RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 PLXNB3Q9ULL4 1909 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 KNTC1P50748 2209 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 PMS2P1A4D2B8 440 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 BTN3A3O00478 584 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 RAD1O60671 282 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 STK17BO94768 372 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 CCNDBP1O95273 360 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 AHSGP02765 367 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 CAPNS1P04632 268 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 C8GP07360 202 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 HBQ1P09105 142 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 EBLN1P0CF75 366 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 UGT2B7P16662 529 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 MCM3P25205 808 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 OAS2P29728 719 aaKnown RBP8.05□□□□□ -1.12
PSEN1-223ENST00000557511 PKLRP30613 574 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 RPA3P35244 121 aaPredicted RBP8.05□□□□□ -1.12
PSEN1-223ENST00000557511 GMPRP36959 345 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 MAGEA4P43358 317 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 BDKRB1P46663 353 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 CLCN7P51798 805 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 TUBB4BP68371 445 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 CXADRP78310 365 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 CUL1Q13616 776 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 SF1Q15637 639 aaKnown RBP8.05□□□□□ -1.12
PSEN1-223ENST00000557511 SLC5A12Q1EHB4 618 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.05□□□□□ -1.12
PSEN1-223ENST00000557511 THEMIS2Q5TEJ8 643 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 FBXO38Q6PIJ6 1188 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 C19orf48Q6RUI8 117 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 XKR5Q6UX68 686 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 C6orf15Q6UXA7 325 aaPredicted RBP8.05□□□□□ -1.12
PSEN1-223ENST00000557511 UBE2R2Q712K3 238 aaPredicted RBP8.05□□□□□ -1.12
PSEN1-223ENST00000557511 TAX1BP1Q86VP1 789 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 TMEM126BQ8IUX1 230 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 IGDCC3Q8IVU1 814 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 CTAGE3PQ8IX95 158 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 CPNE9Q8IYJ1 553 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 ADGRF3Q8IZF5 1079 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 UNC5BQ8IZJ1 945 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 NLGN4XQ8N0W4 816 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 VWA5B2Q8N398 1253 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 D2HGDHQ8N465 521 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 NKAPQ8N5F7 415 aaKnown RBP8.05□□□□□ -1.12
PSEN1-223ENST00000557511 ESX1Q8N693 406 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 C19orf47Q8N9M1 422 aaKnown RBP8.05□□□□□ -1.12
PSEN1-223ENST00000557511 NLGN4YQ8NFZ3 816 aaPredicted RBP8.05□□□□□ -1.12
PSEN1-223ENST00000557511 OR9A1PQ8NGU1 263 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 OR2L8Q8NGY9 312 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 FBXO25Q8TCJ0 367 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 DENND1AQ8TEH3 1009 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 SMPDL3AQ92484 453 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 TSPAN17Q96FV3 270 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 UCN2Q96RP3 112 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 NDNQ99608 321 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 GRHL1Q9NZI5 618 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 SEMA5BQ9P283 1151 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 VWA7Q9Y334 891 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 NFS1Q9Y697 457 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 MYLKQ15746 1914 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 ACACBO00763 2458 aa8.05□□□□□ -1.12
PSEN1-223ENST00000557511 ZFC3H1O60293 1989 aaKnown RBP8.04□□□□□ -1.12
PSEN1-223ENST00000557511 ESYT3A0FGR9 886 aa8.04□□□□□ -1.12
PSEN1-223ENST00000557511 TMEM150CB9EJG8 249 aa8.04□□□□□ -1.12
PSEN1-223ENST00000557511 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.04□□□□□ -1.12
PSEN1-223ENST00000557511 SLC16A5O15375 505 aa8.04□□□□□ -1.12
PSEN1-223ENST00000557511 CPNE3O75131 537 aaKnown RBP8.04□□□□□ -1.12
PSEN1-223ENST00000557511 PSIP1O75475 530 aaKnown RBP8.04□□□□□ -1.12
PSEN1-223ENST00000557511 SCRG1O75711 98 aa8.04□□□□□ -1.12
PSEN1-223ENST00000557511 KIAA0754O94854 1291 aa8.04□□□□□ -1.12
PSEN1-223ENST00000557511 MATN4O95460 622 aa8.04□□□□□ -1.12
PSEN1-223ENST00000557511 KLK3P07288 261 aaPredicted RBP8.04□□□□□ -1.12
PSEN1-223ENST00000557511 FGF5P12034 268 aa8.04□□□□□ -1.12
PSEN1-223ENST00000557511 ITPKBP27987 946 aa8.04□□□□□ -1.12
PSEN1-223ENST00000557511 CMPK1P30085 196 aa8.04□□□□□ -1.12
PSEN1-223ENST00000557511 SSTR1P30872 391 aa8.04□□□□□ -1.12
PSEN1-223ENST00000557511 SPRP35270 261 aaPredicted RBP8.04□□□□□ -1.12
PSEN1-223ENST00000557511 PPP1CAP62136 330 aa8.04□□□□□ -1.12
PSEN1-223ENST00000557511 MC1RQ01726 317 aa8.04□□□□□ -1.12
PSEN1-223ENST00000557511 TLE3Q04726 772 aa8.04□□□□□ -1.12
PSEN1-223ENST00000557511 SP140Q13342 867 aa8.04□□□□□ -1.12
PSEN1-223ENST00000557511 NAB1Q13506 487 aa8.04□□□□□ -1.12
PSEN1-223ENST00000557511 MAP7Q14244 749 aa8.04□□□□□ -1.12
PSEN1-223ENST00000557511 ARHGAP19Q14CB8 494 aa8.04□□□□□ -1.12
PSEN1-223ENST00000557511 FASTKD3Q14CZ7 662 aaKnown RBP8.04□□□□□ -1.12
PSEN1-223ENST00000557511 COL28A1Q2UY09 1125 aa8.04□□□□□ -1.12
PSEN1-223ENST00000557511 ZC3H12BQ5HYM0 836 aaKnown RBP8.04□□□□□ -1.12
PSEN1-223ENST00000557511 LCE2AQ5TA79 106 aaPredicted RBP8.04□□□□□ -1.12
PSEN1-223ENST00000557511 HECTD2Q5U5R9 776 aa8.04□□□□□ -1.12
PSEN1-223ENST00000557511 ZNF549Q6P9A3 640 aa8.04□□□□□ -1.12
PSEN1-223ENST00000557511 TRMT10BQ6PF06 316 aaKnown RBP8.04□□□□□ -1.12
PSEN1-223ENST00000557511 GPR155Q7Z3F1 870 aa8.04□□□□□ -1.12
PSEN1-223ENST00000557511 IFT20Q8IY31 132 aa8.04□□□□□ -1.12
PSEN1-223ENST00000557511 SYTL1Q8IYJ3 562 aa8.04□□□□□ -1.12
PSEN1-223ENST00000557511 C2orf73Q8N5S3 287 aaPredicted RBP8.04□□□□□ -1.12
PSEN1-223ENST00000557511 BMPERQ8N8U9 685 aa8.04□□□□□ -1.12
PSEN1-223ENST00000557511 CD200R1Q8TD46 325 aa8.04□□□□□ -1.12
PSEN1-223ENST00000557511 ATL1Q8WXF7 558 aa8.04□□□□□ -1.12
PSEN1-223ENST00000557511 CLIP3Q96DZ5 547 aa8.04□□□□□ -1.12
PSEN1-223ENST00000557511 LINGO1Q96FE5 620 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms