV28-201ENST00000557548 C15orf62A8K5M9 175 aa2.96□□□□□ -1.94
TRAV28-201ENST00000557548 ANKRD66B4E2M5 251 aa2.96□□□□□ -1.94
TRAV28-201ENST00000557548 F8VVB4 439 aa2.96□□□□□ -1.94
TRAV28-201ENST00000557548 F8VWA3 439 aa2.96□□□□□ -1.94
TRAV28-201ENST00000557548 GAPDHSO14556 408 aaPredicted RBP2.96□□□□□ -1.94
TRAV28-201ENST00000557548 NDC80O14777 642 aa2.96□□□□□ -1.94
TRAV28-201ENST00000557548 BUD23O43709 281 aaKnown RBP2.96□□□□□ -1.94
TRAV28-201ENST00000557548 WDR1O75083 606 aa2.96□□□□□ -1.94
TRAV28-201ENST00000557548 RBMXL2O75526 392 aaKnown RBP2.96□□□□□ -1.94
TRAV28-201ENST00000557548 RAD51DO75771 328 aa2.96□□□□□ -1.94
TRAV28-201ENST00000557548 GAGE7O76087 117 aa2.96□□□□□ -1.94
TRAV28-201ENST00000557548 KDM4BO94953 1096 aa2.96□□□□□ -1.94
TRAV28-201ENST00000557548 TRIM16O95361 564 aa2.96□□□□□ -1.94
TRAV28-201ENST00000557548 CLDN14O95500 239 aa2.96□□□□□ -1.94
TRAV28-201ENST00000557548 MT-ATP6P00846 226 aa2.96□□□□□ -1.94
TRAV28-201ENST00000557548 TGFAP01135 160 aa2.96□□□□□ -1.94
TRAV28-201ENST00000557548 IFNB1P01574 187 aa2.96□□□□□ -1.94
TRAV28-201ENST00000557548 SERPING1P05155 500 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms